RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	RNF213	Q63HN8	5207 aa		11.53	□□□□□ -0.56
RAP1B-222	ENST00000540781		Q6ZRX8	168 aa		11.53	□□□□□ -0.56
RAP1B-222	ENST00000540781	SPANXC	Q9NY87	97 aa		11.53	□□□□□ -0.56
RAP1B-222	ENST00000540781	ERC2-IT1	O76042	136 aa		11.52	□□□□□ -0.57
RAP1B-222	ENST00000540781	CTAG1A	P78358	180 aa		11.51	□□□□□ -0.57
RAP1B-222	ENST00000540781	GAGE2A	Q6NT46	116 aa		11.51	□□□□□ -0.57
RAP1B-222	ENST00000540781	RETNLB	Q9BQ08	111 aa		11.51	□□□□□ -0.57
RAP1B-222	ENST00000540781		Q9BRP9	147 aa		11.51	□□□□□ -0.57
RAP1B-222	ENST00000540781	ZNF73	O43830	326 aa	Predicted RBP	11.5	□□□□□ -0.57
RAP1B-222	ENST00000540781	S100A1	P23297	94 aa		11.5	□□□□□ -0.57
RAP1B-222	ENST00000540781	LINC00483	Q53H64	154 aa		11.5	□□□□□ -0.57
RAP1B-222	ENST00000540781	CBY1	Q9Y3M2	126 aa		11.5	□□□□□ -0.57
RAP1B-222	ENST00000540781	JOSD1	Q15040	202 aa	Predicted RBP	11.49	□□□□□ -0.57
RAP1B-222	ENST00000540781	ANKRD39	Q53RE8	183 aa		11.49	□□□□□ -0.57
RAP1B-222	ENST00000540781	SPAG11A	Q6PDA7	123 aa		11.49	□□□□□ -0.57
RAP1B-222	ENST00000540781	ATOH7	Q8N100	152 aa		11.49	□□□□□ -0.57
RAP1B-222	ENST00000540781	OR13C6P	Q8NH95	151 aa		11.49	□□□□□ -0.57
RAP1B-222	ENST00000540781	SCGB1D4	Q6XE38	83 aa		11.48	□□□□□ -0.57
RAP1B-222	ENST00000540781	AKR1D1	P51857	326 aa		11.47	□□□□□ -0.57
RAP1B-222	ENST00000540781	C4orf48	Q5BLP8	95 aa		11.47	□□□□□ -0.57
RAP1B-222	ENST00000540781	HINT1	P49773	126 aa	Predicted RBP	11.46	□□□□□ -0.57
RAP1B-222	ENST00000540781		Q8NBF4	154 aa		11.46	□□□□□ -0.57
RAP1B-222	ENST00000540781	SPANXD	Q9BXN6	97 aa		11.45	□□□□□ -0.58
RAP1B-222	ENST00000540781	LINC00518	Q8N0U6	118 aa		11.44	□□□□□ -0.58
RAP1B-222	ENST00000540781	HIST3H2BB	Q8N257	126 aa		11.43	□□□□□ -0.58
RAP1B-222	ENST00000540781	IGLV9-49	A0A0B4J1Y8	123 aa		11.42	□□□□□ -0.58
RAP1B-222	ENST00000540781	S100A2	P29034	98 aa		11.42	□□□□□ -0.58
RAP1B-222	ENST00000540781	PCP2	Q8IVA1	136 aa		11.41	□□□□□ -0.58
RAP1B-222	ENST00000540781	COPS9	Q8WXC6	57 aa		11.41	□□□□□ -0.58
RAP1B-222	ENST00000540781	HIST1H2BL	Q99880	126 aa		11.41	□□□□□ -0.58
RAP1B-222	ENST00000540781	IGLV7-46	A0A075B6I9	117 aa		11.4	□□□□□ -0.58
RAP1B-222	ENST00000540781	SNRPE	P62304	92 aa	Known RBP	11.4	□□□□□ -0.58
RAP1B-222	ENST00000540781	MOBP	Q13875	183 aa		11.4	□□□□□ -0.58
RAP1B-222	ENST00000540781	IFITM1	P13164	125 aa		11.39	□□□□□ -0.59
RAP1B-222	ENST00000540781	SSBP3-AS1	Q7Z2R9	100 aa		11.39	□□□□□ -0.59
RAP1B-222	ENST00000540781	ST20-AS1	Q8NBB2	130 aa		11.39	□□□□□ -0.59
RAP1B-222	ENST00000540781		Q6ZVH6	145 aa		11.38	□□□□□ -0.59
RAP1B-222	ENST00000540781	C5orf52	A6NGY3	159 aa		11.37	□□□□□ -0.59
RAP1B-222	ENST00000540781	SPINK1	P00995	79 aa		11.37	□□□□□ -0.59
RAP1B-222	ENST00000540781	S100A6	P06703	90 aa		11.37	□□□□□ -0.59
RAP1B-222	ENST00000540781	MUSTN1	Q8IVN3	82 aa		11.36	□□□□□ -0.59
RAP1B-222	ENST00000540781	DHRS4-AS1	Q9P1J3	65 aa		11.36	□□□□□ -0.59
RAP1B-222	ENST00000540781	COX7B	P24311	80 aa		11.35	□□□□□ -0.59
RAP1B-222	ENST00000540781	C6orf99	Q4VX62	202 aa		11.35	□□□□□ -0.59
RAP1B-222	ENST00000540781	HSBP1L1	C9JCN9	74 aa		11.33	□□□□□ -0.6
RAP1B-222	ENST00000540781	ELOF1	P60002	83 aa	Known RBP	11.33	□□□□□ -0.6
RAP1B-222	ENST00000540781	TPRXL	Q17RH7	258 aa		11.33	□□□□□ -0.6
RAP1B-222	ENST00000540781	C9orf153	Q5TBE3	101 aa		11.33	□□□□□ -0.6
RAP1B-222	ENST00000540781		A6NDN8	102 aa		11.32	□□□□□ -0.6
RAP1B-222	ENST00000540781	CDIP1	Q9H305	208 aa		11.32	□□□□□ -0.6
RAP1B-222	ENST00000540781	FP248	Q71RG6	208 aa	Predicted RBP	11.31	□□□□□ -0.6
RAP1B-222	ENST00000540781	SPRR1B	P22528	89 aa		11.3	□□□□□ -0.6
RAP1B-222	ENST00000540781	TRBV7-6	A0A0J9YX20	115 aa		11.28	□□□□□ -0.6
RAP1B-222	ENST00000540781	RPS29	P62273	56 aa	Known RBP	11.28	□□□□□ -0.6
RAP1B-222	ENST00000540781	SLC25A34	Q6PIV7	304 aa		11.28	□□□□□ -0.6
RAP1B-222	ENST00000540781	TRAV13-2	A0A0B4J235	113 aa		11.26	□□□□□ -0.61
RAP1B-222	ENST00000540781		A0A1B0GWB2	263 aa		11.25	□□□□□ -0.61
RAP1B-222	ENST00000540781	SCGB1D1	O95968	90 aa		11.25	□□□□□ -0.61
RAP1B-222	ENST00000540781	TAL2	Q16559	108 aa		11.25	□□□□□ -0.61
RAP1B-222	ENST00000540781	LAMTOR3	Q9UHA4	124 aa		11.25	□□□□□ -0.61
RAP1B-222	ENST00000540781		Q8N377	158 aa		11.24	□□□□□ -0.61
RAP1B-222	ENST00000540781	SLC25A20	O43772	301 aa		11.23	□□□□□ -0.61
RAP1B-222	ENST00000540781	DEFB105A	Q8NG35	78 aa		11.23	□□□□□ -0.61
RAP1B-222	ENST00000540781	SMIM11B	Q8TCY0	68 aa		11.21	□□□□□ -0.61
RAP1B-222	ENST00000540781	TEX49	A0A1B0GTD5	131 aa		11.2	□□□□□ -0.62
RAP1B-222	ENST00000540781		A4D1N5	150 aa		11.19	□□□□□ -0.62
RAP1B-222	ENST00000540781		Q1RN00	199 aa		11.19	□□□□□ -0.62
RAP1B-222	ENST00000540781	KRTAP13-3	Q3SY46	172 aa		11.19	□□□□□ -0.62
RAP1B-222	ENST00000540781	NHP2	Q9NX24	153 aa	Known RBP	11.16	□□□□□ -0.62
RAP1B-222	ENST00000540781	HRCT1	Q6UXD1	115 aa		11.15	□□□□□ -0.62
RAP1B-222	ENST00000540781	MUC17	Q685J3	4493 aa		11.14	□□□□□ -0.63
RAP1B-222	ENST00000540781	IGLV5-48	A0A075B6I7	105 aa		11.14	□□□□□ -0.63
RAP1B-222	ENST00000540781	COX8A	P10176	69 aa		11.14	□□□□□ -0.63
RAP1B-222	ENST00000540781	LINC01547	P58512	204 aa	Predicted RBP	11.14	□□□□□ -0.63
RAP1B-222	ENST00000540781	VAMP3	Q15836	100 aa		11.14	□□□□□ -0.63
RAP1B-222	ENST00000540781	PRO1933	Q9H354	126 aa		11.14	□□□□□ -0.63
RAP1B-222	ENST00000540781	MUC2	Q02817	5179 aa		11.13	□□□□□ -0.63
RAP1B-222	ENST00000540781		A0A0U1RQV1	116 aa		11.13	□□□□□ -0.63
RAP1B-222	ENST00000540781	SMIM29	Q86T20	159 aa		11.13	□□□□□ -0.63
RAP1B-222	ENST00000540781	HIST1H4G	Q99525	98 aa		11.13	□□□□□ -0.63
RAP1B-222	ENST00000540781	LIMD2	Q9BT23	127 aa		11.12	□□□□□ -0.63
RAP1B-222	ENST00000540781	DLEU1	O43261	78 aa		11.1	□□□□□ -0.63
RAP1B-222	ENST00000540781	CD164	Q04900	197 aa		11.09	□□□□□ -0.63
RAP1B-222	ENST00000540781	C12orf57	Q99622	126 aa		11.09	□□□□□ -0.63
RAP1B-222	ENST00000540781	LINC00575	Q6W349	94 aa		11.08	□□□□□ -0.64
RAP1B-222	ENST00000540781		H7C2G1	150 aa		11.07	□□□□□ -0.64
RAP1B-222	ENST00000540781	C14orf144	Q96I85	54 aa		11.07	□□□□□ -0.64
RAP1B-222	ENST00000540781	SPATA45	Q537H7	98 aa		11.06	□□□□□ -0.64
RAP1B-222	ENST00000540781	PAM16	Q9Y3D7	125 aa		11.06	□□□□□ -0.64
RAP1B-222	ENST00000540781	hADV29S1	A0JD25	119 aa		11.04	□□□□□ -0.64
RAP1B-222	ENST00000540781		A0A0G2JQZ4	141 aa		11.03	□□□□□ -0.64
RAP1B-222	ENST00000540781	ASB16-AS1	Q495Z4	193 aa		11.03	□□□□□ -0.64
RAP1B-222	ENST00000540781	VAMP8	Q9BV40	100 aa		11.03	□□□□□ -0.64
RAP1B-222	ENST00000540781		Q6ZQY7	126 aa		11.02	□□□□□ -0.65
RAP1B-222	ENST00000540781	HIGD1B	Q9P298	99 aa		11.02	□□□□□ -0.65
RAP1B-222	ENST00000540781		F8WEM9	126 aa		11.01	□□□□□ -0.65
RAP1B-222	ENST00000540781	SEC61B	P60468	96 aa	Known RBP	11	□□□□□ -0.65
RAP1B-222	ENST00000540781	BVES-AS1	Q5T3Y7	98 aa		11	□□□□□ -0.65
RAP1B-222	ENST00000540781	CFC1B	P0CG36	223 aa		10.98	□□□□□ -0.65
RAP1B-222	ENST00000540781	CFC1	P0CG37	223 aa		10.98	□□□□□ -0.65

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