RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 SPCS1Q9Y6A9 102 aa6.69□□□□□ -1.34
ATL3-204ENST00000540699 FAM168BA1KXE4 195 aa6.68□□□□□ -1.34
ATL3-204ENST00000540699 M0R378 163 aa6.68□□□□□ -1.34
ATL3-204ENST00000540699 PSMB2P49721 201 aa6.68□□□□□ -1.34
ATL3-204ENST00000540699 HAMPP81172 84 aa6.68□□□□□ -1.34
ATL3-204ENST00000540699 LYRM7Q5U5X0 104 aa6.68□□□□□ -1.34
ATL3-204ENST00000540699 Q5VSD8 79 aa6.68□□□□□ -1.34
ATL3-204ENST00000540699 LINC00474Q9P2X8 69 aa6.68□□□□□ -1.34
ATL3-204ENST00000540699 PKHD1L1Q86WI1 4243 aa6.68□□□□□ -1.34
ATL3-204ENST00000540699 TRBV10-3A0A0K0K1G6 114 aa6.67□□□□□ -1.34
ATL3-204ENST00000540699 GAGE10A6NGK3 116 aa6.67□□□□□ -1.34
ATL3-204ENST00000540699 UBE2V1Q13404 147 aa6.67□□□□□ -1.34
ATL3-204ENST00000540699 PLAC8Q9NZF1 115 aa6.67□□□□□ -1.34
ATL3-204ENST00000540699 A0A087WYN8 130 aa6.66□□□□□ -1.34
ATL3-204ENST00000540699 TCL1BO95988 128 aa6.66□□□□□ -1.34
ATL3-204ENST00000540699 SMR3BP02814 79 aaPredicted RBP6.66□□□□□ -1.34
ATL3-204ENST00000540699 COX6CP09669 75 aa6.66□□□□□ -1.34
ATL3-204ENST00000540699 S100A7L2Q5SY68 101 aa6.66□□□□□ -1.34
ATL3-204ENST00000540699 C7orf33Q8WU49 177 aa6.66□□□□□ -1.34
ATL3-204ENST00000540699 TRBV20-1A0A075B6N2 111 aa6.65□□□□□ -1.34
ATL3-204ENST00000540699 IGKV2-24A0A0C4DH68 120 aa6.65□□□□□ -1.34
ATL3-204ENST00000540699 A0A1W2PNN7 141 aa6.65□□□□□ -1.34
ATL3-204ENST00000540699 SCGB1C2P0DMR2 95 aa6.65□□□□□ -1.34
ATL3-204ENST00000540699 GTF2H5Q6ZYL4 71 aa6.65□□□□□ -1.34
ATL3-204ENST00000540699 NKAPP1Q8N9T2 125 aa6.65□□□□□ -1.34
ATL3-204ENST00000540699 FAM19A5Q7Z5A7 132 aaPredicted RBP6.64□□□□□ -1.35
ATL3-204ENST00000540699 C22orf24Q9Y442 160 aa6.64□□□□□ -1.35
ATL3-204ENST00000540699 TRAV23DV6A0A075B6W5 121 aa6.63□□□□□ -1.35
ATL3-204ENST00000540699 FAM229AH3BQW9 127 aa6.63□□□□□ -1.35
ATL3-204ENST00000540699 LST1O00453 97 aa6.63□□□□□ -1.35
ATL3-204ENST00000540699 CLEC2BQ92478 149 aa6.63□□□□□ -1.35
ATL3-204ENST00000540699 FAM218AQ96MZ4 157 aa6.63□□□□□ -1.35
ATL3-204ENST00000540699 IGLV1-50A0A075B6I6 118 aa6.62□□□□□ -1.35
ATL3-204ENST00000540699 H3BMG7 143 aa6.62□□□□□ -1.35
ATL3-204ENST00000540699 ATXN8Q156A1 80 aa6.62□□□□□ -1.35
ATL3-204ENST00000540699 C6orf99Q4VX62 202 aa6.62□□□□□ -1.35
ATL3-204ENST00000540699 MRPL55Q7Z7F7 128 aaKnown RBP6.62□□□□□ -1.35
ATL3-204ENST00000540699 LINC00528Q8N1L1 170 aa6.62□□□□□ -1.35
ATL3-204ENST00000540699 LINC00167Q96N53 147 aa6.62□□□□□ -1.35
ATL3-204ENST00000540699 KCNQ1DNQ9H478 68 aa6.62□□□□□ -1.35
ATL3-204ENST00000540699 PRO0461Q9UI25 63 aa6.62□□□□□ -1.35
ATL3-204ENST00000540699 H0YGX0 51 aa6.61□□□□□ -1.35
ATL3-204ENST00000540699 M0QXV9 152 aa6.61□□□□□ -1.35
ATL3-204ENST00000540699 DPH3Q96FX2 82 aa6.61□□□□□ -1.35
ATL3-204ENST00000540699 CBY1Q9Y3M2 126 aa6.61□□□□□ -1.35
ATL3-204ENST00000540699 PRYO14603 147 aa6.6□□□□□ -1.35
ATL3-204ENST00000540699 ZNF73O43830 326 aaPredicted RBP6.6□□□□□ -1.35
ATL3-204ENST00000540699 SPRR1AP35321 89 aa6.6□□□□□ -1.35
ATL3-204ENST00000540699 KRTAP10-4P60372 401 aaPredicted RBP6.6□□□□□ -1.35
ATL3-204ENST00000540699 DIRC1Q969H9 104 aa6.6□□□□□ -1.35
ATL3-204ENST00000540699 TRBV7-6A0A0J9YX20 115 aa6.59□□□□□ -1.35
ATL3-204ENST00000540699 TRACP01848 142 aa6.59□□□□□ -1.35
ATL3-204ENST00000540699 A0A1B0GX51 115 aa6.58□□□□□ -1.36
ATL3-204ENST00000540699 RPL37AP8A6NKH3 93 aa6.58□□□□□ -1.36
ATL3-204ENST00000540699 KRTAP4-16G5E9R7 235 aaPredicted RBP6.58□□□□□ -1.36
ATL3-204ENST00000540699 ELOF1P60002 83 aaKnown RBP6.58□□□□□ -1.36
ATL3-204ENST00000540699 LCE2DQ5TA82 110 aaPredicted RBP6.58□□□□□ -1.36
ATL3-204ENST00000540699 PHF5AQ7RTV0 110 aaKnown RBP6.58□□□□□ -1.36
ATL3-204ENST00000540699 LINC01600Q96MT4 127 aa6.58□□□□□ -1.36
ATL3-204ENST00000540699 PLA2G1BP04054 148 aaKnown RBP6.57□□□□□ -1.36
ATL3-204ENST00000540699 SMCPP49901 116 aaPredicted RBP6.57□□□□□ -1.36
ATL3-204ENST00000540699 LINC00575Q6W349 94 aa6.57□□□□□ -1.36
ATL3-204ENST00000540699 C9JAW5 83 aa6.56□□□□□ -1.36
ATL3-204ENST00000540699 F8W1H4 67 aa6.56□□□□□ -1.36
ATL3-204ENST00000540699 J3QL48 77 aa6.56□□□□□ -1.36
ATL3-204ENST00000540699 COX7BP24311 80 aa6.56□□□□□ -1.36
ATL3-204ENST00000540699 KRTAP11-1Q8IUC1 163 aa6.56□□□□□ -1.36
ATL3-204ENST00000540699 MTURNQ8N3F0 131 aa6.56□□□□□ -1.36
ATL3-204ENST00000540699 RPL37AP61513 92 aaKnown RBP6.55□□□□□ -1.36
ATL3-204ENST00000540699 B5MCH6 92 aa6.54□□□□□ -1.36
ATL3-204ENST00000540699 H3BT86 120 aa6.54□□□□□ -1.36
ATL3-204ENST00000540699 SLC25A20O43772 301 aa6.54□□□□□ -1.36
ATL3-204ENST00000540699 REG3GQ6UW15 175 aa6.54□□□□□ -1.36
ATL3-204ENST00000540699 LRP1Q07954 4544 aaKnown RBP6.54□□□□□ -1.36
ATL3-204ENST00000540699 FAT3Q8TDW7 4589 aa6.53□□□□□ -1.36
ATL3-204ENST00000540699 HMCN2Q8NDA2 5059 aa6.52□□□□□ -1.37
ATL3-204ENST00000540699 hADV29S1A0JD25 119 aa6.52□□□□□ -1.37
ATL3-204ENST00000540699 Q6ZRX8 168 aa6.52□□□□□ -1.37
ATL3-204ENST00000540699 ETDCA0A1B0GVM5 59 aa6.51□□□□□ -1.37
ATL3-204ENST00000540699 DNAL4O96015 105 aa6.51□□□□□ -1.37
ATL3-204ENST00000540699 UBE2BP63146 152 aa6.51□□□□□ -1.37
ATL3-204ENST00000540699 ANKRD29Q8N6D5 301 aa6.51□□□□□ -1.37
ATL3-204ENST00000540699 Q9BRP9 147 aa6.51□□□□□ -1.37
ATL3-204ENST00000540699 KRTAP29-1A8MX34 341 aaPredicted RBP6.5□□□□□ -1.37
ATL3-204ENST00000540699 PSORS1C2Q9UIG4 136 aa6.5□□□□□ -1.37
ATL3-204ENST00000540699 BAALC-AS2P0C853 105 aa6.49□□□□□ -1.37
ATL3-204ENST00000540699 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.49□□□□□ -1.37
ATL3-204ENST00000540699 ORMDL1Q9P0S3 153 aa6.49□□□□□ -1.37
ATL3-204ENST00000540699 DHRS4-AS1Q9P1J3 65 aa6.49□□□□□ -1.37
ATL3-204ENST00000540699 H0Y9J4 135 aa6.48□□□□□ -1.37
ATL3-204ENST00000540699 SNCGO76070 127 aa6.48□□□□□ -1.37
ATL3-204ENST00000540699 ETDBQ3ZM63 59 aa6.48□□□□□ -1.37
ATL3-204ENST00000540699 Q6ZQY7 126 aa6.48□□□□□ -1.37
ATL3-204ENST00000540699 KRTAP13-1Q8IUC0 172 aa6.48□□□□□ -1.37
ATL3-204ENST00000540699 SMCR5Q8TEV8 140 aa6.48□□□□□ -1.37
ATL3-204ENST00000540699 BCE1O60756 84 aa6.47□□□□□ -1.37
ATL3-204ENST00000540699 FAM19A1Q7Z5A9 133 aa6.47□□□□□ -1.37
ATL3-204ENST00000540699 TEN1Q86WV5 123 aa6.47□□□□□ -1.37
ATL3-204ENST00000540699 PRLHP81277 87 aa6.46□□□□□ -1.38
ATL3-204ENST00000540699 ERC2-IT1O76042 136 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms