RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.15□□□□□ -0.62
EPB41L3-204ENST00000540638 GHRHP01286 108 aa11.14□□□□□ -0.63
EPB41L3-204ENST00000540638 HIGD2AQ9BW72 106 aa11.14□□□□□ -0.63
EPB41L3-204ENST00000540638 Q6ZQT0 140 aa11.14□□□□□ -0.63
EPB41L3-204ENST00000540638 OBSCN-AS1Q96MR7 158 aa11.14□□□□□ -0.63
EPB41L3-204ENST00000540638 LINC00167Q96N53 147 aa11.13□□□□□ -0.63
EPB41L3-204ENST00000540638 CSMD3Q7Z407 3707 aa11.13□□□□□ -0.63
EPB41L3-204ENST00000540638 ATOX1O00244 68 aa11.12□□□□□ -0.63
EPB41L3-204ENST00000540638 Q8N9L7 120 aa11.12□□□□□ -0.63
EPB41L3-204ENST00000540638 ST20-AS1Q8NBB2 130 aa11.12□□□□□ -0.63
EPB41L3-204ENST00000540638 Q6ZVQ6 151 aa11.1□□□□□ -0.63
EPB41L3-204ENST00000540638 CHTF8P0CG12 524 aa11.1□□□□□ -0.63
EPB41L3-204ENST00000540638 SMIM20Q8N5G0 67 aa11.1□□□□□ -0.63
EPB41L3-204ENST00000540638 FUSP35637 526 aaKnown RBP eCLIP11.1□□□□□ -0.63
EPB41L3-204ENST00000540638 LINC00528Q8N1L1 170 aa11.1□□□□□ -0.63
EPB41L3-204ENST00000540638 A0A096LNI7 61 aa11.08□□□□□ -0.64
EPB41L3-204ENST00000540638 PRLHP81277 87 aa11.08□□□□□ -0.64
EPB41L3-204ENST00000540638 KRTAP1-5Q9BYS1 174 aa11.08□□□□□ -0.64
EPB41L3-204ENST00000540638 MRPL55Q7Z7F7 128 aaKnown RBP11.08□□□□□ -0.64
EPB41L3-204ENST00000540638 A0A0G2JQZ4 141 aa11.07□□□□□ -0.64
EPB41L3-204ENST00000540638 LOC107984640A0A0U1RRK4 108 aa11.07□□□□□ -0.64
EPB41L3-204ENST00000540638 A0A1W2PNN7 141 aa11.07□□□□□ -0.64
EPB41L3-204ENST00000540638 NREPQ16612 68 aa11.07□□□□□ -0.64
EPB41L3-204ENST00000540638 UQCRQO14949 82 aa11.06□□□□□ -0.64
EPB41L3-204ENST00000540638 LINC01547P58512 204 aaPredicted RBP11.06□□□□□ -0.64
EPB41L3-204ENST00000540638 COX7CP15954 63 aa11.04□□□□□ -0.64
EPB41L3-204ENST00000540638 C20orf197Q8N268 126 aa11.03□□□□□ -0.64
EPB41L3-204ENST00000540638 ERC2-IT1O76042 136 aa11.02□□□□□ -0.65
EPB41L3-204ENST00000540638 PDE6GP18545 87 aa11.02□□□□□ -0.65
EPB41L3-204ENST00000540638 KCNQ1DNQ9H478 68 aa11□□□□□ -0.65
EPB41L3-204ENST00000540638 F8WEM9 126 aa11□□□□□ -0.65
EPB41L3-204ENST00000540638 Q6ZRX8 168 aa11□□□□□ -0.65
EPB41L3-204ENST00000540638 COL7A1Q02388 2944 aa11□□□□□ -0.65
EPB41L3-204ENST00000540638 Q8N377 158 aa10.99□□□□□ -0.65
EPB41L3-204ENST00000540638 REG3GQ6UW15 175 aa10.99□□□□□ -0.65
EPB41L3-204ENST00000540638 SERP2Q8N6R1 65 aa10.99□□□□□ -0.65
EPB41L3-204ENST00000540638 IGLV1-50A0A075B6I6 118 aa10.99□□□□□ -0.65
EPB41L3-204ENST00000540638 LOC110117498A0A087WWA1 95 aa10.99□□□□□ -0.65
EPB41L3-204ENST00000540638 Q9BRP9 147 aa10.98□□□□□ -0.65
EPB41L3-204ENST00000540638 DEFB116Q30KQ4 102 aa10.97□□□□□ -0.65
EPB41L3-204ENST00000540638 DHRS4-AS1Q9P1J3 65 aa10.97□□□□□ -0.65
EPB41L3-204ENST00000540638 ATP5EP2Q5VTU8 51 aa10.97□□□□□ -0.65
EPB41L3-204ENST00000540638 PHF5AQ7RTV0 110 aaKnown RBP10.97□□□□□ -0.65
EPB41L3-204ENST00000540638 C1orf137Q5JT78 98 aa10.97□□□□□ -0.65
EPB41L3-204ENST00000540638 H3BQ85 93 aa10.96□□□□□ -0.65
EPB41L3-204ENST00000540638 BPY2O14599 106 aa10.96□□□□□ -0.65
EPB41L3-204ENST00000540638 SNURFQ9Y675 71 aa10.96□□□□□ -0.66
EPB41L3-204ENST00000540638 SRRM2Q9UQ35 2752 aaKnown RBP10.95□□□□□ -0.66
EPB41L3-204ENST00000540638 TRBV7-6A0A0J9YX20 115 aa10.95□□□□□ -0.66
EPB41L3-204ENST00000540638 TRBV7-4A0A0J9YYF1 115 aa10.95□□□□□ -0.66
EPB41L3-204ENST00000540638 F8WDY8 70 aa10.94□□□□□ -0.66
EPB41L3-204ENST00000540638 PRYO14603 147 aa10.94□□□□□ -0.66
EPB41L3-204ENST00000540638 UBE2AP49459 152 aa10.93□□□□□ -0.66
EPB41L3-204ENST00000540638 CYSTM1Q9H1C7 97 aa10.93□□□□□ -0.66
EPB41L3-204ENST00000540638 KRTAP7-1Q8IUC3 87 aa10.93□□□□□ -0.66
EPB41L3-204ENST00000540638 APLNQ9ULZ1 77 aa10.92□□□□□ -0.66
EPB41L3-204ENST00000540638 TGP01266 2768 aa10.92□□□□□ -0.66
EPB41L3-204ENST00000540638 TLX1NBP0CAT3 122 aa10.91□□□□□ -0.66
EPB41L3-204ENST00000540638 B9D2Q9BPU9 175 aa10.9□□□□□ -0.66
EPB41L3-204ENST00000540638 C16orf90A8MZG2 172 aa10.87□□□□□ -0.67
EPB41L3-204ENST00000540638 NBDYA0A0U1RRE5 68 aa10.87□□□□□ -0.67
EPB41L3-204ENST00000540638 C14orf177Q52M58 125 aa10.86□□□□□ -0.67
EPB41L3-204ENST00000540638 HUWE1Q7Z6Z7 4374 aaKnown RBP10.84□□□□□ -0.67
EPB41L3-204ENST00000540638 NUPR2A6NF83 97 aa10.84□□□□□ -0.67
EPB41L3-204ENST00000540638 A0A1W2PNM2 257 aa10.83□□□□□ -0.68
EPB41L3-204ENST00000540638 LINC00476Q8WZB0 136 aa10.82□□□□□ -0.68
EPB41L3-204ENST00000540638 A0A087WSZ3 146 aa10.82□□□□□ -0.68
EPB41L3-204ENST00000540638 LY6G6CO95867 125 aa10.81□□□□□ -0.68
EPB41L3-204ENST00000540638 CXCL6P80162 114 aa10.81□□□□□ -0.68
EPB41L3-204ENST00000540638 EPM2AB3EWF7 344 aa10.8□□□□□ -0.68
EPB41L3-204ENST00000540638 HRCT1Q6UXD1 115 aa10.8□□□□□ -0.68
EPB41L3-204ENST00000540638 LYSTQ99698 3801 aa10.8□□□□□ -0.68
EPB41L3-204ENST00000540638 FAM30AQ9NZY2 134 aa10.8□□□□□ -0.68
EPB41L3-204ENST00000540638 PLA2G2DQ9UNK4 145 aa10.8□□□□□ -0.68
EPB41L3-204ENST00000540638 CRYGAP11844 174 aa10.8□□□□□ -0.68
EPB41L3-204ENST00000540638 IGLV9-49A0A0B4J1Y8 123 aa10.79□□□□□ -0.68
EPB41L3-204ENST00000540638 PANO1I0J062 215 aa10.78□□□□□ -0.68
EPB41L3-204ENST00000540638 KRTAP11-1Q8IUC1 163 aa10.78□□□□□ -0.68
EPB41L3-204ENST00000540638 CMYA5Q8N3K9 4069 aa10.78□□□□□ -0.68
EPB41L3-204ENST00000540638 KRTAP4-16G5E9R7 235 aaPredicted RBP10.77□□□□□ -0.69
EPB41L3-204ENST00000540638 WFDC13Q8IUB5 93 aa10.77□□□□□ -0.69
EPB41L3-204ENST00000540638 Q8NBF4 154 aa10.77□□□□□ -0.69
EPB41L3-204ENST00000540638 TRAV7A0A075B6U4 112 aa10.76□□□□□ -0.69
EPB41L3-204ENST00000540638 SPRR1AP35321 89 aa10.76□□□□□ -0.69
EPB41L3-204ENST00000540638 IGLV5-37A0A075B6J1 123 aa10.76□□□□□ -0.69
EPB41L3-204ENST00000540638 DNAH10Q8IVF4 4471 aa10.75□□□□□ -0.69
EPB41L3-204ENST00000540638 CNBPP62633 177 aaKnown RBP10.74□□□□□ -0.69
EPB41L3-204ENST00000540638 C9orf163Q8N9P6 203 aa10.74□□□□□ -0.69
EPB41L3-204ENST00000540638 IGLV5-48A0A075B6I7 105 aa10.74□□□□□ -0.69
EPB41L3-204ENST00000540638 RPL37AP61513 92 aaKnown RBP10.73□□□□□ -0.69
EPB41L3-204ENST00000540638 IGFL1Q6UW32 110 aa10.73□□□□□ -0.69
EPB41L3-204ENST00000540638 SMIM29Q86T20 159 aa10.73□□□□□ -0.69
EPB41L3-204ENST00000540638 IGKV4-1P06312 121 aa10.72□□□□□ -0.69
EPB41L3-204ENST00000540638 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.71□□□□□ -0.69
EPB41L3-204ENST00000540638 K7EQZ3 153 aa10.7□□□□□ -0.7
EPB41L3-204ENST00000540638 ANAPC11Q9NYG5 84 aa10.69□□□□□ -0.7
EPB41L3-204ENST00000540638 J3KT08 172 aa10.69□□□□□ -0.7
EPB41L3-204ENST00000540638 TMEM258P61165 79 aa10.68□□□□□ -0.7
EPB41L3-204ENST00000540638 LRCOL1A6NCL2 159 aa10.68□□□□□ -0.7
EPB41L3-204ENST00000540638 H0Y9J4 135 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms