RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 SPANXDQ9BXN6 97 aa4.26□□□□□ -1.73
LPCAT3-209ENST00000540060 SPANXCQ9NY87 97 aa4.26□□□□□ -1.73
LPCAT3-209ENST00000540060 BCE1O60756 84 aa4.25□□□□□ -1.73
LPCAT3-209ENST00000540060 NDUFC2O95298 119 aa4.25□□□□□ -1.73
LPCAT3-209ENST00000540060 LINC00308Q8TCZ7 52 aa4.25□□□□□ -1.73
LPCAT3-209ENST00000540060 TMEM126AQ9H061 195 aa4.25□□□□□ -1.73
LPCAT3-209ENST00000540060 SPANXB1Q9NS25 103 aaPredicted RBP4.25□□□□□ -1.73
LPCAT3-209ENST00000540060 TRBV10-2A0A0K0K1G8 114 aa4.24□□□□□ -1.73
LPCAT3-209ENST00000540060 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
LPCAT3-209ENST00000540060 REG3GQ6UW15 175 aa4.24□□□□□ -1.73
LPCAT3-209ENST00000540060 KRTAP13-1Q8IUC0 172 aa4.24□□□□□ -1.73
LPCAT3-209ENST00000540060 TRBV10-3A0A0K0K1G6 114 aa4.23□□□□□ -1.73
LPCAT3-209ENST00000540060 H0Y9J4 135 aa4.23□□□□□ -1.73
LPCAT3-209ENST00000540060 PRYO14603 147 aa4.23□□□□□ -1.73
LPCAT3-209ENST00000540060 ZNF861PO60384 105 aa4.23□□□□□ -1.73
LPCAT3-209ENST00000540060 OXTP01178 125 aa4.23□□□□□ -1.73
LPCAT3-209ENST00000540060 COX8AP10176 69 aa4.23□□□□□ -1.73
LPCAT3-209ENST00000540060 SPATA45Q537H7 98 aa4.23□□□□□ -1.73
LPCAT3-209ENST00000540060 PYY3Q5JQD4 70 aa4.23□□□□□ -1.73
LPCAT3-209ENST00000540060 Q6ZVH6 145 aa4.23□□□□□ -1.73
LPCAT3-209ENST00000540060 DIRC1Q969H9 104 aa4.23□□□□□ -1.73
LPCAT3-209ENST00000540060 VAMP8Q9BV40 100 aa4.23□□□□□ -1.73
LPCAT3-209ENST00000540060 PPDPFQ9H3Y8 114 aa4.23□□□□□ -1.73
LPCAT3-209ENST00000540060 PAM16Q9Y3D7 125 aa4.23□□□□□ -1.73
LPCAT3-209ENST00000540060 IGLV6-57P01721 117 aa4.22□□□□□ -1.73
LPCAT3-209ENST00000540060 IFITM1P13164 125 aa4.22□□□□□ -1.73
LPCAT3-209ENST00000540060 DDTP30046 118 aa4.22□□□□□ -1.73
LPCAT3-209ENST00000540060 SPRR1AP35321 89 aa4.22□□□□□ -1.73
LPCAT3-209ENST00000540060 KCNQ1DNQ9H478 68 aa4.22□□□□□ -1.73
LPCAT3-209ENST00000540060 TNXBP22105 4242 aa4.22□□□□□ -1.73
LPCAT3-209ENST00000540060 HERC1Q15751 4861 aa4.22□□□□□ -1.73
LPCAT3-209ENST00000540060 DMBT1Q9UGM3 2413 aaPredicted RBP4.21□□□□□ -1.74
LPCAT3-209ENST00000540060 KRTAP4-16G5E9R7 235 aaPredicted RBP4.21□□□□□ -1.74
LPCAT3-209ENST00000540060 DLEU1O43261 78 aa4.21□□□□□ -1.74
LPCAT3-209ENST00000540060 RPL28P46779 137 aaKnown RBP4.21□□□□□ -1.74
LPCAT3-209ENST00000540060 UBE2AP49459 152 aa4.21□□□□□ -1.74
LPCAT3-209ENST00000540060 PRLHP81277 87 aa4.21□□□□□ -1.74
LPCAT3-209ENST00000540060 FAM19A1Q7Z5A9 133 aa4.21□□□□□ -1.74
LPCAT3-209ENST00000540060 COPS9Q8WXC6 57 aa4.21□□□□□ -1.74
LPCAT3-209ENST00000540060 KRTAP1-4P0C5Y4 121 aa4.2□□□□□ -1.74
LPCAT3-209ENST00000540060 MT1HL1P0DM35 61 aa4.2□□□□□ -1.74
LPCAT3-209ENST00000540060 S100A7L2Q5SY68 101 aa4.2□□□□□ -1.74
LPCAT3-209ENST00000540060 MUSTN1Q8IVN3 82 aa4.2□□□□□ -1.74
LPCAT3-209ENST00000540060 LINC00337Q8N6G1 96 aa4.2□□□□□ -1.74
LPCAT3-209ENST00000540060 C14orf144Q96I85 54 aa4.2□□□□□ -1.74
LPCAT3-209ENST00000540060 LINC01600Q96MT4 127 aa4.2□□□□□ -1.74
LPCAT3-209ENST00000540060 TRAV23DV6A0A075B6W5 121 aa4.19□□□□□ -1.74
LPCAT3-209ENST00000540060 S100A12P80511 92 aa4.19□□□□□ -1.74
LPCAT3-209ENST00000540060 SLC25A34Q6PIV7 304 aa4.19□□□□□ -1.74
LPCAT3-209ENST00000540060 C2orf91Q6ZV80 131 aa4.19□□□□□ -1.74
LPCAT3-209ENST00000540060 LINC00518Q8N0U6 118 aa4.19□□□□□ -1.74
LPCAT3-209ENST00000540060 ETDCA0A1B0GVM5 59 aa4.18□□□□□ -1.74
LPCAT3-209ENST00000540060 ZNF73O43830 326 aaPredicted RBP4.18□□□□□ -1.74
LPCAT3-209ENST00000540060 HIGD1BQ9P298 99 aa4.18□□□□□ -1.74
LPCAT3-209ENST00000540060 B5MCH6 92 aa4.17□□□□□ -1.74
LPCAT3-209ENST00000540060 Q6ZRX8 168 aa4.17□□□□□ -1.74
LPCAT3-209ENST00000540060 OR13C6PQ8NH95 151 aa4.17□□□□□ -1.74
LPCAT3-209ENST00000540060 SMCR5Q8TEV8 140 aa4.17□□□□□ -1.74
LPCAT3-209ENST00000540060 HIST1H4GQ99525 98 aa4.17□□□□□ -1.74
LPCAT3-209ENST00000540060 HIGD2AQ9BW72 106 aa4.17□□□□□ -1.74
LPCAT3-209ENST00000540060 CBY1Q9Y3M2 126 aa4.17□□□□□ -1.74
LPCAT3-209ENST00000540060 A4D1N5 150 aa4.16□□□□□ -1.74
LPCAT3-209ENST00000540060 KRTAP10-8P60410 259 aa4.16□□□□□ -1.74
LPCAT3-209ENST00000540060 Q9BRP9 147 aa4.16□□□□□ -1.74
LPCAT3-209ENST00000540060 A0A087X002 238 aa4.15□□□□□ -1.75
LPCAT3-209ENST00000540060 TRAV13-2A0A0B4J235 113 aa4.15□□□□□ -1.75
LPCAT3-209ENST00000540060 A6NDN8 102 aa4.15□□□□□ -1.75
LPCAT3-209ENST00000540060 SMIM6P0DI80 62 aa4.15□□□□□ -1.75
LPCAT3-209ENST00000540060 PRR26Q8N8Z3 221 aa4.15□□□□□ -1.75
LPCAT3-209ENST00000540060 ERC2-IT1O76042 136 aa4.14□□□□□ -1.75
LPCAT3-209ENST00000540060 RPL13AP40429 203 aaKnown RBP4.14□□□□□ -1.75
LPCAT3-209ENST00000540060 ELOF1P60002 83 aaKnown RBP4.14□□□□□ -1.75
LPCAT3-209ENST00000540060 TAL2Q16559 108 aa4.14□□□□□ -1.75
LPCAT3-209ENST00000540060 C6orf99Q4VX62 202 aa4.14□□□□□ -1.75
LPCAT3-209ENST00000540060 SPRR4Q96PI1 79 aa4.14□□□□□ -1.75
LPCAT3-209ENST00000540060 C12orf57Q99622 126 aa4.14□□□□□ -1.75
LPCAT3-209ENST00000540060 ZNF706Q9Y5V0 76 aaPredicted RBP4.14□□□□□ -1.75
LPCAT3-209ENST00000540060 TRBV7-6A0A0J9YX20 115 aa4.13□□□□□ -1.75
LPCAT3-209ENST00000540060 LOC105371267A0A1B0GV96 52 aa4.13□□□□□ -1.75
LPCAT3-209ENST00000540060 HINT1P49773 126 aaPredicted RBP4.13□□□□□ -1.75
LPCAT3-209ENST00000540060 FAM229BQ4G0N7 80 aa4.13□□□□□ -1.75
LPCAT3-209ENST00000540060 KRTAP13-2Q52LG2 175 aa4.13□□□□□ -1.75
LPCAT3-209ENST00000540060 CEND1Q8N111 149 aa4.13□□□□□ -1.75
LPCAT3-209ENST00000540060 SMIM11BQ8TCY0 68 aa4.13□□□□□ -1.75
LPCAT3-209ENST00000540060 ANAPC11Q9NYG5 84 aa4.13□□□□□ -1.75
LPCAT3-209ENST00000540060 A0A0B4J2C4 111 aa4.12□□□□□ -1.75
LPCAT3-209ENST00000540060 A0A1B0GWB2 263 aa4.12□□□□□ -1.75
LPCAT3-209ENST00000540060 CFC1BP0CG36 223 aa4.12□□□□□ -1.75
LPCAT3-209ENST00000540060 CFC1P0CG37 223 aa4.12□□□□□ -1.75
LPCAT3-209ENST00000540060 CRYGAP11844 174 aa4.12□□□□□ -1.75
LPCAT3-209ENST00000540060 COX7BP24311 80 aa4.12□□□□□ -1.75
LPCAT3-209ENST00000540060 HSD52Q0P140 79 aa4.12□□□□□ -1.75
LPCAT3-209ENST00000540060 LINC00483Q53H64 154 aa4.12□□□□□ -1.75
LPCAT3-209ENST00000540060 UQCR10Q9UDW1 63 aa4.12□□□□□ -1.75
LPCAT3-209ENST00000540060 HMCN2Q8NDA2 5059 aa4.12□□□□□ -1.75
LPCAT3-209ENST00000540060 FXYD2P54710 66 aa4.11□□□□□ -1.75
LPCAT3-209ENST00000540060 DHRS4-AS1Q9P1J3 65 aa4.11□□□□□ -1.75
LPCAT3-209ENST00000540060 C9orf118A6NHY6 69 aa4.1□□□□□ -1.75
LPCAT3-209ENST00000540060 C3orf22Q8N5N4 141 aa4.1□□□□□ -1.75
LPCAT3-209ENST00000540060 PRO1933Q9H354 126 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms