RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 LOC100131303A0A0U1RQF7 123 aa5.21□□□□□ -1.58
CCDC60-204ENST00000539847 OXTP01178 125 aa5.21□□□□□ -1.58
CCDC60-204ENST00000539847 PFN2P35080 140 aa5.21□□□□□ -1.58
CCDC60-204ENST00000539847 LINC00612Q8N6U2 182 aa5.21□□□□□ -1.58
CCDC60-204ENST00000539847 DSCR8Q96T75 97 aa5.21□□□□□ -1.58
CCDC60-204ENST00000539847 KRTAP17-1Q9BYP8 105 aa5.21□□□□□ -1.58
CCDC60-204ENST00000539847 HYDINQ4G0P3 5121 aa5.2□□□□□ -1.58
CCDC60-204ENST00000539847 TRBV7-6A0A0J9YX20 115 aa5.2□□□□□ -1.58
CCDC60-204ENST00000539847 H7BZZ5 65 aa5.2□□□□□ -1.58
CCDC60-204ENST00000539847 SLPIP03973 132 aa5.2□□□□□ -1.58
CCDC60-204ENST00000539847 GIG44P09565 113 aaPredicted RBP5.2□□□□□ -1.58
CCDC60-204ENST00000539847 KIAA0087Q14695 138 aa5.2□□□□□ -1.58
CCDC60-204ENST00000539847 CD164L2Q6UWJ8 174 aa5.2□□□□□ -1.58
CCDC60-204ENST00000539847 ENHOQ6UWT2 76 aa5.2□□□□□ -1.58
CCDC60-204ENST00000539847 Q75L30 129 aa5.2□□□□□ -1.58
CCDC60-204ENST00000539847 ALMS1Q8TCU4 4167 aa5.2□□□□□ -1.58
CCDC60-204ENST00000539847 C4orf26Q17RF5 130 aa5.19□□□□□ -1.58
CCDC60-204ENST00000539847 FAM19A1Q7Z5A9 133 aa5.19□□□□□ -1.58
CCDC60-204ENST00000539847 CSNK1G2-AS1Q8NCQ2 148 aa5.19□□□□□ -1.58
CCDC60-204ENST00000539847 TRAV23DV6A0A075B6W5 121 aa5.18□□□□□ -1.58
CCDC60-204ENST00000539847 C20orf197Q8N268 126 aa5.18□□□□□ -1.58
CCDC60-204ENST00000539847 PRO0628Q9UI54 55 aa5.18□□□□□ -1.58
CCDC60-204ENST00000539847 HERC2O95714 4834 aa5.17□□□□□ -1.58
CCDC60-204ENST00000539847 GVQW2A0A096LPI5 108 aaPredicted RBP5.17□□□□□ -1.58
CCDC60-204ENST00000539847 A0A0J9YWU9 116 aa5.17□□□□□ -1.58
CCDC60-204ENST00000539847 NUPR2A6NF83 97 aa5.17□□□□□ -1.58
CCDC60-204ENST00000539847 IGLV6-57P01721 117 aa5.17□□□□□ -1.58
CCDC60-204ENST00000539847 LINC01547P58512 204 aaPredicted RBP5.17□□□□□ -1.58
CCDC60-204ENST00000539847 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.17□□□□□ -1.58
CCDC60-204ENST00000539847 A0A1B0GW54 56 aa5.16□□□□□ -1.58
CCDC60-204ENST00000539847 F8WDY8 70 aa5.16□□□□□ -1.58
CCDC60-204ENST00000539847 Q6ZVQ6 151 aa5.16□□□□□ -1.58
CCDC60-204ENST00000539847 TRBV7-4A0A0J9YYF1 115 aa5.15□□□□□ -1.59
CCDC60-204ENST00000539847 C6orf99Q4VX62 202 aa5.15□□□□□ -1.59
CCDC60-204ENST00000539847 HRCT1Q6UXD1 115 aa5.15□□□□□ -1.59
CCDC60-204ENST00000539847 KRTAP19-1Q8IUB9 90 aa5.15□□□□□ -1.59
CCDC60-204ENST00000539847 PRO0255Q9UI72 69 aa5.15□□□□□ -1.59
CCDC60-204ENST00000539847 LCE3BQ5TA77 95 aa5.14□□□□□ -1.59
CCDC60-204ENST00000539847 LAMTOR3Q9UHA4 124 aa5.14□□□□□ -1.59
CCDC60-204ENST00000539847 FRAS1Q86XX4 4008 aa5.14□□□□□ -1.59
CCDC60-204ENST00000539847 IGKV3OR2-268A0A0C4DH90 116 aa5.13□□□□□ -1.59
CCDC60-204ENST00000539847 LY6G6CO95867 125 aa5.13□□□□□ -1.59
CCDC60-204ENST00000539847 RETNQ9HD89 108 aa5.13□□□□□ -1.59
CCDC60-204ENST00000539847 LYRM9A8MSI8 78 aa5.12□□□□□ -1.59
CCDC60-204ENST00000539847 HAMPP81172 84 aa5.12□□□□□ -1.59
CCDC60-204ENST00000539847 CHCHD10Q8WYQ3 142 aaPredicted RBP5.12□□□□□ -1.59
CCDC60-204ENST00000539847 PCLOQ9Y6V0 5065 aa5.12□□□□□ -1.59
CCDC60-204ENST00000539847 KMT2AQ03164 3969 aa5.11□□□□□ -1.59
CCDC60-204ENST00000539847 TRAV10A0A0B4J240 114 aa5.11□□□□□ -1.59
CCDC60-204ENST00000539847 MIFP14174 115 aa5.11□□□□□ -1.59
CCDC60-204ENST00000539847 KRTAP10-2P60368 255 aa5.11□□□□□ -1.59
CCDC60-204ENST00000539847 PRR3P79522 188 aaKnown RBP5.11□□□□□ -1.59
CCDC60-204ENST00000539847 Q8N1X5 172 aa5.11□□□□□ -1.59
CCDC60-204ENST00000539847 CELA1Q9UNI1 258 aa5.11□□□□□ -1.59
CCDC60-204ENST00000539847 COX7BP24311 80 aa5.1□□□□□ -1.59
CCDC60-204ENST00000539847 APOC4P55056 127 aa5.1□□□□□ -1.59
CCDC60-204ENST00000539847 MPLKIPQ8TAP9 179 aa5.1□□□□□ -1.59
CCDC60-204ENST00000539847 DIRC1Q969H9 104 aa5.1□□□□□ -1.59
CCDC60-204ENST00000539847 DNAH10Q8IVF4 4471 aa5.1□□□□□ -1.59
CCDC60-204ENST00000539847 F8WEM9 126 aa5.09□□□□□ -1.59
CCDC60-204ENST00000539847 REG3AQ06141 175 aa5.09□□□□□ -1.59
CCDC60-204ENST00000539847 RYR1P21817 5038 aa5.09□□□□□ -1.59
CCDC60-204ENST00000539847 KIAA1109Q2LD37 5005 aa5.09□□□□□ -1.6
CCDC60-204ENST00000539847 HECTD4Q9Y4D8 3996 aa5.09□□□□□ -1.6
CCDC60-204ENST00000539847 RPL35AP18077 110 aaKnown RBP5.08□□□□□ -1.6
CCDC60-204ENST00000539847 ELOF1P60002 83 aaKnown RBP5.08□□□□□ -1.6
CCDC60-204ENST00000539847 Q6ZQY7 126 aa5.08□□□□□ -1.6
CCDC60-204ENST00000539847 LINC00336Q6ZUF6 198 aa5.08□□□□□ -1.6
CCDC60-204ENST00000539847 FP248Q71RG6 208 aaPredicted RBP5.08□□□□□ -1.6
CCDC60-204ENST00000539847 LINC00269Q8N2A0 174 aa5.08□□□□□ -1.6
CCDC60-204ENST00000539847 PRR34Q9NV39 138 aa5.08□□□□□ -1.6
CCDC60-204ENST00000539847 A0A0U1RQV1 116 aa5.07□□□□□ -1.6
CCDC60-204ENST00000539847 M0R378 163 aa5.07□□□□□ -1.6
CCDC60-204ENST00000539847 BPY2O14599 106 aa5.07□□□□□ -1.6
CCDC60-204ENST00000539847 ZNF73O43830 326 aaPredicted RBP5.07□□□□□ -1.6
CCDC60-204ENST00000539847 SPAG11BQ08648 103 aa5.07□□□□□ -1.6
CCDC60-204ENST00000539847 NREPQ16612 68 aa5.07□□□□□ -1.6
CCDC60-204ENST00000539847 C10orf25Q5T742 122 aa5.07□□□□□ -1.6
CCDC60-204ENST00000539847 TMEM254Q8TBM7 123 aa5.07□□□□□ -1.6
CCDC60-204ENST00000539847 RMI2Q96E14 147 aa5.07□□□□□ -1.6
CCDC60-204ENST00000539847 WFDC10AQ9H1F0 79 aa5.07□□□□□ -1.6
CCDC60-204ENST00000539847 C11orf68Q9H3H3 251 aaKnown RBP5.07□□□□□ -1.6
CCDC60-204ENST00000539847 DEFB130BP0DP73 79 aa5.06□□□□□ -1.6
CCDC60-204ENST00000539847 DEFB130AP0DP74 79 aa5.06□□□□□ -1.6
CCDC60-204ENST00000539847 LELP1Q5T871 98 aa5.06□□□□□ -1.6
CCDC60-204ENST00000539847 UNQ6190/PRO20217Q6UXQ8 127 aa5.06□□□□□ -1.6
CCDC60-204ENST00000539847 Q8NDZ9 215 aa5.06□□□□□ -1.6
CCDC60-204ENST00000539847 OCR1Q9BZK8 76 aa5.06□□□□□ -1.6
CCDC60-204ENST00000539847 M0R2N4 97 aa5.05□□□□□ -1.6
CCDC60-204ENST00000539847 ANGP03950 147 aaKnown RBP5.05□□□□□ -1.6
CCDC60-204ENST00000539847 KRTAP4-12Q9BQ66 201 aa5.05□□□□□ -1.6
CCDC60-204ENST00000539847 SNURFQ9Y675 71 aa5.05□□□□□ -1.6
CCDC60-204ENST00000539847 VPS13DQ5THJ4 4388 aa5.05□□□□□ -1.6
CCDC60-204ENST00000539847 DEFB135Q30KP9 77 aa5.04□□□□□ -1.6
CCDC60-204ENST00000539847 C9orf116Q5BN46 136 aaPredicted RBP5.04□□□□□ -1.6
CCDC60-204ENST00000539847 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
CCDC60-204ENST00000539847 IGKV4-1P06312 121 aa5.03□□□□□ -1.6
CCDC60-204ENST00000539847 Q6ZTC4 211 aa5.03□□□□□ -1.6
CCDC60-204ENST00000539847 KRTAP9-9Q9BYP9 154 aa5.03□□□□□ -1.6
CCDC60-204ENST00000539847 KRTAP9-4Q9BYQ2 154 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms