RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 XP32Q5T750 250 aa9.59□□□□□ -0.87
DDB1-215ENST00000539712 Q9BRP9 147 aa9.59□□□□□ -0.87
DDB1-215ENST00000539712 PPDPFQ9H3Y8 114 aa9.59□□□□□ -0.87
DDB1-215ENST00000539712 SPANXB1Q9NS25 103 aaPredicted RBP9.59□□□□□ -0.87
DDB1-215ENST00000539712 LINC01545Q5VT33 79 aa9.57□□□□□ -0.88
DDB1-215ENST00000539712 SPAG11AQ6PDA7 123 aa9.57□□□□□ -0.88
DDB1-215ENST00000539712 LITAFQ99732 161 aa9.57□□□□□ -0.88
DDB1-215ENST00000539712 IGLV7-46A0A075B6I9 117 aa9.56□□□□□ -0.88
DDB1-215ENST00000539712 TPRXLQ17RH7 258 aa9.56□□□□□ -0.88
DDB1-215ENST00000539712 Q6ZRX8 168 aa9.56□□□□□ -0.88
DDB1-215ENST00000539712 Q8NBF4 154 aa9.56□□□□□ -0.88
DDB1-215ENST00000539712 FAT4Q6V0I7 4981 aa9.55□□□□□ -0.88
DDB1-215ENST00000539712 NPC2P61916 151 aa9.55□□□□□ -0.88
DDB1-215ENST00000539712 MIEN1Q9BRT3 115 aa9.55□□□□□ -0.88
DDB1-215ENST00000539712 SMCPP49901 116 aaPredicted RBP9.54□□□□□ -0.88
DDB1-215ENST00000539712 S100A12P80511 92 aa9.54□□□□□ -0.88
DDB1-215ENST00000539712 GAGE2AQ6NT46 116 aa9.54□□□□□ -0.88
DDB1-215ENST00000539712 PET117Q6UWS5 81 aa9.53□□□□□ -0.88
DDB1-215ENST00000539712 COA6Q5JTJ3 125 aaKnown RBP9.52□□□□□ -0.89
DDB1-215ENST00000539712 S100A7L2Q5SY68 101 aa9.52□□□□□ -0.89
DDB1-215ENST00000539712 TRAV23DV6A0A075B6W5 121 aa9.51□□□□□ -0.89
DDB1-215ENST00000539712 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.51□□□□□ -0.89
DDB1-215ENST00000539712 C3orf79P0CE67 100 aa9.51□□□□□ -0.89
DDB1-215ENST00000539712 LINC00308Q8TCZ7 52 aa9.51□□□□□ -0.89
DDB1-215ENST00000539712 ZNF73O43830 326 aaPredicted RBP9.5□□□□□ -0.89
DDB1-215ENST00000539712 TIMM17BO60830 172 aa9.5□□□□□ -0.89
DDB1-215ENST00000539712 TTTY13Q9BZ97 58 aa9.5□□□□□ -0.89
DDB1-215ENST00000539712 C4orf48Q5BLP8 95 aa9.49□□□□□ -0.89
DDB1-215ENST00000539712 CDIP1Q9H305 208 aa9.49□□□□□ -0.89
DDB1-215ENST00000539712 SPINK1P00995 79 aa9.48□□□□□ -0.89
DDB1-215ENST00000539712 MOBPQ13875 183 aa9.48□□□□□ -0.89
DDB1-215ENST00000539712 IGLV9-49A0A0B4J1Y8 123 aa9.47□□□□□ -0.89
DDB1-215ENST00000539712 FP248Q71RG6 208 aaPredicted RBP9.47□□□□□ -0.89
DDB1-215ENST00000539712 ST20-AS1Q8NBB2 130 aa9.47□□□□□ -0.89
DDB1-215ENST00000539712 KRTAP9-2Q9BYQ4 174 aa9.47□□□□□ -0.89
DDB1-215ENST00000539712 SPANXCQ9NY87 97 aa9.47□□□□□ -0.89
DDB1-215ENST00000539712 ZNF815PA8K554 130 aa9.46□□□□□ -0.9
DDB1-215ENST00000539712 SSBP3-AS1Q7Z2R9 100 aa9.46□□□□□ -0.9
DDB1-215ENST00000539712 JOSD1Q15040 202 aaPredicted RBP9.45□□□□□ -0.9
DDB1-215ENST00000539712 TMA7Q9Y2S6 64 aaKnown RBP9.45□□□□□ -0.9
DDB1-215ENST00000539712 KRTAP13-3Q3SY46 172 aa9.44□□□□□ -0.9
DDB1-215ENST00000539712 KRTAP9-6A0A140TA67 174 aa9.43□□□□□ -0.9
DDB1-215ENST00000539712 KRTDAPP60985 99 aa9.43□□□□□ -0.9
DDB1-215ENST00000539712 Q8N377 158 aa9.43□□□□□ -0.9
DDB1-215ENST00000539712 RPS29P62273 56 aaKnown RBP9.42□□□□□ -0.9
DDB1-215ENST00000539712 ANKRD39Q53RE8 183 aa9.42□□□□□ -0.9
DDB1-215ENST00000539712 C5orf52A6NGY3 159 aa9.41□□□□□ -0.9
DDB1-215ENST00000539712 OR13C6PQ8NH95 151 aa9.41□□□□□ -0.9
DDB1-215ENST00000539712 SPANXDQ9BXN6 97 aa9.41□□□□□ -0.9
DDB1-215ENST00000539712 SPRR1BP22528 89 aa9.39□□□□□ -0.91
DDB1-215ENST00000539712 CBY1Q9Y3M2 126 aa9.39□□□□□ -0.91
DDB1-215ENST00000539712 A0A0U1RQV1 116 aa9.38□□□□□ -0.91
DDB1-215ENST00000539712 HINT1P49773 126 aaPredicted RBP9.37□□□□□ -0.91
DDB1-215ENST00000539712 LINC00518Q8N0U6 118 aa9.37□□□□□ -0.91
DDB1-215ENST00000539712 ATOH7Q8N100 152 aa9.37□□□□□ -0.91
DDB1-215ENST00000539712 ELOF1P60002 83 aaKnown RBP9.36□□□□□ -0.91
DDB1-215ENST00000539712 C6orf99Q4VX62 202 aa9.36□□□□□ -0.91
DDB1-215ENST00000539712 PCP2Q8IVA1 136 aa9.36□□□□□ -0.91
DDB1-215ENST00000539712 DHRS4-AS1Q9P1J3 65 aa9.36□□□□□ -0.91
DDB1-215ENST00000539712 SLC25A20O43772 301 aa9.35□□□□□ -0.91
DDB1-215ENST00000539712 C9orf153Q5TBE3 101 aa9.35□□□□□ -0.91
DDB1-215ENST00000539712 SCGB1D4Q6XE38 83 aa9.34□□□□□ -0.91
DDB1-215ENST00000539712 LOC105371267A0A1B0GV96 52 aa9.33□□□□□ -0.92
DDB1-215ENST00000539712 C20orf202A1L168 122 aa9.33□□□□□ -0.92
DDB1-215ENST00000539712 COX7BP24311 80 aa9.33□□□□□ -0.92
DDB1-215ENST00000539712 ASB16-AS1Q495Z4 193 aa9.32□□□□□ -0.92
DDB1-215ENST00000539712 IFITM1P13164 125 aa9.31□□□□□ -0.92
DDB1-215ENST00000539712 MUSTN1Q8IVN3 82 aa9.31□□□□□ -0.92
DDB1-215ENST00000539712 KRTAP4-1Q9BYQ7 146 aa9.31□□□□□ -0.92
DDB1-215ENST00000539712 TRBV7-6A0A0J9YX20 115 aa9.3□□□□□ -0.92
DDB1-215ENST00000539712 Q6ZVH6 145 aa9.3□□□□□ -0.92
DDB1-215ENST00000539712 LINC01547P58512 204 aaPredicted RBP9.28□□□□□ -0.92
DDB1-215ENST00000539712 HIST3H2BBQ8N257 126 aa9.28□□□□□ -0.92
DDB1-215ENST00000539712 SLC25A34Q6PIV7 304 aa9.27□□□□□ -0.93
DDB1-215ENST00000539712 SMIM29Q86T20 159 aa9.27□□□□□ -0.93
DDB1-215ENST00000539712 HIST1H2BLQ99880 126 aa9.27□□□□□ -0.93
DDB1-215ENST00000539712 A6NDN8 102 aa9.26□□□□□ -0.93
DDB1-215ENST00000539712 DEFB105AQ8NG35 78 aa9.26□□□□□ -0.93
DDB1-215ENST00000539712 COPS9Q8WXC6 57 aa9.26□□□□□ -0.93
DDB1-215ENST00000539712 LAMTOR3Q9UHA4 124 aa9.26□□□□□ -0.93
DDB1-215ENST00000539712 AKR1D1P51857 326 aa9.25□□□□□ -0.93
DDB1-215ENST00000539712 SNRPEP62304 92 aaKnown RBP9.25□□□□□ -0.93
DDB1-215ENST00000539712 TAL2Q16559 108 aa9.25□□□□□ -0.93
DDB1-215ENST00000539712 Q1RN00 199 aa9.25□□□□□ -0.93
DDB1-215ENST00000539712 HRCT1Q6UXD1 115 aa9.25□□□□□ -0.93
DDB1-215ENST00000539712 IGLV5-48A0A075B6I7 105 aa9.24□□□□□ -0.93
DDB1-215ENST00000539712 TEX49A0A1B0GTD5 131 aa9.24□□□□□ -0.93
DDB1-215ENST00000539712 A0A1B0GWB2 263 aa9.24□□□□□ -0.93
DDB1-215ENST00000539712 SMIM11BQ8TCY0 68 aa9.23□□□□□ -0.93
DDB1-215ENST00000539712 SEC61BP60468 96 aaKnown RBP9.22□□□□□ -0.93
DDB1-215ENST00000539712 CD164Q04900 197 aa9.21□□□□□ -0.94
DDB1-215ENST00000539712 TRAV13-2A0A0B4J235 113 aa9.2□□□□□ -0.94
DDB1-215ENST00000539712 LIMD2Q9BT23 127 aa9.2□□□□□ -0.94
DDB1-215ENST00000539712 PRO1933Q9H354 126 aa9.2□□□□□ -0.94
DDB1-215ENST00000539712 A0A0G2JQZ4 141 aa9.19□□□□□ -0.94
DDB1-215ENST00000539712 A4D1N5 150 aa9.18□□□□□ -0.94
DDB1-215ENST00000539712 S100A2P29034 98 aa9.18□□□□□ -0.94
DDB1-215ENST00000539712 Q5XG85 94 aa9.16□□□□□ -0.94
DDB1-215ENST00000539712 H7C2G1 150 aa9.15□□□□□ -0.94
DDB1-215ENST00000539712 HSBP1L1C9JCN9 74 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms