RNA–Protein interactions for RNA: ENST00000538725.1

MSRB3-208, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-208ENST00000538725 IGLV6-57P01721 117 aa11.5□□□□□ -0.57
MSRB3-208ENST00000538725 Q6ZRX8 168 aa11.5□□□□□ -0.57
MSRB3-208ENST00000538725 Q9BRP9 147 aa11.5□□□□□ -0.57
MSRB3-208ENST00000538725 MUC17Q685J3 4493 aa11.5□□□□□ -0.57
MSRB3-208ENST00000538725 SSBP3-AS1Q7Z2R9 100 aa11.48□□□□□ -0.57
MSRB3-208ENST00000538725 IGLV9-49A0A0B4J1Y8 123 aa11.47□□□□□ -0.57
MSRB3-208ENST00000538725 A0A0J9YXY3 114 aa11.47□□□□□ -0.57
MSRB3-208ENST00000538725 E9PLD3 99 aa11.47□□□□□ -0.57
MSRB3-208ENST00000538725 ADAMTSL4-AS1Q5T5F5 129 aa11.47□□□□□ -0.57
MSRB3-208ENST00000538725 MOBPQ13875 183 aa11.46□□□□□ -0.57
MSRB3-208ENST00000538725 SOSTDC1Q6X4U4 206 aa11.46□□□□□ -0.57
MSRB3-208ENST00000538725 TRAV23DV6A0A075B6W5 121 aa11.45□□□□□ -0.58
MSRB3-208ENST00000538725 NPC2P61916 151 aa11.45□□□□□ -0.58
MSRB3-208ENST00000538725 JOSD1Q15040 202 aaPredicted RBP11.45□□□□□ -0.58
MSRB3-208ENST00000538725 KRTAP13-3Q3SY46 172 aa11.43□□□□□ -0.58
MSRB3-208ENST00000538725 SYS1-DBNDD2H3BUS1 97 aa11.42□□□□□ -0.58
MSRB3-208ENST00000538725 ZNF73O43830 326 aaPredicted RBP11.42□□□□□ -0.58
MSRB3-208ENST00000538725 RPS29P62273 56 aaKnown RBP11.42□□□□□ -0.58
MSRB3-208ENST00000538725 FAT4Q6V0I7 4981 aa11.41□□□□□ -0.58
MSRB3-208ENST00000538725 CBY1Q9Y3M2 126 aa11.41□□□□□ -0.58
MSRB3-208ENST00000538725 HINT1P49773 126 aaPredicted RBP11.39□□□□□ -0.59
MSRB3-208ENST00000538725 Q8N377 158 aa11.39□□□□□ -0.59
MSRB3-208ENST00000538725 C5orf52A6NGY3 159 aa11.38□□□□□ -0.59
MSRB3-208ENST00000538725 HIST1H2BKO60814 126 aa11.38□□□□□ -0.59
MSRB3-208ENST00000538725 HIST1H2BJP06899 126 aa11.38□□□□□ -0.59
MSRB3-208ENST00000538725 HIST1H2BOP23527 126 aa11.38□□□□□ -0.59
MSRB3-208ENST00000538725 HIST1H2BBP33778 126 aa11.38□□□□□ -0.59
MSRB3-208ENST00000538725 HIST1H2BDP58876 126 aa11.38□□□□□ -0.59
MSRB3-208ENST00000538725 HIST1H2BCP62807 126 aa11.38□□□□□ -0.59
MSRB3-208ENST00000538725 HIST2H2BEQ16778 126 aa11.38□□□□□ -0.59
MSRB3-208ENST00000538725 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.38□□□□□ -0.59
MSRB3-208ENST00000538725 HIST1H2BHQ93079 126 aa11.38□□□□□ -0.59
MSRB3-208ENST00000538725 HIST1H2BNQ99877 126 aa11.38□□□□□ -0.59
MSRB3-208ENST00000538725 HIST1H2BMQ99879 126 aa11.38□□□□□ -0.59
MSRB3-208ENST00000538725 LINC00308Q8TCZ7 52 aa11.37□□□□□ -0.59
MSRB3-208ENST00000538725 LITAFQ99732 161 aa11.37□□□□□ -0.59
MSRB3-208ENST00000538725 SLC25A20O43772 301 aa11.36□□□□□ -0.59
MSRB3-208ENST00000538725 TIMM17BO60830 172 aa11.36□□□□□ -0.59
MSRB3-208ENST00000538725 LINC01545Q5VT33 79 aa11.36□□□□□ -0.59
MSRB3-208ENST00000538725 SPANXCQ9NY87 97 aa11.36□□□□□ -0.59
MSRB3-208ENST00000538725 C9orf153Q5TBE3 101 aa11.35□□□□□ -0.59
MSRB3-208ENST00000538725 PET117Q6UWS5 81 aa11.35□□□□□ -0.59
MSRB3-208ENST00000538725 ST20-AS1Q8NBB2 130 aa11.35□□□□□ -0.59
MSRB3-208ENST00000538725 OR13C6PQ8NH95 151 aa11.35□□□□□ -0.59
MSRB3-208ENST00000538725 KRTAP4-8Q9BYQ9 185 aa11.35□□□□□ -0.59
MSRB3-208ENST00000538725 ASB16-AS1Q495Z4 193 aa11.34□□□□□ -0.59
MSRB3-208ENST00000538725 ZNF815PA8K554 130 aa11.32□□□□□ -0.6
MSRB3-208ENST00000538725 DHRS4-AS1Q9P1J3 65 aa11.3□□□□□ -0.6
MSRB3-208ENST00000538725 LINC00518Q8N0U6 118 aa11.29□□□□□ -0.6
MSRB3-208ENST00000538725 SPANXDQ9BXN6 97 aa11.29□□□□□ -0.6
MSRB3-208ENST00000538725 C3orf79P0CE67 100 aa11.28□□□□□ -0.6
MSRB3-208ENST00000538725 SPRR1BP22528 89 aa11.28□□□□□ -0.6
MSRB3-208ENST00000538725 SEC61BP60468 96 aaKnown RBP11.28□□□□□ -0.6
MSRB3-208ENST00000538725 KRTAP9-2Q9BYQ4 174 aa11.28□□□□□ -0.6
MSRB3-208ENST00000538725 TTTY13Q9BZ97 58 aa11.28□□□□□ -0.6
MSRB3-208ENST00000538725 SLC25A34Q6PIV7 304 aa11.27□□□□□ -0.61
MSRB3-208ENST00000538725 ELOF1P60002 83 aaKnown RBP11.24□□□□□ -0.61
MSRB3-208ENST00000538725 COX7BP24311 80 aa11.23□□□□□ -0.61
MSRB3-208ENST00000538725 KRTDAPP60985 99 aa11.23□□□□□ -0.61
MSRB3-208ENST00000538725 C6orf99Q4VX62 202 aa11.23□□□□□ -0.61
MSRB3-208ENST00000538725 COA6Q5JTJ3 125 aaKnown RBP11.23□□□□□ -0.61
MSRB3-208ENST00000538725 LAMTOR3Q9UHA4 124 aa11.23□□□□□ -0.61
MSRB3-208ENST00000538725 SCGB1D4Q6XE38 83 aa11.21□□□□□ -0.61
MSRB3-208ENST00000538725 KRTAP4-1Q9BYQ7 146 aa11.21□□□□□ -0.61
MSRB3-208ENST00000538725 TAL2Q16559 108 aa11.19□□□□□ -0.62
MSRB3-208ENST00000538725 HRCT1Q6UXD1 115 aa11.19□□□□□ -0.62
MSRB3-208ENST00000538725 COPS9Q8WXC6 57 aa11.19□□□□□ -0.62
MSRB3-208ENST00000538725 LIMD2Q9BT23 127 aa11.19□□□□□ -0.62
MSRB3-208ENST00000538725 TRBV7-6A0A0J9YX20 115 aa11.18□□□□□ -0.62
MSRB3-208ENST00000538725 C20orf202A1L168 122 aa11.17□□□□□ -0.62
MSRB3-208ENST00000538725 H3BS24 57 aa11.17□□□□□ -0.62
MSRB3-208ENST00000538725 IFITM1P13164 125 aa11.17□□□□□ -0.62
MSRB3-208ENST00000538725 DEFB105AQ8NG35 78 aa11.17□□□□□ -0.62
MSRB3-208ENST00000538725 TEX49A0A1B0GTD5 131 aa11.16□□□□□ -0.62
MSRB3-208ENST00000538725 ANKRD39Q53RE8 183 aa11.16□□□□□ -0.62
MSRB3-208ENST00000538725 LINC01547P58512 204 aaPredicted RBP11.15□□□□□ -0.62
MSRB3-208ENST00000538725 Q6ZVH6 145 aa11.15□□□□□ -0.62
MSRB3-208ENST00000538725 Q1RN00 199 aa11.14□□□□□ -0.63
MSRB3-208ENST00000538725 A0A1B0GWB2 263 aa11.13□□□□□ -0.63
MSRB3-208ENST00000538725 A6NDN8 102 aa11.13□□□□□ -0.63
MSRB3-208ENST00000538725 CD164Q04900 197 aa11.13□□□□□ -0.63
MSRB3-208ENST00000538725 PRO1933Q9H354 126 aa11.13□□□□□ -0.63
MSRB3-208ENST00000538725 MUSTN1Q8IVN3 82 aa11.12□□□□□ -0.63
MSRB3-208ENST00000538725 ATOH7Q8N100 152 aa11.12□□□□□ -0.63
MSRB3-208ENST00000538725 AKR1D1P51857 326 aa11.11□□□□□ -0.63
MSRB3-208ENST00000538725 PCP2Q8IVA1 136 aa11.1□□□□□ -0.63
MSRB3-208ENST00000538725 SMIM29Q86T20 159 aa11.09□□□□□ -0.63
MSRB3-208ENST00000538725 IGLV5-48A0A075B6I7 105 aa11.07□□□□□ -0.64
MSRB3-208ENST00000538725 A4D1N5 150 aa11.07□□□□□ -0.64
MSRB3-208ENST00000538725 H7C2G1 150 aa11.07□□□□□ -0.64
MSRB3-208ENST00000538725 TRAV13-2A0A0B4J235 113 aa11.06□□□□□ -0.64
MSRB3-208ENST00000538725 C9orf92A6NGG3 77 aa11.05□□□□□ -0.64
MSRB3-208ENST00000538725 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.05□□□□□ -0.64
MSRB3-208ENST00000538725 SNRPEP62304 92 aaKnown RBP11.05□□□□□ -0.64
MSRB3-208ENST00000538725 Q5XG85 94 aa11.05□□□□□ -0.64
MSRB3-208ENST00000538725 SMIM11BQ8TCY0 68 aa11.04□□□□□ -0.64
MSRB3-208ENST00000538725 KRTAP9-6A0A140TA67 174 aa11.03□□□□□ -0.64
MSRB3-208ENST00000538725 NHP2Q9NX24 153 aaKnown RBP11.03□□□□□ -0.64
MSRB3-208ENST00000538725 PCOTHQ58A44 107 aa11.01□□□□□ -0.65
MSRB3-208ENST00000538725 KRTAP4-12Q9BQ66 201 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms