RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 LINC00337Q8N6G1 96 aa4.98□□□□□ -1.61
DDB1-212ENST00000538470 TTTY13Q9BZ97 58 aa4.98□□□□□ -1.61
DDB1-212ENST00000538470 TMA7Q9Y2S6 64 aaKnown RBP4.98□□□□□ -1.61
DDB1-212ENST00000538470 A0A0J9YXY3 114 aa4.97□□□□□ -1.61
DDB1-212ENST00000538470 NCR3O14931 201 aa4.97□□□□□ -1.61
DDB1-212ENST00000538470 SPRR1AP35321 89 aa4.97□□□□□ -1.61
DDB1-212ENST00000538470 ANKRD39Q53RE8 183 aa4.97□□□□□ -1.61
DDB1-212ENST00000538470 FP248Q71RG6 208 aaPredicted RBP4.97□□□□□ -1.61
DDB1-212ENST00000538470 MIEN1Q9BRT3 115 aa4.97□□□□□ -1.61
DDB1-212ENST00000538470 C5orf52A6NGY3 159 aa4.96□□□□□ -1.62
DDB1-212ENST00000538470 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
DDB1-212ENST00000538470 S100A12P80511 92 aa4.96□□□□□ -1.62
DDB1-212ENST00000538470 KCNQ1DNQ9H478 68 aa4.96□□□□□ -1.62
DDB1-212ENST00000538470 ETDCA0A1B0GVM5 59 aa4.95□□□□□ -1.62
DDB1-212ENST00000538470 SCGB1D1O95968 90 aa4.95□□□□□ -1.62
DDB1-212ENST00000538470 AKR1D1P51857 326 aa4.95□□□□□ -1.62
DDB1-212ENST00000538470 ADAMTSL4-AS1Q5T5F5 129 aa4.95□□□□□ -1.62
DDB1-212ENST00000538470 PPDPFQ9H3Y8 114 aa4.95□□□□□ -1.62
DDB1-212ENST00000538470 HSBP1L1C9JCN9 74 aa4.94□□□□□ -1.62
DDB1-212ENST00000538470 KRTAP4-16G5E9R7 235 aaPredicted RBP4.94□□□□□ -1.62
DDB1-212ENST00000538470 LINC00483Q53H64 154 aa4.94□□□□□ -1.62
DDB1-212ENST00000538470 SCGB1D4Q6XE38 83 aa4.94□□□□□ -1.62
DDB1-212ENST00000538470 PCP2Q8IVA1 136 aa4.94□□□□□ -1.62
DDB1-212ENST00000538470 LOC107984156A0A0G2JMH3 177 aa4.93□□□□□ -1.62
DDB1-212ENST00000538470 TRBV10-3A0A0K0K1G6 114 aa4.93□□□□□ -1.62
DDB1-212ENST00000538470 EIF4EBP3O60516 100 aaPredicted RBP4.93□□□□□ -1.62
DDB1-212ENST00000538470 SPINK1P00995 79 aa4.93□□□□□ -1.62
DDB1-212ENST00000538470 SOSTDC1Q6X4U4 206 aa4.93□□□□□ -1.62
DDB1-212ENST00000538470 ARL17AQ8IVW1 177 aa4.93□□□□□ -1.62
DDB1-212ENST00000538470 Q8NBF4 154 aa4.93□□□□□ -1.62
DDB1-212ENST00000538470 LITAFQ99732 161 aa4.93□□□□□ -1.62
DDB1-212ENST00000538470 TRBV10-2A0A0K0K1G8 114 aa4.92□□□□□ -1.62
DDB1-212ENST00000538470 TIMM17BO60830 172 aa4.92□□□□□ -1.62
DDB1-212ENST00000538470 RPS29P62273 56 aaKnown RBP4.92□□□□□ -1.62
DDB1-212ENST00000538470 LINC00308Q8TCZ7 52 aa4.92□□□□□ -1.62
DDB1-212ENST00000538470 SMCR5Q8TEV8 140 aa4.92□□□□□ -1.62
DDB1-212ENST00000538470 SPANXB1Q9NS25 103 aaPredicted RBP4.92□□□□□ -1.62
DDB1-212ENST00000538470 DDTP30046 118 aa4.91□□□□□ -1.62
DDB1-212ENST00000538470 KRTAP13-3Q3SY46 172 aa4.91□□□□□ -1.62
DDB1-212ENST00000538470 B5MCH6 92 aa4.9□□□□□ -1.63
DDB1-212ENST00000538470 S100A7L2Q5SY68 101 aa4.9□□□□□ -1.63
DDB1-212ENST00000538470 Q6ZRX8 168 aa4.9□□□□□ -1.63
DDB1-212ENST00000538470 KRTAP9-2Q9BYQ4 174 aa4.9□□□□□ -1.63
DDB1-212ENST00000538470 NDUFC2O95298 119 aa4.89□□□□□ -1.63
DDB1-212ENST00000538470 MOBPQ13875 183 aa4.89□□□□□ -1.63
DDB1-212ENST00000538470 GAGE2AQ6NT46 116 aa4.89□□□□□ -1.63
DDB1-212ENST00000538470 SSBP3-AS1Q7Z2R9 100 aa4.89□□□□□ -1.63
DDB1-212ENST00000538470 SPANXCQ9NY87 97 aa4.89□□□□□ -1.63
DDB1-212ENST00000538470 JOSD1Q15040 202 aaPredicted RBP4.88□□□□□ -1.63
DDB1-212ENST00000538470 ASB16-AS1Q495Z4 193 aa4.88□□□□□ -1.63
DDB1-212ENST00000538470 OR13C6PQ8NH95 151 aa4.88□□□□□ -1.63
DDB1-212ENST00000538470 Q9BRP9 147 aa4.88□□□□□ -1.63
DDB1-212ENST00000538470 SPANXDQ9BXN6 97 aa4.88□□□□□ -1.63
DDB1-212ENST00000538470 PAM16Q9Y3D7 125 aa4.88□□□□□ -1.63
DDB1-212ENST00000538470 CBY1Q9Y3M2 126 aa4.88□□□□□ -1.63
DDB1-212ENST00000538470 TRAV23DV6A0A075B6W5 121 aa4.87□□□□□ -1.63
DDB1-212ENST00000538470 IGLV9-49A0A0B4J1Y8 123 aa4.87□□□□□ -1.63
DDB1-212ENST00000538470 IGLV6-57P01721 117 aa4.87□□□□□ -1.63
DDB1-212ENST00000538470 Q8N377 158 aa4.87□□□□□ -1.63
DDB1-212ENST00000538470 VAMP8Q9BV40 100 aa4.87□□□□□ -1.63
DDB1-212ENST00000538470 SLC25A20O43772 301 aa4.86□□□□□ -1.63
DDB1-212ENST00000538470 ERC2-IT1O76042 136 aa4.86□□□□□ -1.63
DDB1-212ENST00000538470 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
DDB1-212ENST00000538470 C21orf62-AS1Q17RA5 79 aa4.86□□□□□ -1.63
DDB1-212ENST00000538470 SPATA45Q537H7 98 aa4.86□□□□□ -1.63
DDB1-212ENST00000538470 MUSTN1Q8IVN3 82 aa4.86□□□□□ -1.63
DDB1-212ENST00000538470 COPS9Q8WXC6 57 aa4.86□□□□□ -1.63
DDB1-212ENST00000538470 IFITM1P13164 125 aa4.85□□□□□ -1.63
DDB1-212ENST00000538470 Q6ZVH6 145 aa4.85□□□□□ -1.63
DDB1-212ENST00000538470 A6NDN8 102 aa4.84□□□□□ -1.63
DDB1-212ENST00000538470 ZNF73O43830 326 aaPredicted RBP4.84□□□□□ -1.63
DDB1-212ENST00000538470 COX8AP10176 69 aa4.84□□□□□ -1.63
DDB1-212ENST00000538470 C9orf153Q5TBE3 101 aa4.84□□□□□ -1.63
DDB1-212ENST00000538470 C14orf144Q96I85 54 aa4.84□□□□□ -1.63
DDB1-212ENST00000538470 HINT1P49773 126 aaPredicted RBP4.83□□□□□ -1.64
DDB1-212ENST00000538470 PYY3Q5JQD4 70 aa4.83□□□□□ -1.64
DDB1-212ENST00000538470 LINC00518Q8N0U6 118 aa4.83□□□□□ -1.64
DDB1-212ENST00000538470 XP32Q5T750 250 aa4.82□□□□□ -1.64
DDB1-212ENST00000538470 SLC25A34Q6PIV7 304 aa4.82□□□□□ -1.64
DDB1-212ENST00000538470 HIST1H4GQ99525 98 aa4.82□□□□□ -1.64
DDB1-212ENST00000538470 C12orf57Q99622 126 aa4.82□□□□□ -1.64
DDB1-212ENST00000538470 SPRR1BP22528 89 aa4.81□□□□□ -1.64
DDB1-212ENST00000538470 LINC01547P58512 204 aaPredicted RBP4.81□□□□□ -1.64
DDB1-212ENST00000538470 C6orf99Q4VX62 202 aa4.81□□□□□ -1.64
DDB1-212ENST00000538470 LIMD2Q9BT23 127 aa4.81□□□□□ -1.64
DDB1-212ENST00000538470 A4D1N5 150 aa4.8□□□□□ -1.64
DDB1-212ENST00000538470 DLEU1O43261 78 aa4.8□□□□□ -1.64
DDB1-212ENST00000538470 DHRS4-AS1Q9P1J3 65 aa4.8□□□□□ -1.64
DDB1-212ENST00000538470 TRAV13-2A0A0B4J235 113 aa4.79□□□□□ -1.64
DDB1-212ENST00000538470 COX7BP24311 80 aa4.79□□□□□ -1.64
DDB1-212ENST00000538470 C2orf91Q6ZV80 131 aa4.79□□□□□ -1.64
DDB1-212ENST00000538470 ST20-AS1Q8NBB2 130 aa4.79□□□□□ -1.64
DDB1-212ENST00000538470 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
DDB1-212ENST00000538470 ELOF1P60002 83 aaKnown RBP4.78□□□□□ -1.64
DDB1-212ENST00000538470 KRTAP4-1Q9BYQ7 146 aa4.78□□□□□ -1.64
DDB1-212ENST00000538470 SMIM11BQ8TCY0 68 aa4.77□□□□□ -1.65
DDB1-212ENST00000538470 HIGD1BQ9P298 99 aa4.77□□□□□ -1.65
DDB1-212ENST00000538470 LAMTOR3Q9UHA4 124 aa4.77□□□□□ -1.65
DDB1-212ENST00000538470 H7C2G1 150 aa4.76□□□□□ -1.65
DDB1-212ENST00000538470 A0A1B0GWB2 263 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms