RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 SOSTDC1Q6X4U4 206 aa12.4□□□□□ -0.42
CCDC78-215ENST00000538176 SPANXCQ9NY87 97 aa12.4□□□□□ -0.42
CCDC78-215ENST00000538176 C20orf202A1L168 122 aa12.38□□□□□ -0.43
CCDC78-215ENST00000538176 ZNF815PA8K554 130 aa12.38□□□□□ -0.43
CCDC78-215ENST00000538176 NPC2P61916 151 aa12.38□□□□□ -0.43
CCDC78-215ENST00000538176 LINC00308Q8TCZ7 52 aa12.38□□□□□ -0.43
CCDC78-215ENST00000538176 C5orf52A6NGY3 159 aa12.37□□□□□ -0.43
CCDC78-215ENST00000538176 ZNF73O43830 326 aaPredicted RBP12.37□□□□□ -0.43
CCDC78-215ENST00000538176 GAGE2AQ6NT46 116 aa12.37□□□□□ -0.43
CCDC78-215ENST00000538176 KRTDAPP60985 99 aa12.36□□□□□ -0.43
CCDC78-215ENST00000538176 LINC00518Q8N0U6 118 aa12.36□□□□□ -0.43
CCDC78-215ENST00000538176 LITAFQ99732 161 aa12.36□□□□□ -0.43
CCDC78-215ENST00000538176 PPDPFQ9H3Y8 114 aa12.36□□□□□ -0.43
CCDC78-215ENST00000538176 SPINK1P00995 79 aa12.35□□□□□ -0.43
CCDC78-215ENST00000538176 SSBP3-AS1Q7Z2R9 100 aa12.35□□□□□ -0.43
CCDC78-215ENST00000538176 Q9BRP9 147 aa12.35□□□□□ -0.43
CCDC78-215ENST00000538176 EIF4EBP3O60516 100 aaPredicted RBP12.34□□□□□ -0.43
CCDC78-215ENST00000538176 COPS9Q8WXC6 57 aa12.34□□□□□ -0.43
CCDC78-215ENST00000538176 RETNLBQ9BQ08 111 aa12.34□□□□□ -0.43
CCDC78-215ENST00000538176 IGLV7-46A0A075B6I9 117 aa12.33□□□□□ -0.44
CCDC78-215ENST00000538176 TPRXLQ17RH7 258 aa12.33□□□□□ -0.44
CCDC78-215ENST00000538176 Q8NBF4 154 aa12.33□□□□□ -0.44
CCDC78-215ENST00000538176 ERC2-IT1O76042 136 aa12.32□□□□□ -0.44
CCDC78-215ENST00000538176 OR13C6PQ8NH95 151 aa12.32□□□□□ -0.44
CCDC78-215ENST00000538176 SPANXDQ9BXN6 97 aa12.32□□□□□ -0.44
CCDC78-215ENST00000538176 SCGB1D4Q6XE38 83 aa12.3□□□□□ -0.44
CCDC78-215ENST00000538176 FP248Q71RG6 208 aaPredicted RBP12.3□□□□□ -0.44
CCDC78-215ENST00000538176 RPS29P62273 56 aaKnown RBP12.28□□□□□ -0.44
CCDC78-215ENST00000538176 SNRPEP62304 92 aaKnown RBP12.28□□□□□ -0.44
CCDC78-215ENST00000538176 Q6ZVH6 145 aa12.28□□□□□ -0.44
CCDC78-215ENST00000538176 CDIP1Q9H305 208 aa12.28□□□□□ -0.44
CCDC78-215ENST00000538176 DHRS4-AS1Q9P1J3 65 aa12.27□□□□□ -0.45
CCDC78-215ENST00000538176 IGLV9-49A0A0B4J1Y8 123 aa12.26□□□□□ -0.45
CCDC78-215ENST00000538176 IFITM1P13164 125 aa12.26□□□□□ -0.45
CCDC78-215ENST00000538176 TTTY13Q9BZ97 58 aa12.26□□□□□ -0.45
CCDC78-215ENST00000538176 MOBPQ13875 183 aa12.25□□□□□ -0.45
CCDC78-215ENST00000538176 SLC25A34Q6PIV7 304 aa12.24□□□□□ -0.45
CCDC78-215ENST00000538176 A0A0U1RQV1 116 aa12.23□□□□□ -0.45
CCDC78-215ENST00000538176 S100A1P23297 94 aa12.23□□□□□ -0.45
CCDC78-215ENST00000538176 ANKRD39Q53RE8 183 aa12.21□□□□□ -0.45
CCDC78-215ENST00000538176 TRBV7-6A0A0J9YX20 115 aa12.19□□□□□ -0.46
CCDC78-215ENST00000538176 S100A2P29034 98 aa12.19□□□□□ -0.46
CCDC78-215ENST00000538176 SPRR1BP22528 89 aa12.18□□□□□ -0.46
CCDC78-215ENST00000538176 COX7BP24311 80 aa12.18□□□□□ -0.46
CCDC78-215ENST00000538176 ELOF1P60002 83 aaKnown RBP12.18□□□□□ -0.46
CCDC78-215ENST00000538176 C9orf153Q5TBE3 101 aa12.18□□□□□ -0.46
CCDC78-215ENST00000538176 ATOH7Q8N100 152 aa12.18□□□□□ -0.46
CCDC78-215ENST00000538176 SLC25A20O43772 301 aa12.17□□□□□ -0.46
CCDC78-215ENST00000538176 C6orf99Q4VX62 202 aa12.17□□□□□ -0.46
CCDC78-215ENST00000538176 ST20-AS1Q8NBB2 130 aa12.17□□□□□ -0.46
CCDC78-215ENST00000538176 PCP2Q8IVA1 136 aa12.15□□□□□ -0.46
CCDC78-215ENST00000538176 LAMTOR3Q9UHA4 124 aa12.15□□□□□ -0.46
CCDC78-215ENST00000538176 HSBP1L1C9JCN9 74 aa12.14□□□□□ -0.47
CCDC78-215ENST00000538176 MUSTN1Q8IVN3 82 aa12.14□□□□□ -0.47
CCDC78-215ENST00000538176 HIST3H2BBQ8N257 126 aa12.14□□□□□ -0.47
CCDC78-215ENST00000538176 A0A1B0GWB2 263 aa12.13□□□□□ -0.47
CCDC78-215ENST00000538176 A6NDN8 102 aa12.13□□□□□ -0.47
CCDC78-215ENST00000538176 S100A6P06703 90 aa12.13□□□□□ -0.47
CCDC78-215ENST00000538176 Q8N377 158 aa12.13□□□□□ -0.47
CCDC78-215ENST00000538176 TRAV13-2A0A0B4J235 113 aa12.12□□□□□ -0.47
CCDC78-215ENST00000538176 A4D1N5 150 aa12.12□□□□□ -0.47
CCDC78-215ENST00000538176 HIST1H2BLQ99880 126 aa12.12□□□□□ -0.47
CCDC78-215ENST00000538176 TAL2Q16559 108 aa12.11□□□□□ -0.47
CCDC78-215ENST00000538176 MUC2Q02817 5179 aa12.11□□□□□ -0.47
CCDC78-215ENST00000538176 KRTAP13-3Q3SY46 172 aa12.09□□□□□ -0.47
CCDC78-215ENST00000538176 TEX49A0A1B0GTD5 131 aa12.08□□□□□ -0.48
CCDC78-215ENST00000538176 NHP2Q9NX24 153 aaKnown RBP12.07□□□□□ -0.48
CCDC78-215ENST00000538176 LIMD2Q9BT23 127 aa12.06□□□□□ -0.48
CCDC78-215ENST00000538176 DEFB105AQ8NG35 78 aa12.03□□□□□ -0.48
CCDC78-215ENST00000538176 CD164Q04900 197 aa12.02□□□□□ -0.49
CCDC78-215ENST00000538176 VAMP3Q15836 100 aa12.02□□□□□ -0.49
CCDC78-215ENST00000538176 PRO1933Q9H354 126 aa12.02□□□□□ -0.49
CCDC78-215ENST00000538176 IGLV5-48A0A075B6I7 105 aa12□□□□□ -0.49
CCDC78-215ENST00000538176 SMIM11BQ8TCY0 68 aa12□□□□□ -0.49
CCDC78-215ENST00000538176 Q1RN00 199 aa11.98□□□□□ -0.49
CCDC78-215ENST00000538176 SCGB1D1O95968 90 aa11.97□□□□□ -0.49
CCDC78-215ENST00000538176 SEC61BP60468 96 aaKnown RBP11.97□□□□□ -0.49
CCDC78-215ENST00000538176 ASB16-AS1Q495Z4 193 aa11.97□□□□□ -0.49
CCDC78-215ENST00000538176 H7C2G1 150 aa11.94□□□□□ -0.5
CCDC78-215ENST00000538176 LINC01547P58512 204 aaPredicted RBP11.94□□□□□ -0.5
CCDC78-215ENST00000538176 HRCT1Q6UXD1 115 aa11.94□□□□□ -0.5
CCDC78-215ENST00000538176 SMIM29Q86T20 159 aa11.94□□□□□ -0.5
CCDC78-215ENST00000538176 MUC17Q685J3 4493 aa11.93□□□□□ -0.5
CCDC78-215ENST00000538176 Q5XG85 94 aa11.92□□□□□ -0.5
CCDC78-215ENST00000538176 DLEU1O43261 78 aa11.9□□□□□ -0.5
CCDC78-215ENST00000538176 COX8AP10176 69 aa11.9□□□□□ -0.5
CCDC78-215ENST00000538176 HIST1H4GQ99525 98 aa11.9□□□□□ -0.5
CCDC78-215ENST00000538176 XP32Q5T750 250 aa11.89□□□□□ -0.51
CCDC78-215ENST00000538176 LINC00575Q6W349 94 aa11.89□□□□□ -0.51
CCDC78-215ENST00000538176 hADV29S1A0JD25 119 aa11.87□□□□□ -0.51
CCDC78-215ENST00000538176 F8WEM9 126 aa11.86□□□□□ -0.51
CCDC78-215ENST00000538176 BVES-AS1Q5T3Y7 98 aa11.86□□□□□ -0.51
CCDC78-215ENST00000538176 LCE2AQ5TA79 106 aaPredicted RBP11.82□□□□□ -0.52
CCDC78-215ENST00000538176 Q6ZQY7 126 aa11.81□□□□□ -0.52
CCDC78-215ENST00000538176 PPDPFLQ8WWR9 84 aa11.81□□□□□ -0.52
CCDC78-215ENST00000538176 TCL1BO95988 128 aa11.8□□□□□ -0.52
CCDC78-215ENST00000538176 Q6JHZ5 121 aa11.8□□□□□ -0.52
CCDC78-215ENST00000538176 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.8□□□□□ -0.52
CCDC78-215ENST00000538176 HIGD1BQ9P298 99 aa11.8□□□□□ -0.52
CCDC78-215ENST00000538176 SNCGO76070 127 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms