RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 LINC01547P58512 204 aaPredicted RBP3.64□□□□□ -1.83
DDB1-210ENST00000538129 C1orf137Q5JT78 98 aa3.64□□□□□ -1.83
DDB1-210ENST00000538129 SPINK6Q6UWN8 80 aa3.64□□□□□ -1.83
DDB1-210ENST00000538129 SMIM29Q86T20 159 aa3.64□□□□□ -1.83
DDB1-210ENST00000538129 KRTAP11-1Q8IUC1 163 aa3.64□□□□□ -1.83
DDB1-210ENST00000538129 LINC00167Q96N53 147 aa3.64□□□□□ -1.83
DDB1-210ENST00000538129 FAT3Q8TDW7 4589 aa3.64□□□□□ -1.83
DDB1-210ENST00000538129 DMBT1Q9UGM3 2413 aaPredicted RBP3.64□□□□□ -1.83
DDB1-210ENST00000538129 PKHD1L1Q86WI1 4243 aa3.63□□□□□ -1.83
DDB1-210ENST00000538129 TIMM17BO60830 172 aa3.63□□□□□ -1.83
DDB1-210ENST00000538129 IGLV7-43P04211 117 aa3.63□□□□□ -1.83
DDB1-210ENST00000538129 HNRNPA3P51991 378 aaKnown RBP3.63□□□□□ -1.83
DDB1-210ENST00000538129 BOD1L2Q8IYS8 172 aa3.63□□□□□ -1.83
DDB1-210ENST00000538129 ATOH7Q8N100 152 aa3.63□□□□□ -1.83
DDB1-210ENST00000538129 IGLV1-50A0A075B6I6 118 aa3.62□□□□□ -1.83
DDB1-210ENST00000538129 RPL37AP8A6NKH3 93 aa3.62□□□□□ -1.83
DDB1-210ENST00000538129 ZNF815PA8K554 130 aa3.62□□□□□ -1.83
DDB1-210ENST00000538129 HSBP1L1C9JCN9 74 aa3.62□□□□□ -1.83
DDB1-210ENST00000538129 M0R378 163 aa3.62□□□□□ -1.83
DDB1-210ENST00000538129 OXTP01178 125 aa3.62□□□□□ -1.83
DDB1-210ENST00000538129 ADAMTSL4-AS1Q5T5F5 129 aa3.62□□□□□ -1.83
DDB1-210ENST00000538129 HERC1Q15751 4861 aa3.62□□□□□ -1.83
DDB1-210ENST00000538129 BCE1O60756 84 aa3.61□□□□□ -1.83
DDB1-210ENST00000538129 NDUFC2O95298 119 aa3.61□□□□□ -1.83
DDB1-210ENST00000538129 Q6ZVH6 145 aa3.61□□□□□ -1.83
DDB1-210ENST00000538129 DAND5Q8N907 189 aa3.61□□□□□ -1.83
DDB1-210ENST00000538129 Q8NDZ9 215 aa3.61□□□□□ -1.83
DDB1-210ENST00000538129 DIRC1Q969H9 104 aa3.61□□□□□ -1.83
DDB1-210ENST00000538129 LITAFQ99732 161 aa3.61□□□□□ -1.83
DDB1-210ENST00000538129 MIEN1Q9BRT3 115 aa3.61□□□□□ -1.83
DDB1-210ENST00000538129 TTTY13Q9BZ97 58 aa3.61□□□□□ -1.83
DDB1-210ENST00000538129 IGKV2-28A0A075B6P5 120 aa3.6□□□□□ -1.83
DDB1-210ENST00000538129 TRBV10-2A0A0K0K1G8 114 aa3.6□□□□□ -1.83
DDB1-210ENST00000538129 ZNF861PO60384 105 aa3.6□□□□□ -1.83
DDB1-210ENST00000538129 IGKV2D-28P01615 120 aa3.6□□□□□ -1.83
DDB1-210ENST00000538129 RPL13AP40429 203 aaKnown RBP3.6□□□□□ -1.83
DDB1-210ENST00000538129 RPL28P46779 137 aaKnown RBP3.6□□□□□ -1.83
DDB1-210ENST00000538129 JOSD1Q15040 202 aaPredicted RBP3.6□□□□□ -1.83
DDB1-210ENST00000538129 REG3GQ6UW15 175 aa3.6□□□□□ -1.83
DDB1-210ENST00000538129 SCGB1D4Q6XE38 83 aa3.6□□□□□ -1.83
DDB1-210ENST00000538129 PCP2Q8IVA1 136 aa3.6□□□□□ -1.83
DDB1-210ENST00000538129 LINC00308Q8TCZ7 52 aa3.6□□□□□ -1.83
DDB1-210ENST00000538129 COPS9Q8WXC6 57 aa3.6□□□□□ -1.83
DDB1-210ENST00000538129 PPDPFQ9H3Y8 114 aa3.6□□□□□ -1.83
DDB1-210ENST00000538129 TMEM238C9JI98 176 aa3.59□□□□□ -1.83
DDB1-210ENST00000538129 H0Y9J4 135 aa3.59□□□□□ -1.83
DDB1-210ENST00000538129 IFITM1P13164 125 aa3.59□□□□□ -1.83
DDB1-210ENST00000538129 S100A12P80511 92 aa3.59□□□□□ -1.83
DDB1-210ENST00000538129 SOSTDC1Q6X4U4 206 aa3.59□□□□□ -1.83
DDB1-210ENST00000538129 LINC01600Q96MT4 127 aa3.59□□□□□ -1.83
DDB1-210ENST00000538129 SPANXDQ9BXN6 97 aa3.59□□□□□ -1.83
DDB1-210ENST00000538129 KCNQ1DNQ9H478 68 aa3.59□□□□□ -1.83
DDB1-210ENST00000538129 SPANXB1Q9NS25 103 aaPredicted RBP3.59□□□□□ -1.83
DDB1-210ENST00000538129 SPANXCQ9NY87 97 aa3.59□□□□□ -1.83
DDB1-210ENST00000538129 TRBV10-3A0A0K0K1G6 114 aa3.58□□□□□ -1.84
DDB1-210ENST00000538129 NCR3O14931 201 aa3.58□□□□□ -1.84
DDB1-210ENST00000538129 DLEU1O43261 78 aa3.58□□□□□ -1.84
DDB1-210ENST00000538129 IGLV6-57P01721 117 aa3.58□□□□□ -1.84
DDB1-210ENST00000538129 KRTAP13-1Q8IUC0 172 aa3.58□□□□□ -1.84
DDB1-210ENST00000538129 TMEM126AQ9H061 195 aa3.58□□□□□ -1.84
DDB1-210ENST00000538129 CBY1Q9Y3M2 126 aa3.58□□□□□ -1.84
DDB1-210ENST00000538129 COX8AP10176 69 aa3.57□□□□□ -1.84
DDB1-210ENST00000538129 DDTP30046 118 aa3.57□□□□□ -1.84
DDB1-210ENST00000538129 SPRR1AP35321 89 aa3.57□□□□□ -1.84
DDB1-210ENST00000538129 UBE2AP49459 152 aa3.57□□□□□ -1.84
DDB1-210ENST00000538129 NPC2P61916 151 aa3.57□□□□□ -1.84
DDB1-210ENST00000538129 S100A7L2Q5SY68 101 aa3.57□□□□□ -1.84
DDB1-210ENST00000538129 LINC00337Q8N6G1 96 aa3.57□□□□□ -1.84
DDB1-210ENST00000538129 KRTAP4-16G5E9R7 235 aaPredicted RBP3.56□□□□□ -1.84
DDB1-210ENST00000538129 KRTAP10-8P60410 259 aa3.56□□□□□ -1.84
DDB1-210ENST00000538129 FAM19A1Q7Z5A9 133 aa3.56□□□□□ -1.84
DDB1-210ENST00000538129 MUSTN1Q8IVN3 82 aa3.56□□□□□ -1.84
DDB1-210ENST00000538129 VAMP8Q9BV40 100 aa3.56□□□□□ -1.84
DDB1-210ENST00000538129 TNXBP22105 4242 aa3.55□□□□□ -1.84
DDB1-210ENST00000538129 A0A087X002 238 aa3.55□□□□□ -1.84
DDB1-210ENST00000538129 ETDCA0A1B0GVM5 59 aa3.55□□□□□ -1.84
DDB1-210ENST00000538129 MT1HL1P0DM35 61 aa3.55□□□□□ -1.84
DDB1-210ENST00000538129 PRLHP81277 87 aa3.55□□□□□ -1.84
DDB1-210ENST00000538129 SPATA45Q537H7 98 aa3.55□□□□□ -1.84
DDB1-210ENST00000538129 PYY3Q5JQD4 70 aa3.55□□□□□ -1.84
DDB1-210ENST00000538129 OR13C6PQ8NH95 151 aa3.55□□□□□ -1.84
DDB1-210ENST00000538129 TRAV23DV6A0A075B6W5 121 aa3.54□□□□□ -1.84
DDB1-210ENST00000538129 ZNF73O43830 326 aaPredicted RBP3.54□□□□□ -1.84
DDB1-210ENST00000538129 KRTAP1-4P0C5Y4 121 aa3.54□□□□□ -1.84
DDB1-210ENST00000538129 HINT1P49773 126 aaPredicted RBP3.54□□□□□ -1.84
DDB1-210ENST00000538129 NDUFV3P56181 108 aaKnown RBP3.54□□□□□ -1.84
DDB1-210ENST00000538129 NOTCH2NLQ7Z3S9 236 aa3.54□□□□□ -1.84
DDB1-210ENST00000538129 C14orf144Q96I85 54 aa3.54□□□□□ -1.84
DDB1-210ENST00000538129 HIGD1BQ9P298 99 aa3.54□□□□□ -1.84
DDB1-210ENST00000538129 TRAV13-2A0A0B4J235 113 aa3.53□□□□□ -1.84
DDB1-210ENST00000538129 A6NDN8 102 aa3.53□□□□□ -1.84
DDB1-210ENST00000538129 SLC25A34Q6PIV7 304 aa3.53□□□□□ -1.84
DDB1-210ENST00000538129 SMCR5Q8TEV8 140 aa3.53□□□□□ -1.84
DDB1-210ENST00000538129 HIST1H4GQ99525 98 aa3.53□□□□□ -1.84
DDB1-210ENST00000538129 HIGD2AQ9BW72 106 aa3.53□□□□□ -1.84
DDB1-210ENST00000538129 TRBV7-6A0A0J9YX20 115 aa3.52□□□□□ -1.85
DDB1-210ENST00000538129 CFC1BP0CG36 223 aa3.52□□□□□ -1.85
DDB1-210ENST00000538129 CFC1P0CG37 223 aa3.52□□□□□ -1.85
DDB1-210ENST00000538129 CRYGAP11844 174 aa3.52□□□□□ -1.85
DDB1-210ENST00000538129 KRTAP10-6P60371 365 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms