RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 COL7A1Q02388 2944 aa5.7□□□□□ -1.5
UBE3B-208ENST00000538070 SRRM2Q9UQ35 2752 aaKnown RBP5.7□□□□□ -1.5
UBE3B-208ENST00000538070 UPK3BQ9BT76 320 aa5.7□□□□□ -1.5
UBE3B-208ENST00000538070 V9GYY9 64 aa5.7□□□□□ -1.5
UBE3B-208ENST00000538070 C2orf48Q96LS8 159 aa5.69□□□□□ -1.5
UBE3B-208ENST00000538070 Q8N9L7 120 aa5.69□□□□□ -1.5
UBE3B-208ENST00000538070 OBSCN-AS1Q96MR7 158 aa5.69□□□□□ -1.5
UBE3B-208ENST00000538070 IMUPQ9GZP8 106 aa5.69□□□□□ -1.5
UBE3B-208ENST00000538070 Q6JHZ5 121 aa5.69□□□□□ -1.5
UBE3B-208ENST00000538070 DNAH10OSP0CZ25 163 aa5.68□□□□□ -1.5
UBE3B-208ENST00000538070 ELOF1P60002 83 aaKnown RBP5.68□□□□□ -1.5
UBE3B-208ENST00000538070 Q6ZQT0 140 aa5.68□□□□□ -1.5
UBE3B-208ENST00000538070 ST20-AS1Q8NBB2 130 aa5.68□□□□□ -1.5
UBE3B-208ENST00000538070 MUC7Q8TAX7 377 aa5.68□□□□□ -1.5
UBE3B-208ENST00000538070 MDFIQ99750 246 aa5.68□□□□□ -1.5
UBE3B-208ENST00000538070 GHRHP01286 108 aa5.68□□□□□ -1.5
UBE3B-208ENST00000538070 FUSP35637 526 aaKnown RBP eCLIP5.68□□□□□ -1.5
UBE3B-208ENST00000538070 LINC00167Q96N53 147 aa5.68□□□□□ -1.5
UBE3B-208ENST00000538070 A0A0G2JQZ4 141 aa5.67□□□□□ -1.5
UBE3B-208ENST00000538070 A0A1W2PNN7 141 aa5.67□□□□□ -1.5
UBE3B-208ENST00000538070 LOC107984640A0A0U1RRK4 108 aa5.67□□□□□ -1.5
UBE3B-208ENST00000538070 Q6ZVQ6 151 aa5.67□□□□□ -1.5
UBE3B-208ENST00000538070 ATOX1O00244 68 aa5.66□□□□□ -1.5
UBE3B-208ENST00000538070 RMI2Q96E14 147 aa5.66□□□□□ -1.5
UBE3B-208ENST00000538070 HIGD2AQ9BW72 106 aa5.66□□□□□ -1.5
UBE3B-208ENST00000538070 A0A0U1RQV1 116 aa5.66□□□□□ -1.5
UBE3B-208ENST00000538070 CHTF8P0CG12 524 aa5.66□□□□□ -1.5
UBE3B-208ENST00000538070 TM2D3Q9BRN9 247 aa5.66□□□□□ -1.5
UBE3B-208ENST00000538070 A0A096LNI7 61 aa5.65□□□□□ -1.5
UBE3B-208ENST00000538070 LYSTQ99698 3801 aa5.65□□□□□ -1.51
UBE3B-208ENST00000538070 CMYA5Q8N3K9 4069 aa5.65□□□□□ -1.51
UBE3B-208ENST00000538070 LINC00528Q8N1L1 170 aa5.65□□□□□ -1.51
UBE3B-208ENST00000538070 KRTAP1-5Q9BYS1 174 aa5.65□□□□□ -1.51
UBE3B-208ENST00000538070 LINC01547P58512 204 aaPredicted RBP5.64□□□□□ -1.51
UBE3B-208ENST00000538070 UQCRQO14949 82 aa5.64□□□□□ -1.51
UBE3B-208ENST00000538070 PRLHP81277 87 aa5.64□□□□□ -1.51
UBE3B-208ENST00000538070 COX7CP15954 63 aa5.64□□□□□ -1.51
UBE3B-208ENST00000538070 C20orf197Q8N268 126 aa5.63□□□□□ -1.51
UBE3B-208ENST00000538070 TGP01266 2768 aa5.63□□□□□ -1.51
UBE3B-208ENST00000538070 NREPQ16612 68 aa5.63□□□□□ -1.51
UBE3B-208ENST00000538070 ERC2-IT1O76042 136 aa5.63□□□□□ -1.51
UBE3B-208ENST00000538070 MRPL55Q7Z7F7 128 aaKnown RBP5.63□□□□□ -1.51
UBE3B-208ENST00000538070 CYSTM1Q9H1C7 97 aa5.63□□□□□ -1.51
UBE3B-208ENST00000538070 HRCT1Q6UXD1 115 aa5.62□□□□□ -1.51
UBE3B-208ENST00000538070 C4orf48Q5BLP8 95 aa5.62□□□□□ -1.51
UBE3B-208ENST00000538070 DEFB116Q30KQ4 102 aa5.61□□□□□ -1.51
UBE3B-208ENST00000538070 SNURFQ9Y675 71 aa5.61□□□□□ -1.51
UBE3B-208ENST00000538070 Q8N377 158 aa5.61□□□□□ -1.51
UBE3B-208ENST00000538070 SERP2Q8N6R1 65 aa5.61□□□□□ -1.51
UBE3B-208ENST00000538070 BPY2O14599 106 aa5.6□□□□□ -1.51
UBE3B-208ENST00000538070 Q9BRP9 147 aa5.6□□□□□ -1.51
UBE3B-208ENST00000538070 DNAH10Q8IVF4 4471 aa5.6□□□□□ -1.51
UBE3B-208ENST00000538070 HUWE1Q7Z6Z7 4374 aaKnown RBP5.6□□□□□ -1.51
UBE3B-208ENST00000538070 LOC110117498A0A087WWA1 95 aa5.6□□□□□ -1.51
UBE3B-208ENST00000538070 KCNQ1DNQ9H478 68 aa5.6□□□□□ -1.51
UBE3B-208ENST00000538070 IGLV1-50A0A075B6I6 118 aa5.59□□□□□ -1.51
UBE3B-208ENST00000538070 Q6ZRX8 168 aa5.59□□□□□ -1.51
UBE3B-208ENST00000538070 PHF5AQ7RTV0 110 aaKnown RBP5.59□□□□□ -1.51
UBE3B-208ENST00000538070 PDE6GP18545 87 aa5.59□□□□□ -1.52
UBE3B-208ENST00000538070 KRTAP7-1Q8IUC3 87 aa5.59□□□□□ -1.52
UBE3B-208ENST00000538070 REG3GQ6UW15 175 aa5.58□□□□□ -1.52
UBE3B-208ENST00000538070 TRBV7-4A0A0J9YYF1 115 aa5.58□□□□□ -1.52
UBE3B-208ENST00000538070 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
UBE3B-208ENST00000538070 F8WEM9 126 aa5.58□□□□□ -1.52
UBE3B-208ENST00000538070 ATP5EP2Q5VTU8 51 aa5.57□□□□□ -1.52
UBE3B-208ENST00000538070 FAM236DA0A1B0GTK5 79 aa5.57□□□□□ -1.52
UBE3B-208ENST00000538070 FAM236CP0DP71 79 aa5.57□□□□□ -1.52
UBE3B-208ENST00000538070 DHRS4-AS1Q9P1J3 65 aa5.57□□□□□ -1.52
UBE3B-208ENST00000538070 TRBV7-6A0A0J9YX20 115 aa5.56□□□□□ -1.52
UBE3B-208ENST00000538070 C4orf26Q17RF5 130 aa5.55□□□□□ -1.52
UBE3B-208ENST00000538070 PRYO14603 147 aa5.55□□□□□ -1.52
UBE3B-208ENST00000538070 H3BQ85 93 aa5.55□□□□□ -1.52
UBE3B-208ENST00000538070 UBE2AP49459 152 aa5.54□□□□□ -1.52
UBE3B-208ENST00000538070 APLNQ9ULZ1 77 aa5.54□□□□□ -1.52
UBE3B-208ENST00000538070 TLX1NBP0CAT3 122 aa5.53□□□□□ -1.52
UBE3B-208ENST00000538070 C1orf195Q5TG92 126 aa5.53□□□□□ -1.52
UBE3B-208ENST00000538070 A0A1W2PNM2 257 aa5.53□□□□□ -1.52
UBE3B-208ENST00000538070 CRYGAP11844 174 aa5.52□□□□□ -1.53
UBE3B-208ENST00000538070 FAM30AQ9NZY2 134 aa5.52□□□□□ -1.53
UBE3B-208ENST00000538070 FBN3Q75N90 2809 aa5.51□□□□□ -1.53
UBE3B-208ENST00000538070 C16orf90A8MZG2 172 aa5.51□□□□□ -1.53
UBE3B-208ENST00000538070 KRTAP11-1Q8IUC1 163 aa5.51□□□□□ -1.53
UBE3B-208ENST00000538070 LINC00476Q8WZB0 136 aa5.51□□□□□ -1.53
UBE3B-208ENST00000538070 B9D2Q9BPU9 175 aa5.51□□□□□ -1.53
UBE3B-208ENST00000538070 A0A087WSZ3 146 aa5.51□□□□□ -1.53
UBE3B-208ENST00000538070 NBDYA0A0U1RRE5 68 aa5.51□□□□□ -1.53
UBE3B-208ENST00000538070 PANO1I0J062 215 aa5.51□□□□□ -1.53
UBE3B-208ENST00000538070 DNAH3Q8TD57 4116 aa5.51□□□□□ -1.53
UBE3B-208ENST00000538070 CXCL6P80162 114 aa5.5□□□□□ -1.53
UBE3B-208ENST00000538070 J3KT08 172 aa5.5□□□□□ -1.53
UBE3B-208ENST00000538070 EPM2AB3EWF7 344 aa5.5□□□□□ -1.53
UBE3B-208ENST00000538070 KRTAP4-16G5E9R7 235 aaPredicted RBP5.49□□□□□ -1.53
UBE3B-208ENST00000538070 WFDC13Q8IUB5 93 aa5.49□□□□□ -1.53
UBE3B-208ENST00000538070 IGLV9-49A0A0B4J1Y8 123 aa5.49□□□□□ -1.53
UBE3B-208ENST00000538070 RPL37AP61513 92 aaKnown RBP5.49□□□□□ -1.53
UBE3B-208ENST00000538070 DNAH7Q8WXX0 4024 aa5.49□□□□□ -1.53
UBE3B-208ENST00000538070 TRAV7A0A075B6U4 112 aa5.49□□□□□ -1.53
UBE3B-208ENST00000538070 PLA2G2DQ9UNK4 145 aa5.48□□□□□ -1.53
UBE3B-208ENST00000538070 MEGF8Q7Z7M0 2845 aa5.48□□□□□ -1.53
UBE3B-208ENST00000538070 C14orf177Q52M58 125 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms