RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, human

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-206	ENST00000536823	CTAG1A	P78358	180 aa		4.15	□□□□□ -1.75
YBX3-206	ENST00000536823	MYMX	A0A1B0GTQ4	84 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	LINC00587	B1AMM8	73 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	LEPROT	O15243	131 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	ATP6V1G1	O75348	118 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	DPM2	O94777	84 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	CRYGA	P11844	174 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	FABP4	P15090	132 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	PRLH	P81277	87 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	FAM229B	Q4G0N7	80 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	MEIG1	Q5JSS6	88 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	FAM19A1	Q7Z5A9	133 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	BOD1L2	Q8IYS8	172 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	MIR7-3HG	Q8N6C7	128 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	PLEKHB2	Q96CS7	222 aa		4.14	□□□□□ -1.75
YBX3-206	ENST00000536823	HERVK_113	P61574	105 aa		4.13	□□□□□ -1.75
YBX3-206	ENST00000536823	TYMSOS	Q8TAI1	123 aa		4.13	□□□□□ -1.75
YBX3-206	ENST00000536823	PMCHL2	Q9BQD1	86 aa		4.13	□□□□□ -1.75
YBX3-206	ENST00000536823	MAP1LC3C	Q9BXW4	147 aa		4.13	□□□□□ -1.75
YBX3-206	ENST00000536823	ANAPC11	Q9NYG5	84 aa		4.13	□□□□□ -1.75
YBX3-206	ENST00000536823	LPA	P08519	4548 aa		4.13	□□□□□ -1.75
YBX3-206	ENST00000536823		J3QQQ9	107 aa		4.12	□□□□□ -1.75
YBX3-206	ENST00000536823	NCR3	O14931	201 aa		4.12	□□□□□ -1.75
YBX3-206	ENST00000536823	IGKC	P01834	107 aa		4.12	□□□□□ -1.75
YBX3-206	ENST00000536823	NMU	P48645	174 aa		4.12	□□□□□ -1.75
YBX3-206	ENST00000536823	KRTAP13-2	Q52LG2	175 aa		4.12	□□□□□ -1.75
YBX3-206	ENST00000536823	IGKV2D-26	A0A0A0MRZ7	120 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	IGLV9-49	A0A0B4J1Y8	123 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	LOC107984156	A0A0G2JMH3	177 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	HIST1H2BK	O60814	126 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	HIST1H2BJ	P06899	126 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	HIST1H2BO	P23527	126 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	HIST1H2BB	P33778	126 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	HIST1H2BD	P58876	126 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	KRTAP10-12	P60413	245 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	HIST1H2BC	P62807	126 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	HIST2H2BE	Q16778	126 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	ARL17A	Q8IVW1	177 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	HIST1H2BH	Q93079	126 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	HIST1H2BN	Q99877	126 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	HIST1H2BM	Q99879	126 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	KCNQ1DN	Q9H478	68 aa		4.11	□□□□□ -1.75
YBX3-206	ENST00000536823	TRBV10-3	A0A0K0K1G6	114 aa		4.1	□□□□□ -1.75
YBX3-206	ENST00000536823	TSPAN13	O95857	204 aa		4.1	□□□□□ -1.75
YBX3-206	ENST00000536823	LGALS3	P17931	250 aa	Known RBP	4.1	□□□□□ -1.75
YBX3-206	ENST00000536823	SPRR1A	P35321	89 aa		4.1	□□□□□ -1.75
YBX3-206	ENST00000536823	PRR4	Q16378	134 aa		4.1	□□□□□ -1.75
YBX3-206	ENST00000536823	LINC00337	Q8N6G1	96 aa		4.1	□□□□□ -1.75
YBX3-206	ENST00000536823	DAND5	Q8N907	189 aa		4.1	□□□□□ -1.75
YBX3-206	ENST00000536823	HIGD2A	Q9BW72	106 aa		4.1	□□□□□ -1.75
YBX3-206	ENST00000536823	TRBV10-2	A0A0K0K1G8	114 aa		4.09	□□□□□ -1.75
YBX3-206	ENST00000536823	ETDC	A0A1B0GVM5	59 aa		4.09	□□□□□ -1.75
YBX3-206	ENST00000536823		E9PLD3	99 aa		4.09	□□□□□ -1.75
YBX3-206	ENST00000536823	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.09	□□□□□ -1.75
YBX3-206	ENST00000536823	SYS1-DBNDD2	H3BUS1	97 aa		4.09	□□□□□ -1.75
YBX3-206	ENST00000536823	LINC00304	Q8N9R0	145 aa		4.09	□□□□□ -1.75
YBX3-206	ENST00000536823	SPRR4	Q96PI1	79 aa		4.09	□□□□□ -1.75
YBX3-206	ENST00000536823	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.09	□□□□□ -1.75
YBX3-206	ENST00000536823	LINC01545	Q5VT33	79 aa		4.08	□□□□□ -1.76
YBX3-206	ENST00000536823	C3orf22	Q8N5N4	141 aa		4.08	□□□□□ -1.76
YBX3-206	ENST00000536823	MIEN1	Q9BRT3	115 aa		4.08	□□□□□ -1.76
YBX3-206	ENST00000536823	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.08	□□□□□ -1.76
YBX3-206	ENST00000536823		A0A0J9YXY3	114 aa		4.07	□□□□□ -1.76
YBX3-206	ENST00000536823	NDUFC2	O95298	119 aa		4.07	□□□□□ -1.76
YBX3-206	ENST00000536823	DDT	P30046	118 aa		4.07	□□□□□ -1.76
YBX3-206	ENST00000536823	S100A12	P80511	92 aa		4.07	□□□□□ -1.76
YBX3-206	ENST00000536823	COA6	Q5JTJ3	125 aa	Known RBP	4.07	□□□□□ -1.76
YBX3-206	ENST00000536823	SOSTDC1	Q6X4U4	206 aa		4.07	□□□□□ -1.76
YBX3-206	ENST00000536823	IGLV6-57	P01721	117 aa		4.06	□□□□□ -1.76
YBX3-206	ENST00000536823	LINC01547	P58512	204 aa	Predicted RBP	4.06	□□□□□ -1.76
YBX3-206	ENST00000536823	SMCR5	Q8TEV8	140 aa		4.06	□□□□□ -1.76
YBX3-206	ENST00000536823	TIMM17B	O60830	172 aa		4.05	□□□□□ -1.76
YBX3-206	ENST00000536823	S100A6	P06703	90 aa		4.05	□□□□□ -1.76
YBX3-206	ENST00000536823	C3orf79	P0CE67	100 aa		4.05	□□□□□ -1.76
YBX3-206	ENST00000536823	NPC2	P61916	151 aa		4.05	□□□□□ -1.76
YBX3-206	ENST00000536823	LINC00483	Q53H64	154 aa		4.05	□□□□□ -1.76
YBX3-206	ENST00000536823	S100A7L2	Q5SY68	101 aa		4.05	□□□□□ -1.76
YBX3-206	ENST00000536823	ADAMTSL4-AS1	Q5T5F5	129 aa		4.05	□□□□□ -1.76
YBX3-206	ENST00000536823		Q6ZRX8	168 aa		4.05	□□□□□ -1.76
YBX3-206	ENST00000536823	LITAF	Q99732	161 aa		4.05	□□□□□ -1.76
YBX3-206	ENST00000536823	TRAV23DV6	A0A075B6W5	121 aa		4.04	□□□□□ -1.76
YBX3-206	ENST00000536823	ZNF815P	A8K554	130 aa		4.04	□□□□□ -1.76
YBX3-206	ENST00000536823	ERC2-IT1	O76042	136 aa		4.04	□□□□□ -1.76
YBX3-206	ENST00000536823	KRTAP5-2	Q701N4	177 aa		4.04	□□□□□ -1.76
YBX3-206	ENST00000536823		Q9BRP9	147 aa		4.04	□□□□□ -1.76
YBX3-206	ENST00000536823	PPDPF	Q9H3Y8	114 aa		4.04	□□□□□ -1.76
YBX3-206	ENST00000536823	C20orf202	A1L168	122 aa		4.03	□□□□□ -1.76
YBX3-206	ENST00000536823	KRTDAP	P60985	99 aa		4.03	□□□□□ -1.76
YBX3-206	ENST00000536823	SPAG11A	Q6PDA7	123 aa		4.03	□□□□□ -1.76
YBX3-206	ENST00000536823	LINC00308	Q8TCZ7	52 aa		4.03	□□□□□ -1.76
YBX3-206	ENST00000536823	RETNLB	Q9BQ08	111 aa		4.03	□□□□□ -1.76
YBX3-206	ENST00000536823	TTTY13	Q9BZ97	58 aa		4.03	□□□□□ -1.76
YBX3-206	ENST00000536823	SPANXC	Q9NY87	97 aa		4.03	□□□□□ -1.76
YBX3-206	ENST00000536823	CBY1	Q9Y3M2	126 aa		4.03	□□□□□ -1.76
YBX3-206	ENST00000536823	MUC2	Q02817	5179 aa		4.02	□□□□□ -1.77
YBX3-206	ENST00000536823	ZNF73	O43830	326 aa	Predicted RBP	4.02	□□□□□ -1.77
YBX3-206	ENST00000536823	JOSD1	Q15040	202 aa	Predicted RBP	4.02	□□□□□ -1.77
YBX3-206	ENST00000536823		Q8NBF4	154 aa		4.02	□□□□□ -1.77
YBX3-206	ENST00000536823	MOBP	Q13875	183 aa		4.01	□□□□□ -1.77

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