RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 CHTOPQ9Y3Y2 248 aaKnown RBP3.56□□□□□ -1.84
CCDC60-203ENST00000536742 IGKV2-24A0A0C4DH68 120 aa3.55□□□□□ -1.84
CCDC60-203ENST00000536742 IGIPA6NJ69 53 aa3.55□□□□□ -1.84
CCDC60-203ENST00000536742 PCP4L1A6NKN8 68 aa3.55□□□□□ -1.84
CCDC60-203ENST00000536742 DPM2O94777 84 aa3.55□□□□□ -1.84
CCDC60-203ENST00000536742 HERVK_113P61574 105 aa3.55□□□□□ -1.84
CCDC60-203ENST00000536742 RBX1P62877 108 aa3.55□□□□□ -1.84
CCDC60-203ENST00000536742 HERVK_113P63121 156 aa3.55□□□□□ -1.84
CCDC60-203ENST00000536742 COX6A2Q02221 97 aa3.55□□□□□ -1.84
CCDC60-203ENST00000536742 MIAQ16674 131 aa3.55□□□□□ -1.84
CCDC60-203ENST00000536742 NTM-AS1Q6ZSK4 140 aa3.55□□□□□ -1.84
CCDC60-203ENST00000536742 CST9LQ9H4G1 147 aa3.55□□□□□ -1.84
CCDC60-203ENST00000536742 CDC42SE2Q9NRR3 84 aa3.55□□□□□ -1.84
CCDC60-203ENST00000536742 TRAV13-1A0A0B4J241 112 aa3.54□□□□□ -1.84
CCDC60-203ENST00000536742 IGKV3OR2-268A0A0C4DH90 116 aa3.54□□□□□ -1.84
CCDC60-203ENST00000536742 F8VRH5 84 aa3.54□□□□□ -1.84
CCDC60-203ENST00000536742 APOMO95445 188 aa3.54□□□□□ -1.84
CCDC60-203ENST00000536742 IGKCP01834 107 aa3.54□□□□□ -1.84
CCDC60-203ENST00000536742 C3orf79P0CE67 100 aa3.54□□□□□ -1.84
CCDC60-203ENST00000536742 REG3AQ06141 175 aa3.54□□□□□ -1.84
CCDC60-203ENST00000536742 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
CCDC60-203ENST00000536742 A0A096LNJ9 63 aa3.53□□□□□ -1.84
CCDC60-203ENST00000536742 TINCRA0A1B0GVN0 87 aa3.53□□□□□ -1.84
CCDC60-203ENST00000536742 JOSD1Q15040 202 aaPredicted RBP3.53□□□□□ -1.84
CCDC60-203ENST00000536742 MPV17L2Q567V2 206 aa3.53□□□□□ -1.84
CCDC60-203ENST00000536742 C1orf137Q5JT78 98 aa3.53□□□□□ -1.84
CCDC60-203ENST00000536742 TMEM170BQ5T4T1 132 aa3.53□□□□□ -1.84
CCDC60-203ENST00000536742 LINC01545Q5VT33 79 aa3.53□□□□□ -1.84
CCDC60-203ENST00000536742 LINC00269Q8N2A0 174 aa3.53□□□□□ -1.84
CCDC60-203ENST00000536742 LINC00469Q8N7U9 141 aa3.53□□□□□ -1.84
CCDC60-203ENST00000536742 AMELXQ99217 191 aa3.53□□□□□ -1.84
CCDC60-203ENST00000536742 KRTAP2-1Q9BYU5 128 aa3.53□□□□□ -1.84
CCDC60-203ENST00000536742 IGLV7-43P04211 117 aa3.52□□□□□ -1.85
CCDC60-203ENST00000536742 SMIM6P0DI80 62 aa3.52□□□□□ -1.85
CCDC60-203ENST00000536742 Q6ZUT4 128 aa3.52□□□□□ -1.85
CCDC60-203ENST00000536742 MRPL35Q9NZE8 188 aaKnown RBP3.52□□□□□ -1.85
CCDC60-203ENST00000536742 IGLV4-60A0A075B6I1 120 aa3.51□□□□□ -1.85
CCDC60-203ENST00000536742 IGLV10-54A0A075B6I4 117 aa3.51□□□□□ -1.85
CCDC60-203ENST00000536742 LINC00959A0A1B0GUT2 108 aa3.51□□□□□ -1.85
CCDC60-203ENST00000536742 COX7A2LO14548 114 aa3.51□□□□□ -1.85
CCDC60-203ENST00000536742 IGLC3P0DOY3 106 aa3.51□□□□□ -1.85
CCDC60-203ENST00000536742 CTAG1AP78358 180 aa3.51□□□□□ -1.85
CCDC60-203ENST00000536742 RNASE13Q5GAN3 156 aaKnown RBP3.51□□□□□ -1.85
CCDC60-203ENST00000536742 SFTA2Q6UW10 78 aa3.51□□□□□ -1.85
CCDC60-203ENST00000536742 FAM104AQ969W3 186 aa3.51□□□□□ -1.85
CCDC60-203ENST00000536742 PLEKHB2Q96CS7 222 aa3.51□□□□□ -1.85
CCDC60-203ENST00000536742 VAMP8Q9BV40 100 aa3.51□□□□□ -1.85
CCDC60-203ENST00000536742 C11orf86A6NJI1 115 aa3.5□□□□□ -1.85
CCDC60-203ENST00000536742 LINC00587B1AMM8 73 aa3.5□□□□□ -1.85
CCDC60-203ENST00000536742 LGALS3P17931 250 aaKnown RBP3.5□□□□□ -1.85
CCDC60-203ENST00000536742 XCL1P47992 114 aa3.5□□□□□ -1.85
CCDC60-203ENST00000536742 ENHOQ6UWT2 76 aa3.5□□□□□ -1.85
CCDC60-203ENST00000536742 FAM19A3Q7Z5A8 133 aa3.5□□□□□ -1.85
CCDC60-203ENST00000536742 PMCHL2Q9BQD1 86 aa3.5□□□□□ -1.85
CCDC60-203ENST00000536742 PKIGQ9Y2B9 76 aa3.5□□□□□ -1.85
CCDC60-203ENST00000536742 IGHV1-58A0A0C4DH39 117 aa3.49□□□□□ -1.85
CCDC60-203ENST00000536742 TSTD3H0UI37 97 aa3.49□□□□□ -1.85
CCDC60-203ENST00000536742 CXCL5P42830 114 aa3.49□□□□□ -1.85
CCDC60-203ENST00000536742 NMUP48645 174 aa3.49□□□□□ -1.85
CCDC60-203ENST00000536742 CKS1BP61024 79 aa3.49□□□□□ -1.85
CCDC60-203ENST00000536742 C6orf226Q5I0X4 101 aa3.49□□□□□ -1.85
CCDC60-203ENST00000536742 CLPSL2Q6UWE3 100 aa3.49□□□□□ -1.85
CCDC60-203ENST00000536742 COX6B2Q6YFQ2 88 aa3.49□□□□□ -1.85
CCDC60-203ENST00000536742 A0A096LNI7 61 aa3.48□□□□□ -1.85
CCDC60-203ENST00000536742 MYMXA0A1B0GTQ4 84 aa3.48□□□□□ -1.85
CCDC60-203ENST00000536742 LEPROTO15243 131 aa3.48□□□□□ -1.85
CCDC60-203ENST00000536742 ZNF22P17026 224 aaPredicted RBP3.48□□□□□ -1.85
CCDC60-203ENST00000536742 SPATA45Q537H7 98 aa3.48□□□□□ -1.85
CCDC60-203ENST00000536742 PYY3Q5JQD4 70 aa3.48□□□□□ -1.85
CCDC60-203ENST00000536742 FP248Q71RG6 208 aaPredicted RBP3.48□□□□□ -1.85
CCDC60-203ENST00000536742 C5orf38Q86SI9 138 aa3.48□□□□□ -1.85
CCDC60-203ENST00000536742 ATOH7Q8N100 152 aa3.48□□□□□ -1.85
CCDC60-203ENST00000536742 COPS9Q8WXC6 57 aa3.48□□□□□ -1.85
CCDC60-203ENST00000536742 C12orf57Q99622 126 aa3.48□□□□□ -1.85
CCDC60-203ENST00000536742 TOMM7Q9P0U1 55 aa3.48□□□□□ -1.85
CCDC60-203ENST00000536742 CDKN2A-AS1Q9UH64 79 aa3.48□□□□□ -1.85
CCDC60-203ENST00000536742 IGLV4-69A0A075B6H9 119 aa3.47□□□□□ -1.85
CCDC60-203ENST00000536742 IGHV3OR16-9A0A0B4J2B5 98 aa3.47□□□□□ -1.85
CCDC60-203ENST00000536742 TMEM223A0PJW6 202 aa3.47□□□□□ -1.85
CCDC60-203ENST00000536742 J3QQQ9 107 aa3.47□□□□□ -1.85
CCDC60-203ENST00000536742 SPINK8P0C7L1 97 aa3.47□□□□□ -1.85
CCDC60-203ENST00000536742 KIAA0087Q14695 138 aa3.47□□□□□ -1.85
CCDC60-203ENST00000536742 SLC25A34Q6PIV7 304 aa3.47□□□□□ -1.85
CCDC60-203ENST00000536742 SCGB1D4Q6XE38 83 aa3.47□□□□□ -1.85
CCDC60-203ENST00000536742 COX7B2Q8TF08 81 aa3.47□□□□□ -1.85
CCDC60-203ENST00000536742 ORAOV1Q8WV07 137 aa3.47□□□□□ -1.85
CCDC60-203ENST00000536742 NDUFA1O15239 70 aa3.46□□□□□ -1.86
CCDC60-203ENST00000536742 Q8IZM0 81 aa3.46□□□□□ -1.86
CCDC60-203ENST00000536742 UQCR10Q9UDW1 63 aa3.46□□□□□ -1.86
CCDC60-203ENST00000536742 NDUFA12Q9UI09 145 aa3.46□□□□□ -1.86
CCDC60-203ENST00000536742 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
CCDC60-203ENST00000536742 ZNF815PA8K554 130 aa3.45□□□□□ -1.86
CCDC60-203ENST00000536742 DLEU1O43261 78 aa3.45□□□□□ -1.86
CCDC60-203ENST00000536742 COX8AP10176 69 aa3.45□□□□□ -1.86
CCDC60-203ENST00000536742 SPAG11BQ08648 103 aa3.45□□□□□ -1.86
CCDC60-203ENST00000536742 MEIG1Q5JSS6 88 aa3.45□□□□□ -1.86
CCDC60-203ENST00000536742 BOD1L2Q8IYS8 172 aa3.45□□□□□ -1.86
CCDC60-203ENST00000536742 CAMK2N2Q96S95 79 aa3.45□□□□□ -1.86
CCDC60-203ENST00000536742 FLGP20930 4061 aaPredicted RBP3.44□□□□□ -1.86
CCDC60-203ENST00000536742 TRBV30A0A0K0K1B3 111 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms