RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 HIST1H2BHQ93079 126 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 HIST1H2BNQ99877 126 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 HIST1H2BMQ99879 126 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 Q9BRP9 147 aa8.16□□□□□ -1.1
RTN3P1-201ENST00000536295 TRAV23DV6A0A075B6W5 121 aa8.15□□□□□ -1.1
RTN3P1-201ENST00000536295 Q6ZRX8 168 aa8.15□□□□□ -1.1
RTN3P1-201ENST00000536295 MOBPQ13875 183 aa8.14□□□□□ -1.11
RTN3P1-201ENST00000536295 A0A0U1RQV1 116 aa8.13□□□□□ -1.11
RTN3P1-201ENST00000536295 ZNF73O43830 326 aaPredicted RBP8.12□□□□□ -1.11
RTN3P1-201ENST00000536295 MUC17Q685J3 4493 aa8.11□□□□□ -1.11
RTN3P1-201ENST00000536295 SPINK1P00995 79 aa8.11□□□□□ -1.11
RTN3P1-201ENST00000536295 JOSD1Q15040 202 aaPredicted RBP8.11□□□□□ -1.11
RTN3P1-201ENST00000536295 LINC01545Q5VT33 79 aa8.11□□□□□ -1.11
RTN3P1-201ENST00000536295 PET117Q6UWS5 81 aa8.1□□□□□ -1.11
RTN3P1-201ENST00000536295 FP248Q71RG6 208 aaPredicted RBP8.1□□□□□ -1.11
RTN3P1-201ENST00000536295 OR13C6PQ8NH95 151 aa8.1□□□□□ -1.11
RTN3P1-201ENST00000536295 LINC00308Q8TCZ7 52 aa8.1□□□□□ -1.11
RTN3P1-201ENST00000536295 LITAFQ99732 161 aa8.1□□□□□ -1.11
RTN3P1-201ENST00000536295 ZNF815PA8K554 130 aa8.09□□□□□ -1.11
RTN3P1-201ENST00000536295 ST20-AS1Q8NBB2 130 aa8.09□□□□□ -1.11
RTN3P1-201ENST00000536295 TTTY13Q9BZ97 58 aa8.09□□□□□ -1.11
RTN3P1-201ENST00000536295 SPANXCQ9NY87 97 aa8.09□□□□□ -1.11
RTN3P1-201ENST00000536295 C3orf79P0CE67 100 aa8.08□□□□□ -1.12
RTN3P1-201ENST00000536295 HINT1P49773 126 aaPredicted RBP8.08□□□□□ -1.12
RTN3P1-201ENST00000536295 C9orf153Q5TBE3 101 aa8.08□□□□□ -1.12
RTN3P1-201ENST00000536295 SSBP3-AS1Q7Z2R9 100 aa8.08□□□□□ -1.12
RTN3P1-201ENST00000536295 TIMM17BO60830 172 aa8.07□□□□□ -1.12
RTN3P1-201ENST00000536295 KRTDAPP60985 99 aa8.07□□□□□ -1.12
RTN3P1-201ENST00000536295 CBY1Q9Y3M2 126 aa8.07□□□□□ -1.12
RTN3P1-201ENST00000536295 FAT4Q6V0I7 4981 aa8.06□□□□□ -1.12
RTN3P1-201ENST00000536295 KRTAP13-3Q3SY46 172 aa8.05□□□□□ -1.12
RTN3P1-201ENST00000536295 Q8N377 158 aa8.04□□□□□ -1.12
RTN3P1-201ENST00000536295 RPS29P62273 56 aaKnown RBP8.03□□□□□ -1.12
RTN3P1-201ENST00000536295 SPANXDQ9BXN6 97 aa8.03□□□□□ -1.12
RTN3P1-201ENST00000536295 COA6Q5JTJ3 125 aaKnown RBP8.02□□□□□ -1.13
RTN3P1-201ENST00000536295 SCGB1D4Q6XE38 83 aa8.02□□□□□ -1.13
RTN3P1-201ENST00000536295 C20orf202A1L168 122 aa8.01□□□□□ -1.13
RTN3P1-201ENST00000536295 SLC25A20O43772 301 aa8.01□□□□□ -1.13
RTN3P1-201ENST00000536295 ATOH7Q8N100 152 aa8.01□□□□□ -1.13
RTN3P1-201ENST00000536295 DHRS4-AS1Q9P1J3 65 aa8.01□□□□□ -1.13
RTN3P1-201ENST00000536295 C5orf52A6NGY3 159 aa8□□□□□ -1.13
RTN3P1-201ENST00000536295 COX7BP24311 80 aa8□□□□□ -1.13
RTN3P1-201ENST00000536295 C6orf99Q4VX62 202 aa8□□□□□ -1.13
RTN3P1-201ENST00000536295 ANKRD39Q53RE8 183 aa8□□□□□ -1.13
RTN3P1-201ENST00000536295 LINC00518Q8N0U6 118 aa8□□□□□ -1.13
RTN3P1-201ENST00000536295 ELOF1P60002 83 aaKnown RBP7.98□□□□□ -1.13
RTN3P1-201ENST00000536295 HRCT1Q6UXD1 115 aa7.98□□□□□ -1.13
RTN3P1-201ENST00000536295 SPRR1BP22528 89 aa7.97□□□□□ -1.13
RTN3P1-201ENST00000536295 SLC25A34Q6PIV7 304 aa7.97□□□□□ -1.13
RTN3P1-201ENST00000536295 DEFB105AQ8NG35 78 aa7.97□□□□□ -1.13
RTN3P1-201ENST00000536295 LCE2AQ5TA79 106 aaPredicted RBP7.96□□□□□ -1.14
RTN3P1-201ENST00000536295 LAMTOR3Q9UHA4 124 aa7.96□□□□□ -1.14
RTN3P1-201ENST00000536295 A6NDN8 102 aa7.95□□□□□ -1.14
RTN3P1-201ENST00000536295 TAL2Q16559 108 aa7.95□□□□□ -1.14
RTN3P1-201ENST00000536295 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
RTN3P1-201ENST00000536295 PCP2Q8IVA1 136 aa7.95□□□□□ -1.14
RTN3P1-201ENST00000536295 COPS9Q8WXC6 57 aa7.95□□□□□ -1.14
RTN3P1-201ENST00000536295 IFITM1P13164 125 aa7.94□□□□□ -1.14
RTN3P1-201ENST00000536295 Q1RN00 199 aa7.94□□□□□ -1.14
RTN3P1-201ENST00000536295 MUSTN1Q8IVN3 82 aa7.94□□□□□ -1.14
RTN3P1-201ENST00000536295 SEC61BP60468 96 aaKnown RBP7.93□□□□□ -1.14
RTN3P1-201ENST00000536295 LIMD2Q9BT23 127 aa7.92□□□□□ -1.14
RTN3P1-201ENST00000536295 TRBV7-6A0A0J9YX20 115 aa7.91□□□□□ -1.14
RTN3P1-201ENST00000536295 Q6ZVH6 145 aa7.91□□□□□ -1.14
RTN3P1-201ENST00000536295 TEX49A0A1B0GTD5 131 aa7.9□□□□□ -1.14
RTN3P1-201ENST00000536295 A0A1B0GWB2 263 aa7.9□□□□□ -1.14
RTN3P1-201ENST00000536295 AKR1D1P51857 326 aa7.9□□□□□ -1.14
RTN3P1-201ENST00000536295 XP32Q5T750 250 aa7.9□□□□□ -1.14
RTN3P1-201ENST00000536295 KRTAP4-1Q9BYQ7 146 aa7.9□□□□□ -1.14
RTN3P1-201ENST00000536295 PRO1933Q9H354 126 aa7.88□□□□□ -1.15
RTN3P1-201ENST00000536295 TRAV13-2A0A0B4J235 113 aa7.87□□□□□ -1.15
RTN3P1-201ENST00000536295 H7C2G1 150 aa7.87□□□□□ -1.15
RTN3P1-201ENST00000536295 S100A2P29034 98 aa7.87□□□□□ -1.15
RTN3P1-201ENST00000536295 SNRPEP62304 92 aaKnown RBP7.87□□□□□ -1.15
RTN3P1-201ENST00000536295 HIST3H2BBQ8N257 126 aa7.87□□□□□ -1.15
RTN3P1-201ENST00000536295 LINC01547P58512 204 aaPredicted RBP7.86□□□□□ -1.15
RTN3P1-201ENST00000536295 SMIM29Q86T20 159 aa7.86□□□□□ -1.15
RTN3P1-201ENST00000536295 SMIM11BQ8TCY0 68 aa7.86□□□□□ -1.15
RTN3P1-201ENST00000536295 HIST1H2BLQ99880 126 aa7.86□□□□□ -1.15
RTN3P1-201ENST00000536295 KRTAP9-2Q9BYQ4 174 aa7.86□□□□□ -1.15
RTN3P1-201ENST00000536295 A0A0G2JQZ4 141 aa7.85□□□□□ -1.15
RTN3P1-201ENST00000536295 C9orf92A6NGG3 77 aa7.85□□□□□ -1.15
RTN3P1-201ENST00000536295 IGLV5-48A0A075B6I7 105 aa7.84□□□□□ -1.15
RTN3P1-201ENST00000536295 A4D1N5 150 aa7.84□□□□□ -1.15
RTN3P1-201ENST00000536295 HSBP1L1C9JCN9 74 aa7.84□□□□□ -1.15
RTN3P1-201ENST00000536295 CD164Q04900 197 aa7.84□□□□□ -1.15
RTN3P1-201ENST00000536295 NHP2Q9NX24 153 aaKnown RBP7.83□□□□□ -1.16
RTN3P1-201ENST00000536295 S100A6P06703 90 aa7.8□□□□□ -1.16
RTN3P1-201ENST00000536295 VAMP3Q15836 100 aa7.79□□□□□ -1.16
RTN3P1-201ENST00000536295 PCOTHQ58A44 107 aa7.78□□□□□ -1.16
RTN3P1-201ENST00000536295 F8WEM9 126 aa7.77□□□□□ -1.17
RTN3P1-201ENST00000536295 C1orf195Q5TG92 126 aa7.77□□□□□ -1.17
RTN3P1-201ENST00000536295 Q5XG85 94 aa7.77□□□□□ -1.17
RTN3P1-201ENST00000536295 LINC00575Q6W349 94 aa7.77□□□□□ -1.17
RTN3P1-201ENST00000536295 C12orf57Q99622 126 aa7.77□□□□□ -1.17
RTN3P1-201ENST00000536295 SCGB1D1O95968 90 aa7.76□□□□□ -1.17
RTN3P1-201ENST00000536295 S100A1P23297 94 aa7.76□□□□□ -1.17
RTN3P1-201ENST00000536295 IGLV8-61A0A075B6I0 122 aa7.75□□□□□ -1.17
RTN3P1-201ENST00000536295 hADV29S1A0JD25 119 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 187.7 ms