RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PDE6GP18545 87 aa8.71□□□□□ -1.01
VPS33B-202ENST00000535906 SERTAD4-AS1Q5TG53 156 aa8.7□□□□□ -1.02
VPS33B-202ENST00000535906 CRYGAP11844 174 aa8.69□□□□□ -1.02
VPS33B-202ENST00000535906 M0R2N4 97 aa8.69□□□□□ -1.02
VPS33B-202ENST00000535906 TLX1NBP0CAT3 122 aa8.69□□□□□ -1.02
VPS33B-202ENST00000535906 RMI2Q96E14 147 aa8.69□□□□□ -1.02
VPS33B-202ENST00000535906 SERP2Q8N6R1 65 aa8.68□□□□□ -1.02
VPS33B-202ENST00000535906 LINC00528Q8N1L1 170 aa8.68□□□□□ -1.02
VPS33B-202ENST00000535906 TRBV7-4A0A0J9YYF1 115 aa8.67□□□□□ -1.02
VPS33B-202ENST00000535906 FAM19A1Q7Z5A9 133 aa8.67□□□□□ -1.02
VPS33B-202ENST00000535906 KRTAP1-5Q9BYS1 174 aa8.67□□□□□ -1.02
VPS33B-202ENST00000535906 NKAPP1Q8N9T2 125 aa8.66□□□□□ -1.02
VPS33B-202ENST00000535906 CSMD3Q7Z407 3707 aa8.66□□□□□ -1.02
VPS33B-202ENST00000535906 DNAH10Q8IVF4 4471 aa8.66□□□□□ -1.02
VPS33B-202ENST00000535906 FAM168BA1KXE4 195 aa8.65□□□□□ -1.02
VPS33B-202ENST00000535906 C7orf33Q8WU49 177 aa8.65□□□□□ -1.02
VPS33B-202ENST00000535906 Q6ZVQ6 151 aa8.65□□□□□ -1.02
VPS33B-202ENST00000535906 B9D2Q9BPU9 175 aa8.64□□□□□ -1.03
VPS33B-202ENST00000535906 KCNQ1DNQ9H478 68 aa8.64□□□□□ -1.03
VPS33B-202ENST00000535906 TENM2Q9NT68 2774 aa8.64□□□□□ -1.03
VPS33B-202ENST00000535906 APLNQ9ULZ1 77 aa8.64□□□□□ -1.03
VPS33B-202ENST00000535906 LINC01547P58512 204 aaPredicted RBP8.63□□□□□ -1.03
VPS33B-202ENST00000535906 KRTAP7-1Q8IUC3 87 aa8.63□□□□□ -1.03
VPS33B-202ENST00000535906 SMIM20Q8N5G0 67 aa8.63□□□□□ -1.03
VPS33B-202ENST00000535906 PLA2G2DQ9UNK4 145 aa8.63□□□□□ -1.03
VPS33B-202ENST00000535906 DNAH7Q8WXX0 4024 aa8.63□□□□□ -1.03
VPS33B-202ENST00000535906 RPL37AP8A6NKH3 93 aa8.61□□□□□ -1.03
VPS33B-202ENST00000535906 HAMPP81172 84 aa8.61□□□□□ -1.03
VPS33B-202ENST00000535906 CXCL6P80162 114 aa8.61□□□□□ -1.03
VPS33B-202ENST00000535906 UBE2DNLQ8IWF7 75 aa8.61□□□□□ -1.03
VPS33B-202ENST00000535906 DYNC2H1Q8NCM8 4307 aaKnown RBP8.61□□□□□ -1.03
VPS33B-202ENST00000535906 IGLV5-37A0A075B6J1 123 aa8.6□□□□□ -1.03
VPS33B-202ENST00000535906 CYSTM1Q9H1C7 97 aa8.6□□□□□ -1.03
VPS33B-202ENST00000535906 IGLV1-50A0A075B6I6 118 aa8.59□□□□□ -1.03
VPS33B-202ENST00000535906 LOC107984640A0A0U1RRK4 108 aa8.59□□□□□ -1.03
VPS33B-202ENST00000535906 FAM19A5Q7Z5A7 132 aaPredicted RBP8.58□□□□□ -1.04
VPS33B-202ENST00000535906 KRTAP4-16G5E9R7 235 aaPredicted RBP8.57□□□□□ -1.04
VPS33B-202ENST00000535906 PSCAO43653 123 aa8.56□□□□□ -1.04
VPS33B-202ENST00000535906 BCE1O60756 84 aa8.56□□□□□ -1.04
VPS33B-202ENST00000535906 PLECQ15149 4684 aaKnown RBP8.56□□□□□ -1.04
VPS33B-202ENST00000535906 MRPL55Q7Z7F7 128 aaKnown RBP8.55□□□□□ -1.04
VPS33B-202ENST00000535906 PRYO14603 147 aa8.55□□□□□ -1.04
VPS33B-202ENST00000535906 SPRR1AP35321 89 aa8.55□□□□□ -1.04
VPS33B-202ENST00000535906 Q6ZRX8 168 aa8.55□□□□□ -1.04
VPS33B-202ENST00000535906 Q9BRP9 147 aa8.54□□□□□ -1.04
VPS33B-202ENST00000535906 TMEM258P61165 79 aa8.54□□□□□ -1.04
VPS33B-202ENST00000535906 Q8N377 158 aa8.54□□□□□ -1.04
VPS33B-202ENST00000535906 DHRS4-AS1Q9P1J3 65 aa8.54□□□□□ -1.04
VPS33B-202ENST00000535906 CNBPP62633 177 aaKnown RBP8.53□□□□□ -1.04
VPS33B-202ENST00000535906 PRKDCP78527 4128 aaKnown RBP8.53□□□□□ -1.04
VPS33B-202ENST00000535906 A0A096LNI7 61 aa8.53□□□□□ -1.04
VPS33B-202ENST00000535906 DEFB105AQ8NG35 78 aa8.53□□□□□ -1.04
VPS33B-202ENST00000535906 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.52□□□□□ -1.05
VPS33B-202ENST00000535906 ETDCA0A1B0GVM5 59 aa8.52□□□□□ -1.05
VPS33B-202ENST00000535906 TRAV7A0A075B6U4 112 aa8.51□□□□□ -1.05
VPS33B-202ENST00000535906 IGKV2-24A0A0C4DH68 120 aa8.51□□□□□ -1.05
VPS33B-202ENST00000535906 SCXQ7RTU7 201 aa8.51□□□□□ -1.05
VPS33B-202ENST00000535906 IGLV5-48A0A075B6I7 105 aa8.51□□□□□ -1.05
VPS33B-202ENST00000535906 C16orf90A8MZG2 172 aa8.51□□□□□ -1.05
VPS33B-202ENST00000535906 NUPR2A6NF83 97 aa8.5□□□□□ -1.05
VPS33B-202ENST00000535906 A0A1W2PNN7 141 aa8.49□□□□□ -1.05
VPS33B-202ENST00000535906 STARD9Q9P2P6 4700 aa8.49□□□□□ -1.05
VPS33B-202ENST00000535906 J3KT08 172 aa8.49□□□□□ -1.05
VPS33B-202ENST00000535906 NBDYA0A0U1RRE5 68 aa8.48□□□□□ -1.05
VPS33B-202ENST00000535906 RPS28P62857 69 aaKnown RBP8.48□□□□□ -1.05
VPS33B-202ENST00000535906 C20orf197Q8N268 126 aa8.48□□□□□ -1.05
VPS33B-202ENST00000535906 ST20-AS1Q8NBB2 130 aa8.48□□□□□ -1.05
VPS33B-202ENST00000535906 ERC2-IT1O76042 136 aa8.48□□□□□ -1.05
VPS33B-202ENST00000535906 NREPQ16612 68 aa8.48□□□□□ -1.05
VPS33B-202ENST00000535906 REG3GQ6UW15 175 aa8.48□□□□□ -1.05
VPS33B-202ENST00000535906 MEGF8Q7Z7M0 2845 aa8.47□□□□□ -1.05
VPS33B-202ENST00000535906 LRCOL1A6NCL2 159 aa8.46□□□□□ -1.05
VPS33B-202ENST00000535906 C14orf177Q52M58 125 aa8.46□□□□□ -1.05
VPS33B-202ENST00000535906 C3orf84H3BNL1 204 aa8.45□□□□□ -1.06
VPS33B-202ENST00000535906 TNP2Q05952 138 aa8.45□□□□□ -1.06
VPS33B-202ENST00000535906 A0A1B0GW54 56 aa8.45□□□□□ -1.06
VPS33B-202ENST00000535906 CHTF8P0CG12 524 aa8.45□□□□□ -1.06
VPS33B-202ENST00000535906 UBE2BP63146 152 aa8.45□□□□□ -1.06
VPS33B-202ENST00000535906 DPH3Q96FX2 82 aa8.45□□□□□ -1.06
VPS33B-202ENST00000535906 Q6ZRN7 208 aaPredicted RBP8.44□□□□□ -1.06
VPS33B-202ENST00000535906 DNHD1Q96M86 4753 aa8.44□□□□□ -1.06
VPS33B-202ENST00000535906 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
VPS33B-202ENST00000535906 IGKV4-1P06312 121 aa8.43□□□□□ -1.06
VPS33B-202ENST00000535906 KLKP1Q107X0 134 aa8.42□□□□□ -1.06
VPS33B-202ENST00000535906 C1orf137Q5JT78 98 aa8.42□□□□□ -1.06
VPS33B-202ENST00000535906 C9orf163Q8N9P6 203 aa8.42□□□□□ -1.06
VPS33B-202ENST00000535906 A0A1W2PNM2 257 aa8.42□□□□□ -1.06
VPS33B-202ENST00000535906 BPY2O14599 106 aa8.42□□□□□ -1.06
VPS33B-202ENST00000535906 Q8N9L7 120 aa8.42□□□□□ -1.06
VPS33B-202ENST00000535906 VPS13DQ5THJ4 4388 aa8.42□□□□□ -1.06
VPS33B-202ENST00000535906 KRTAP11-1Q8IUC1 163 aa8.41□□□□□ -1.06
VPS33B-202ENST00000535906 PRLHP81277 87 aa8.4□□□□□ -1.06
VPS33B-202ENST00000535906 PHF5AQ7RTV0 110 aaKnown RBP8.4□□□□□ -1.06
VPS33B-202ENST00000535906 Q8NBF4 154 aa8.4□□□□□ -1.07
VPS33B-202ENST00000535906 H7BZZ5 65 aa8.39□□□□□ -1.07
VPS33B-202ENST00000535906 SPRR4Q96PI1 79 aa8.39□□□□□ -1.07
VPS33B-202ENST00000535906 KMT2AQ03164 3969 aa8.37□□□□□ -1.07
VPS33B-202ENST00000535906 PANO1I0J062 215 aa8.37□□□□□ -1.07
VPS33B-202ENST00000535906 SMIM29Q86T20 159 aa8.37□□□□□ -1.07
VPS33B-202ENST00000535906 SNURFQ9Y675 71 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms