RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 FAM19A1Q7Z5A9 133 aa11.95□□□□□ -0.5
LTBR-205ENST00000535739 MIEN1Q9BRT3 115 aa11.95□□□□□ -0.5
LTBR-205ENST00000535739 TMEM126AQ9H061 195 aa11.95□□□□□ -0.5
LTBR-205ENST00000535739 HIGD1BQ9P298 99 aa11.95□□□□□ -0.5
LTBR-205ENST00000535739 C2orf91Q6ZV80 131 aa11.94□□□□□ -0.5
LTBR-205ENST00000535739 SPANXDQ9BXN6 97 aa11.94□□□□□ -0.5
LTBR-205ENST00000535739 SPANXCQ9NY87 97 aa11.94□□□□□ -0.5
LTBR-205ENST00000535739 Q6ZVH6 145 aa11.93□□□□□ -0.5
LTBR-205ENST00000535739 SPANXB1Q9NS25 103 aaPredicted RBP11.93□□□□□ -0.5
LTBR-205ENST00000535739 FAT4Q6V0I7 4981 aa11.93□□□□□ -0.5
LTBR-205ENST00000535739 TSTD3H0UI37 97 aa11.92□□□□□ -0.5
LTBR-205ENST00000535739 Q8NDZ9 215 aa11.92□□□□□ -0.5
LTBR-205ENST00000535739 MUC17Q685J3 4493 aa11.91□□□□□ -0.5
LTBR-205ENST00000535739 M0R378 163 aa11.91□□□□□ -0.5
LTBR-205ENST00000535739 LOC107984156A0A0G2JMH3 177 aa11.9□□□□□ -0.5
LTBR-205ENST00000535739 IFITM1P13164 125 aa11.9□□□□□ -0.5
LTBR-205ENST00000535739 NPC2P61916 151 aa11.9□□□□□ -0.5
LTBR-205ENST00000535739 RPL24P83731 157 aaKnown RBP11.9□□□□□ -0.5
LTBR-205ENST00000535739 ARL17AQ8IVW1 177 aa11.9□□□□□ -0.5
LTBR-205ENST00000535739 LINC00308Q8TCZ7 52 aa11.9□□□□□ -0.5
LTBR-205ENST00000535739 HIST1H4GQ99525 98 aa11.9□□□□□ -0.5
LTBR-205ENST00000535739 SOSTDC1Q6X4U4 206 aa11.89□□□□□ -0.51
LTBR-205ENST00000535739 MUSTN1Q8IVN3 82 aa11.89□□□□□ -0.51
LTBR-205ENST00000535739 COPS9Q8WXC6 57 aa11.89□□□□□ -0.51
LTBR-205ENST00000535739 EIF4EBP3O60516 100 aaPredicted RBP11.88□□□□□ -0.51
LTBR-205ENST00000535739 C3orf22Q8N5N4 141 aa11.87□□□□□ -0.51
LTBR-205ENST00000535739 CDIP1Q9H305 208 aa11.87□□□□□ -0.51
LTBR-205ENST00000535739 IGLV7-46A0A075B6I9 117 aa11.86□□□□□ -0.51
LTBR-205ENST00000535739 TPRXLQ17RH7 258 aa11.86□□□□□ -0.51
LTBR-205ENST00000535739 LCE2AQ5TA79 106 aaPredicted RBP11.86□□□□□ -0.51
LTBR-205ENST00000535739 TAL2Q16559 108 aa11.85□□□□□ -0.51
LTBR-205ENST00000535739 KRTAP9-2Q9BYQ4 174 aa11.85□□□□□ -0.51
LTBR-205ENST00000535739 PPDPFQ9H3Y8 114 aa11.85□□□□□ -0.51
LTBR-205ENST00000535739 HIGD2AQ9BW72 106 aa11.84□□□□□ -0.51
LTBR-205ENST00000535739 CTAG1AP78358 180 aa11.82□□□□□ -0.52
LTBR-205ENST00000535739 HSD52Q0P140 79 aa11.82□□□□□ -0.52
LTBR-205ENST00000535739 NDUFC2O95298 119 aa11.81□□□□□ -0.52
LTBR-205ENST00000535739 CEND1Q8N111 149 aa11.81□□□□□ -0.52
LTBR-205ENST00000535739 DDTP30046 118 aa11.79□□□□□ -0.52
LTBR-205ENST00000535739 A4D1N5 150 aa11.78□□□□□ -0.52
LTBR-205ENST00000535739 SPRR4Q96PI1 79 aa11.78□□□□□ -0.52
LTBR-205ENST00000535739 TRBV10-2A0A0K0K1G8 114 aa11.75□□□□□ -0.53
LTBR-205ENST00000535739 NCR3O14931 201 aa11.75□□□□□ -0.53
LTBR-205ENST00000535739 SPAG11AQ6PDA7 123 aa11.75□□□□□ -0.53
LTBR-205ENST00000535739 FXYD2P54710 66 aa11.74□□□□□ -0.53
LTBR-205ENST00000535739 TMEM238LA0A1B0GVL6 79 aa11.72□□□□□ -0.53
LTBR-205ENST00000535739 A6NJY4 79 aa11.72□□□□□ -0.53
LTBR-205ENST00000535739 BVES-AS1Q5T3Y7 98 aa11.72□□□□□ -0.53
LTBR-205ENST00000535739 ZNF706Q9Y5V0 76 aaPredicted RBP11.72□□□□□ -0.53
LTBR-205ENST00000535739 M0R143 59 aa11.71□□□□□ -0.53
LTBR-205ENST00000535739 PRYO14603 147 aa11.71□□□□□ -0.53
LTBR-205ENST00000535739 HINT1P49773 126 aaPredicted RBP11.71□□□□□ -0.53
LTBR-205ENST00000535739 C4orf48Q5BLP8 95 aa11.71□□□□□ -0.53
LTBR-205ENST00000535739 PCP4L1A6NKN8 68 aa11.7□□□□□ -0.54
LTBR-205ENST00000535739 CFC1BP0CG36 223 aa11.7□□□□□ -0.54
LTBR-205ENST00000535739 CFC1P0CG37 223 aa11.7□□□□□ -0.54
LTBR-205ENST00000535739 TRAV13-2A0A0B4J235 113 aa11.69□□□□□ -0.54
LTBR-205ENST00000535739 S100A7L2Q5SY68 101 aa11.69□□□□□ -0.54
LTBR-205ENST00000535739 LINC00337Q8N6G1 96 aa11.69□□□□□ -0.54
LTBR-205ENST00000535739 Q8NBF4 154 aa11.69□□□□□ -0.54
LTBR-205ENST00000535739 OR13C6PQ8NH95 151 aa11.69□□□□□ -0.54
LTBR-205ENST00000535739 SMCR5Q8TEV8 140 aa11.69□□□□□ -0.54
LTBR-205ENST00000535739 A6NDN8 102 aa11.68□□□□□ -0.54
LTBR-205ENST00000535739 SPRR1AP35321 89 aa11.68□□□□□ -0.54
LTBR-205ENST00000535739 FP248Q71RG6 208 aaPredicted RBP11.68□□□□□ -0.54
LTBR-205ENST00000535739 KCNQ1DNQ9H478 68 aa11.68□□□□□ -0.54
LTBR-205ENST00000535739 TRBV10-3A0A0K0K1G6 114 aa11.67□□□□□ -0.54
LTBR-205ENST00000535739 IGLV6-57P01721 117 aa11.67□□□□□ -0.54
LTBR-205ENST00000535739 A0A0B4J2C4 111 aa11.66□□□□□ -0.54
LTBR-205ENST00000535739 KRTAP4-16G5E9R7 235 aaPredicted RBP11.66□□□□□ -0.54
LTBR-205ENST00000535739 RAB37Q96AX2 223 aa11.66□□□□□ -0.54
LTBR-205ENST00000535739 NHP2Q9NX24 153 aaKnown RBP11.66□□□□□ -0.54
LTBR-205ENST00000535739 ETDCA0A1B0GVM5 59 aa11.65□□□□□ -0.54
LTBR-205ENST00000535739 KRTAP13-3Q3SY46 172 aa11.64□□□□□ -0.55
LTBR-205ENST00000535739 A0A1B0GWB2 263 aa11.63□□□□□ -0.55
LTBR-205ENST00000535739 BATFQ16520 125 aa11.62□□□□□ -0.55
LTBR-205ENST00000535739 PRO1854Q9UHT4 67 aa11.62□□□□□ -0.55
LTBR-205ENST00000535739 SPINK1P00995 79 aa11.61□□□□□ -0.55
LTBR-205ENST00000535739 LINC00483Q53H64 154 aa11.61□□□□□ -0.55
LTBR-205ENST00000535739 CBY1Q9Y3M2 126 aa11.61□□□□□ -0.55
LTBR-205ENST00000535739 K7ERJ3 54 aa11.6□□□□□ -0.55
LTBR-205ENST00000535739 GAGE2AQ6NT46 116 aa11.6□□□□□ -0.55
LTBR-205ENST00000535739 TRAV23DV6A0A075B6W5 121 aa11.59□□□□□ -0.55
LTBR-205ENST00000535739 B5MCH6 92 aa11.58□□□□□ -0.56
LTBR-205ENST00000535739 ERC2-IT1O76042 136 aa11.58□□□□□ -0.56
LTBR-205ENST00000535739 H7C2G1 150 aa11.57□□□□□ -0.56
LTBR-205ENST00000535739 MOBPQ13875 183 aa11.57□□□□□ -0.56
LTBR-205ENST00000535739 ASB16-AS1Q495Z4 193 aa11.57□□□□□ -0.56
LTBR-205ENST00000535739 SMIM11BQ8TCY0 68 aa11.57□□□□□ -0.56
LTBR-205ENST00000535739 IGLV9-49A0A0B4J1Y8 123 aa11.56□□□□□ -0.56
LTBR-205ENST00000535739 SNHG12Q9BXW3 62 aa11.56□□□□□ -0.56
LTBR-205ENST00000535739 ZNF73O43830 326 aaPredicted RBP11.55□□□□□ -0.56
LTBR-205ENST00000535739 Q9BRP9 147 aa11.54□□□□□ -0.56
LTBR-205ENST00000535739 KRTAP4-1Q9BYQ7 146 aa11.54□□□□□ -0.56
LTBR-205ENST00000535739 KRTAP9-6A0A140TA67 174 aa11.53□□□□□ -0.56
LTBR-205ENST00000535739 Q1RN00 199 aa11.53□□□□□ -0.56
LTBR-205ENST00000535739 C6orf99Q4VX62 202 aa11.52□□□□□ -0.57
LTBR-205ENST00000535739 SSBP3-AS1Q7Z2R9 100 aa11.52□□□□□ -0.57
LTBR-205ENST00000535739 Q8N377 158 aa11.52□□□□□ -0.57
LTBR-205ENST00000535739 Q6ZRX8 168 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms