RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 NCR3O14931 201 aa4.18□□□□□ -1.74
CLIP1-206ENST00000535290 RGS21Q2M5E4 152 aa4.18□□□□□ -1.74
CLIP1-206ENST00000535290 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
CLIP1-206ENST00000535290 C1orf195Q5TG92 126 aa4.18□□□□□ -1.74
CLIP1-206ENST00000535290 TOMM6Q96B49 74 aa4.18□□□□□ -1.74
CLIP1-206ENST00000535290 CST9LQ9H4G1 147 aa4.18□□□□□ -1.74
CLIP1-206ENST00000535290 RPL23P62829 140 aaKnown RBP4.17□□□□□ -1.74
CLIP1-206ENST00000535290 ST20-AS1Q8NBB2 130 aa4.17□□□□□ -1.74
CLIP1-206ENST00000535290 LAMTOR2Q9Y2Q5 125 aa4.17□□□□□ -1.74
CLIP1-206ENST00000535290 H3BRM9 83 aa4.16□□□□□ -1.74
CLIP1-206ENST00000535290 H7C2G1 150 aa4.16□□□□□ -1.74
CLIP1-206ENST00000535290 LINC00158P58513 81 aa4.16□□□□□ -1.74
CLIP1-206ENST00000535290 HERV-K104P63124 156 aa4.16□□□□□ -1.74
CLIP1-206ENST00000535290 Q6ZRX8 168 aa4.16□□□□□ -1.74
CLIP1-206ENST00000535290 BOD1L2Q8IYS8 172 aa4.16□□□□□ -1.74
CLIP1-206ENST00000535290 SCGB3A1Q96QR1 104 aa4.16□□□□□ -1.74
CLIP1-206ENST00000535290 K7EMI3 77 aa4.15□□□□□ -1.75
CLIP1-206ENST00000535290 SRP19P09132 144 aaKnown RBP4.15□□□□□ -1.75
CLIP1-206ENST00000535290 LGALS3P17931 250 aaKnown RBP4.15□□□□□ -1.75
CLIP1-206ENST00000535290 ADIRFQ15847 76 aa4.15□□□□□ -1.75
CLIP1-206ENST00000535290 PMVKQ15126 192 aa4.14□□□□□ -1.75
CLIP1-206ENST00000535290 ATP11AUNQ6ZP68 121 aa4.14□□□□□ -1.75
CLIP1-206ENST00000535290 NXT2Q9NPJ8 142 aaKnown RBP4.13□□□□□ -1.75
CLIP1-206ENST00000535290 KMT2DO14686 5537 aa4.12□□□□□ -1.75
CLIP1-206ENST00000535290 ZNF22P17026 224 aaPredicted RBP4.12□□□□□ -1.75
CLIP1-206ENST00000535290 G0S2P27469 103 aa4.12□□□□□ -1.75
CLIP1-206ENST00000535290 Q5XG85 94 aa4.12□□□□□ -1.75
CLIP1-206ENST00000535290 SMIM29Q86T20 159 aa4.12□□□□□ -1.75
CLIP1-206ENST00000535290 SLC51BQ86UW2 128 aa4.12□□□□□ -1.75
CLIP1-206ENST00000535290 IGLC3P0DOY3 106 aa4.11□□□□□ -1.75
CLIP1-206ENST00000535290 S100A12P80511 92 aa4.11□□□□□ -1.75
CLIP1-206ENST00000535290 CD164Q04900 197 aa4.11□□□□□ -1.75
CLIP1-206ENST00000535290 VAMP3Q15836 100 aa4.11□□□□□ -1.75
CLIP1-206ENST00000535290 ALKAL2Q6UX46 152 aa4.11□□□□□ -1.75
CLIP1-206ENST00000535290 ATP5L2Q7Z4Y8 100 aa4.11□□□□□ -1.75
CLIP1-206ENST00000535290 C20orf166-AS1Q96NR2 134 aa4.11□□□□□ -1.75
CLIP1-206ENST00000535290 SMIM13P0DJ93 91 aa4.1□□□□□ -1.75
CLIP1-206ENST00000535290 SPRR1BP22528 89 aa4.1□□□□□ -1.75
CLIP1-206ENST00000535290 DDTP30046 118 aa4.1□□□□□ -1.75
CLIP1-206ENST00000535290 TRBV20-1A0A075B6N2 111 aa4.09□□□□□ -1.75
CLIP1-206ENST00000535290 C9JQL5 133 aa4.09□□□□□ -1.75
CLIP1-206ENST00000535290 SFTA2Q6UW10 78 aa4.09□□□□□ -1.75
CLIP1-206ENST00000535290 MIR7-3HGQ8N6C7 128 aa4.09□□□□□ -1.75
CLIP1-206ENST00000535290 NAT8Q9UHE5 227 aa4.09□□□□□ -1.75
CLIP1-206ENST00000535290 A0A0G2JQZ4 141 aa4.08□□□□□ -1.76
CLIP1-206ENST00000535290 KRTAP2-3P0C7H8 128 aa4.08□□□□□ -1.76
CLIP1-206ENST00000535290 JOSD1Q15040 202 aaPredicted RBP4.08□□□□□ -1.76
CLIP1-206ENST00000535290 Q1RN00 199 aa4.08□□□□□ -1.76
CLIP1-206ENST00000535290 KRTAP2-4Q9BYR9 128 aa4.08□□□□□ -1.76
CLIP1-206ENST00000535290 LAMTOR3Q9UHA4 124 aa4.08□□□□□ -1.76
CLIP1-206ENST00000535290 SLC25A34Q6PIV7 304 aa4.07□□□□□ -1.76
CLIP1-206ENST00000535290 UQCC3Q6UW78 93 aa4.07□□□□□ -1.76
CLIP1-206ENST00000535290 OBSCN-AS1Q96MR7 158 aa4.07□□□□□ -1.76
CLIP1-206ENST00000535290 PRO1933Q9H354 126 aa4.07□□□□□ -1.76
CLIP1-206ENST00000535290 NDUFA6P56556 154 aa4.06□□□□□ -1.76
CLIP1-206ENST00000535290 C10orf91Q5T1B1 145 aa4.06□□□□□ -1.76
CLIP1-206ENST00000535290 MDN1Q9NU22 5596 aa4.05□□□□□ -1.76
CLIP1-206ENST00000535290 FAM236DA0A1B0GTK5 79 aa4.05□□□□□ -1.76
CLIP1-206ENST00000535290 C11orf86A6NJI1 115 aa4.05□□□□□ -1.76
CLIP1-206ENST00000535290 FAM236CP0DP71 79 aa4.05□□□□□ -1.76
CLIP1-206ENST00000535290 C5orf47Q569G3 176 aa4.05□□□□□ -1.76
CLIP1-206ENST00000535290 MEIG1Q5JSS6 88 aa4.05□□□□□ -1.76
CLIP1-206ENST00000535290 TMEM170BQ5T4T1 132 aa4.05□□□□□ -1.76
CLIP1-206ENST00000535290 TRBV10-2A0A0K0K1G8 114 aa4.04□□□□□ -1.76
CLIP1-206ENST00000535290 LINC01546A6NGU7 62 aa4.04□□□□□ -1.76
CLIP1-206ENST00000535290 LINC01549A6NIU2 74 aa4.04□□□□□ -1.76
CLIP1-206ENST00000535290 ZNF73O43830 326 aaPredicted RBP4.04□□□□□ -1.76
CLIP1-206ENST00000535290 PCP2Q8IVA1 136 aa4.04□□□□□ -1.76
CLIP1-206ENST00000535290 TRAV23DV6A0A075B6W5 121 aa4.03□□□□□ -1.76
CLIP1-206ENST00000535290 AKR1D1P51857 326 aa4.03□□□□□ -1.76
CLIP1-206ENST00000535290 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
CLIP1-206ENST00000535290 C6orf99Q4VX62 202 aa4.02□□□□□ -1.77
CLIP1-206ENST00000535290 S100A7L2Q5SY68 101 aa4.02□□□□□ -1.77
CLIP1-206ENST00000535290 FA2HQ7L5A8 372 aa4.02□□□□□ -1.77
CLIP1-206ENST00000535290 LOC107984156A0A0G2JMH3 177 aa4.01□□□□□ -1.77
CLIP1-206ENST00000535290 HSBP1O75506 76 aa4.01□□□□□ -1.77
CLIP1-206ENST00000535290 ARL17AQ8IVW1 177 aa4.01□□□□□ -1.77
CLIP1-206ENST00000535290 Q8N9P0 234 aaPredicted RBP4.01□□□□□ -1.77
CLIP1-206ENST00000535290 DEFB105AQ8NG35 78 aa4.01□□□□□ -1.77
CLIP1-206ENST00000535290 SPANXB1Q9NS25 103 aaPredicted RBP4.01□□□□□ -1.77
CLIP1-206ENST00000535290 LOC105371267A0A1B0GV96 52 aa4□□□□□ -1.77
CLIP1-206ENST00000535290 TCL1BO95988 128 aa4□□□□□ -1.77
CLIP1-206ENST00000535290 Q96NJ1 140 aa4□□□□□ -1.77
CLIP1-206ENST00000535290 MAP1LC3CQ9BXW4 147 aa4□□□□□ -1.77
CLIP1-206ENST00000535290 A0A096LNJ9 63 aa3.99□□□□□ -1.77
CLIP1-206ENST00000535290 TMEM223A0PJW6 202 aa3.99□□□□□ -1.77
CLIP1-206ENST00000535290 TAL2Q16559 108 aa3.99□□□□□ -1.77
CLIP1-206ENST00000535290 BAGE3Q86Y29 109 aa3.99□□□□□ -1.77
CLIP1-206ENST00000535290 TCTE3Q8IZS6 198 aa3.98□□□□□ -1.77
CLIP1-206ENST00000535290 DHRS4-AS1Q9P1J3 65 aa3.98□□□□□ -1.77
CLIP1-206ENST00000535290 TEX49A0A1B0GTD5 131 aa3.97□□□□□ -1.77
CLIP1-206ENST00000535290 KRTAP16-1A8MUX0 517 aa3.97□□□□□ -1.77
CLIP1-206ENST00000535290 LINC00587B1AMM8 73 aa3.97□□□□□ -1.77
CLIP1-206ENST00000535290 HINT1P49773 126 aaPredicted RBP3.97□□□□□ -1.77
CLIP1-206ENST00000535290 A8MUU9 505 aa3.96□□□□□ -1.78
CLIP1-206ENST00000535290 NDUFC2O95298 119 aa3.96□□□□□ -1.78
CLIP1-206ENST00000535290 HRES1P13985 223 aa3.96□□□□□ -1.78
CLIP1-206ENST00000535290 PEA15Q15121 130 aa3.96□□□□□ -1.78
CLIP1-206ENST00000535290 IGFL1Q6UW32 110 aa3.96□□□□□ -1.78
CLIP1-206ENST00000535290 HBDP02042 147 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms