RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 TRAV23DV6A0A075B6W5 121 aa10.62□□□□□ -0.71
NDUFS3-213ENST00000534716 EIF4EBP3O60516 100 aaPredicted RBP10.62□□□□□ -0.71
NDUFS3-213ENST00000534716 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
NDUFS3-213ENST00000534716 MOBPQ13875 183 aa10.61□□□□□ -0.71
NDUFS3-213ENST00000534716 IGLV9-49A0A0B4J1Y8 123 aa10.6□□□□□ -0.71
NDUFS3-213ENST00000534716 C5orf52A6NGY3 159 aa10.6□□□□□ -0.71
NDUFS3-213ENST00000534716 ZNF73O43830 326 aaPredicted RBP10.6□□□□□ -0.71
NDUFS3-213ENST00000534716 SYS1-DBNDD2H3BUS1 97 aa10.59□□□□□ -0.71
NDUFS3-213ENST00000534716 Q8N377 158 aa10.59□□□□□ -0.71
NDUFS3-213ENST00000534716 CBY1Q9Y3M2 126 aa10.59□□□□□ -0.71
NDUFS3-213ENST00000534716 LITAFQ99732 161 aa10.58□□□□□ -0.72
NDUFS3-213ENST00000534716 TIMM17BO60830 172 aa10.57□□□□□ -0.72
NDUFS3-213ENST00000534716 NPC2P61916 151 aa10.57□□□□□ -0.72
NDUFS3-213ENST00000534716 ASB16-AS1Q495Z4 193 aa10.56□□□□□ -0.72
NDUFS3-213ENST00000534716 SPANXCQ9NY87 97 aa10.56□□□□□ -0.72
NDUFS3-213ENST00000534716 SLC25A20O43772 301 aa10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 HIST1H2BKO60814 126 aa10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 HIST1H2BJP06899 126 aa10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 HIST1H2BOP23527 126 aa10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 HIST1H2BBP33778 126 aa10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 HIST1H2BDP58876 126 aa10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 HIST1H2BCP62807 126 aa10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 HIST2H2BEQ16778 126 aa10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 LINC01545Q5VT33 79 aa10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 LINC00308Q8TCZ7 52 aa10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 HIST1H2BHQ93079 126 aa10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 HIST1H2BNQ99877 126 aa10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 HIST1H2BMQ99879 126 aa10.55□□□□□ -0.72
NDUFS3-213ENST00000534716 HINT1P49773 126 aaPredicted RBP10.53□□□□□ -0.72
NDUFS3-213ENST00000534716 PET117Q6UWS5 81 aa10.53□□□□□ -0.72
NDUFS3-213ENST00000534716 ST20-AS1Q8NBB2 130 aa10.52□□□□□ -0.73
NDUFS3-213ENST00000534716 SPRR1BP22528 89 aa10.5□□□□□ -0.73
NDUFS3-213ENST00000534716 C9orf153Q5TBE3 101 aa10.49□□□□□ -0.73
NDUFS3-213ENST00000534716 SPANXDQ9BXN6 97 aa10.49□□□□□ -0.73
NDUFS3-213ENST00000534716 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
NDUFS3-213ENST00000534716 ZNF815PA8K554 130 aa10.48□□□□□ -0.73
NDUFS3-213ENST00000534716 SEC61BP60468 96 aaKnown RBP10.47□□□□□ -0.73
NDUFS3-213ENST00000534716 LINC00518Q8N0U6 118 aa10.47□□□□□ -0.73
NDUFS3-213ENST00000534716 OR13C6PQ8NH95 151 aa10.47□□□□□ -0.73
NDUFS3-213ENST00000534716 SLC25A34Q6PIV7 304 aa10.46□□□□□ -0.73
NDUFS3-213ENST00000534716 C3orf79P0CE67 100 aa10.45□□□□□ -0.74
NDUFS3-213ENST00000534716 XP32Q5T750 250 aa10.45□□□□□ -0.74
NDUFS3-213ENST00000534716 ELOF1P60002 83 aaKnown RBP10.44□□□□□ -0.74
NDUFS3-213ENST00000534716 COA6Q5JTJ3 125 aaKnown RBP10.44□□□□□ -0.74
NDUFS3-213ENST00000534716 TTTY13Q9BZ97 58 aa10.44□□□□□ -0.74
NDUFS3-213ENST00000534716 KRTAP4-1Q9BYQ7 146 aa10.42□□□□□ -0.74
NDUFS3-213ENST00000534716 COX7BP24311 80 aa10.41□□□□□ -0.74
NDUFS3-213ENST00000534716 TRBV7-6A0A0J9YX20 115 aa10.4□□□□□ -0.74
NDUFS3-213ENST00000534716 C6orf99Q4VX62 202 aa10.4□□□□□ -0.74
NDUFS3-213ENST00000534716 LAMTOR3Q9UHA4 124 aa10.4□□□□□ -0.74
NDUFS3-213ENST00000534716 LIMD2Q9BT23 127 aa10.39□□□□□ -0.75
NDUFS3-213ENST00000534716 KRTDAPP60985 99 aa10.38□□□□□ -0.75
NDUFS3-213ENST00000534716 COPS9Q8WXC6 57 aa10.38□□□□□ -0.75
NDUFS3-213ENST00000534716 IFITM1P13164 125 aa10.37□□□□□ -0.75
NDUFS3-213ENST00000534716 CRCT1Q9UGL9 99 aa10.37□□□□□ -0.75
NDUFS3-213ENST00000534716 FSIP2Q5CZC0 6907 aa10.37□□□□□ -0.75
NDUFS3-213ENST00000534716 SCGB1D4Q6XE38 83 aa10.36□□□□□ -0.75
NDUFS3-213ENST00000534716 Q6ZVH6 145 aa10.36□□□□□ -0.75
NDUFS3-213ENST00000534716 C20orf202A1L168 122 aa10.35□□□□□ -0.75
NDUFS3-213ENST00000534716 CD164Q04900 197 aa10.35□□□□□ -0.75
NDUFS3-213ENST00000534716 TEX49A0A1B0GTD5 131 aa10.34□□□□□ -0.75
NDUFS3-213ENST00000534716 TAL2Q16559 108 aa10.34□□□□□ -0.75
NDUFS3-213ENST00000534716 ANKRD39Q53RE8 183 aa10.34□□□□□ -0.75
NDUFS3-213ENST00000534716 A0A1B0GWB2 263 aa10.33□□□□□ -0.76
NDUFS3-213ENST00000534716 AKR1D1P51857 326 aa10.33□□□□□ -0.76
NDUFS3-213ENST00000534716 LINC01547P58512 204 aaPredicted RBP10.33□□□□□ -0.76
NDUFS3-213ENST00000534716 HRCT1Q6UXD1 115 aa10.32□□□□□ -0.76
NDUFS3-213ENST00000534716 SMIM29Q86T20 159 aa10.31□□□□□ -0.76
NDUFS3-213ENST00000534716 PRO1933Q9H354 126 aa10.31□□□□□ -0.76
NDUFS3-213ENST00000534716 IGLV5-48A0A075B6I7 105 aa10.3□□□□□ -0.76
NDUFS3-213ENST00000534716 Q1RN00 199 aa10.3□□□□□ -0.76
NDUFS3-213ENST00000534716 Q5XG85 94 aa10.3□□□□□ -0.76
NDUFS3-213ENST00000534716 DEFB105AQ8NG35 78 aa10.3□□□□□ -0.76
NDUFS3-213ENST00000534716 MUSTN1Q8IVN3 82 aa10.29□□□□□ -0.76
NDUFS3-213ENST00000534716 A4D1N5 150 aa10.28□□□□□ -0.76
NDUFS3-213ENST00000534716 A6NDN8 102 aa10.28□□□□□ -0.76
NDUFS3-213ENST00000534716 PCP2Q8IVA1 136 aa10.28□□□□□ -0.76
NDUFS3-213ENST00000534716 ATOH7Q8N100 152 aa10.27□□□□□ -0.77
NDUFS3-213ENST00000534716 H7C2G1 150 aa10.26□□□□□ -0.77
NDUFS3-213ENST00000534716 SNRPEP62304 92 aaKnown RBP10.26□□□□□ -0.77
NDUFS3-213ENST00000534716 KRTAP3-3Q9BYR6 98 aa10.26□□□□□ -0.77
NDUFS3-213ENST00000534716 KRTAP3-2Q9BYR7 98 aa10.26□□□□□ -0.77
NDUFS3-213ENST00000534716 TRAV13-2A0A0B4J235 113 aa10.25□□□□□ -0.77
NDUFS3-213ENST00000534716 SMIM11BQ8TCY0 68 aa10.23□□□□□ -0.77
NDUFS3-213ENST00000534716 NHP2Q9NX24 153 aaKnown RBP10.23□□□□□ -0.77
NDUFS3-213ENST00000534716 LCE2CQ5TA81 110 aa10.22□□□□□ -0.77
NDUFS3-213ENST00000534716 C9orf92A6NGG3 77 aa10.21□□□□□ -0.77
NDUFS3-213ENST00000534716 PCOTHQ58A44 107 aa10.2□□□□□ -0.78
NDUFS3-213ENST00000534716 C1orf195Q5TG92 126 aa10.2□□□□□ -0.78
NDUFS3-213ENST00000534716 KRTAP19-2Q3LHN2 52 aa10.19□□□□□ -0.78
NDUFS3-213ENST00000534716 A0A0G2JQZ4 141 aa10.16□□□□□ -0.78
NDUFS3-213ENST00000534716 IGLV8-61A0A075B6I0 122 aa10.15□□□□□ -0.78
NDUFS3-213ENST00000534716 HIST3H2BBQ8N257 126 aa10.15□□□□□ -0.78
NDUFS3-213ENST00000534716 HIST1H2BLQ99880 126 aa10.15□□□□□ -0.78
NDUFS3-213ENST00000534716 VAMP3Q15836 100 aa10.14□□□□□ -0.79
NDUFS3-213ENST00000534716 LINC00575Q6W349 94 aa10.14□□□□□ -0.79
NDUFS3-213ENST00000534716 TCL1BO95988 128 aa10.11□□□□□ -0.79
NDUFS3-213ENST00000534716 HSBP1L1C9JCN9 74 aa10.1□□□□□ -0.79
NDUFS3-213ENST00000534716 S100A2P29034 98 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 1263.3 ms