RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 HIST1H2BOP23527 126 aa12.18□□□□□ -0.46
GSDMD-216ENST00000534602 HIST1H2BBP33778 126 aa12.18□□□□□ -0.46
GSDMD-216ENST00000534602 HIST1H2BDP58876 126 aa12.18□□□□□ -0.46
GSDMD-216ENST00000534602 HIST1H2BCP62807 126 aa12.18□□□□□ -0.46
GSDMD-216ENST00000534602 HIST2H2BEQ16778 126 aa12.18□□□□□ -0.46
GSDMD-216ENST00000534602 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.18□□□□□ -0.46
GSDMD-216ENST00000534602 HIST1H2BHQ93079 126 aa12.18□□□□□ -0.46
GSDMD-216ENST00000534602 HIST1H2BNQ99877 126 aa12.18□□□□□ -0.46
GSDMD-216ENST00000534602 HIST1H2BMQ99879 126 aa12.18□□□□□ -0.46
GSDMD-216ENST00000534602 ZNF73O43830 326 aaPredicted RBP12.17□□□□□ -0.46
GSDMD-216ENST00000534602 RPS29P62273 56 aaKnown RBP12.17□□□□□ -0.46
GSDMD-216ENST00000534602 MOBPQ13875 183 aa12.17□□□□□ -0.46
GSDMD-216ENST00000534602 MUC17Q685J3 4493 aa12.17□□□□□ -0.46
GSDMD-216ENST00000534602 IGLV9-49A0A0B4J1Y8 123 aa12.15□□□□□ -0.46
GSDMD-216ENST00000534602 C5orf52A6NGY3 159 aa12.15□□□□□ -0.46
GSDMD-216ENST00000534602 TIMM17BO60830 172 aa12.15□□□□□ -0.46
GSDMD-216ENST00000534602 NPC2P61916 151 aa12.15□□□□□ -0.46
GSDMD-216ENST00000534602 LINC01545Q5VT33 79 aa12.15□□□□□ -0.46
GSDMD-216ENST00000534602 PET117Q6UWS5 81 aa12.14□□□□□ -0.47
GSDMD-216ENST00000534602 LITAFQ99732 161 aa12.14□□□□□ -0.47
GSDMD-216ENST00000534602 SPANXCQ9NY87 97 aa12.14□□□□□ -0.47
GSDMD-216ENST00000534602 HINT1P49773 126 aaPredicted RBP12.12□□□□□ -0.47
GSDMD-216ENST00000534602 KRTAP13-3Q3SY46 172 aa12.12□□□□□ -0.47
GSDMD-216ENST00000534602 LINC00308Q8TCZ7 52 aa12.12□□□□□ -0.47
GSDMD-216ENST00000534602 Q8N377 158 aa12.09□□□□□ -0.47
GSDMD-216ENST00000534602 FAT4Q6V0I7 4981 aa12.08□□□□□ -0.48
GSDMD-216ENST00000534602 SLC25A20O43772 301 aa12.08□□□□□ -0.48
GSDMD-216ENST00000534602 ZNF815PA8K554 130 aa12.07□□□□□ -0.48
GSDMD-216ENST00000534602 LCE2AQ5TA79 106 aaPredicted RBP12.07□□□□□ -0.48
GSDMD-216ENST00000534602 OR13C6PQ8NH95 151 aa12.06□□□□□ -0.48
GSDMD-216ENST00000534602 SPANXDQ9BXN6 97 aa12.06□□□□□ -0.48
GSDMD-216ENST00000534602 COA6Q5JTJ3 125 aaKnown RBP12.05□□□□□ -0.48
GSDMD-216ENST00000534602 C9orf153Q5TBE3 101 aa12.05□□□□□ -0.48
GSDMD-216ENST00000534602 ST20-AS1Q8NBB2 130 aa12.05□□□□□ -0.48
GSDMD-216ENST00000534602 C3orf79P0CE67 100 aa12.04□□□□□ -0.48
GSDMD-216ENST00000534602 LINC00518Q8N0U6 118 aa12.04□□□□□ -0.48
GSDMD-216ENST00000534602 DHRS4-AS1Q9P1J3 65 aa12.04□□□□□ -0.48
GSDMD-216ENST00000534602 SPRR1BP22528 89 aa12.03□□□□□ -0.48
GSDMD-216ENST00000534602 ASB16-AS1Q495Z4 193 aa12.02□□□□□ -0.49
GSDMD-216ENST00000534602 SLC25A34Q6PIV7 304 aa12.01□□□□□ -0.49
GSDMD-216ENST00000534602 TTTY13Q9BZ97 58 aa12.01□□□□□ -0.49
GSDMD-216ENST00000534602 KRTDAPP60985 99 aa11.99□□□□□ -0.49
GSDMD-216ENST00000534602 C20orf202A1L168 122 aa11.97□□□□□ -0.49
GSDMD-216ENST00000534602 ELOF1P60002 83 aaKnown RBP11.97□□□□□ -0.49
GSDMD-216ENST00000534602 SEC61BP60468 96 aaKnown RBP11.97□□□□□ -0.49
GSDMD-216ENST00000534602 COPS9Q8WXC6 57 aa11.97□□□□□ -0.49
GSDMD-216ENST00000534602 COX7BP24311 80 aa11.96□□□□□ -0.49
GSDMD-216ENST00000534602 C6orf99Q4VX62 202 aa11.95□□□□□ -0.5
GSDMD-216ENST00000534602 SCGB1D4Q6XE38 83 aa11.95□□□□□ -0.5
GSDMD-216ENST00000534602 LAMTOR3Q9UHA4 124 aa11.95□□□□□ -0.5
GSDMD-216ENST00000534602 TRBV7-6A0A0J9YX20 115 aa11.94□□□□□ -0.5
GSDMD-216ENST00000534602 IFITM1P13164 125 aa11.93□□□□□ -0.5
GSDMD-216ENST00000534602 AKR1D1P51857 326 aa11.93□□□□□ -0.5
GSDMD-216ENST00000534602 Q6ZVH6 145 aa11.93□□□□□ -0.5
GSDMD-216ENST00000534602 ANKRD39Q53RE8 183 aa11.91□□□□□ -0.5
GSDMD-216ENST00000534602 XP32Q5T750 250 aa11.91□□□□□ -0.5
GSDMD-216ENST00000534602 LIMD2Q9BT23 127 aa11.91□□□□□ -0.5
GSDMD-216ENST00000534602 TAL2Q16559 108 aa11.88□□□□□ -0.51
GSDMD-216ENST00000534602 TEX49A0A1B0GTD5 131 aa11.87□□□□□ -0.51
GSDMD-216ENST00000534602 A0A1B0GWB2 263 aa11.87□□□□□ -0.51
GSDMD-216ENST00000534602 CD164Q04900 197 aa11.86□□□□□ -0.51
GSDMD-216ENST00000534602 KRTAP9-2Q9BYQ4 174 aa11.86□□□□□ -0.51
GSDMD-216ENST00000534602 A6NDN8 102 aa11.85□□□□□ -0.51
GSDMD-216ENST00000534602 SNRPEP62304 92 aaKnown RBP11.85□□□□□ -0.51
GSDMD-216ENST00000534602 ATOH7Q8N100 152 aa11.85□□□□□ -0.51
GSDMD-216ENST00000534602 HRCT1Q6UXD1 115 aa11.84□□□□□ -0.51
GSDMD-216ENST00000534602 PCP2Q8IVA1 136 aa11.84□□□□□ -0.51
GSDMD-216ENST00000534602 MUSTN1Q8IVN3 82 aa11.84□□□□□ -0.51
GSDMD-216ENST00000534602 DEFB105AQ8NG35 78 aa11.84□□□□□ -0.51
GSDMD-216ENST00000534602 KRTAP4-1Q9BYQ7 146 aa11.84□□□□□ -0.51
GSDMD-216ENST00000534602 PRO1933Q9H354 126 aa11.84□□□□□ -0.51
GSDMD-216ENST00000534602 A4D1N5 150 aa11.83□□□□□ -0.52
GSDMD-216ENST00000534602 Q1RN00 199 aa11.83□□□□□ -0.52
GSDMD-216ENST00000534602 IGLV5-48A0A075B6I7 105 aa11.81□□□□□ -0.52
GSDMD-216ENST00000534602 TRAV13-2A0A0B4J235 113 aa11.8□□□□□ -0.52
GSDMD-216ENST00000534602 SMIM29Q86T20 159 aa11.8□□□□□ -0.52
GSDMD-216ENST00000534602 LINC01547P58512 204 aaPredicted RBP11.79□□□□□ -0.52
GSDMD-216ENST00000534602 H7C2G1 150 aa11.78□□□□□ -0.52
GSDMD-216ENST00000534602 Q5XG85 94 aa11.78□□□□□ -0.52
GSDMD-216ENST00000534602 NHP2Q9NX24 153 aaKnown RBP11.78□□□□□ -0.52
GSDMD-216ENST00000534602 SMIM11BQ8TCY0 68 aa11.75□□□□□ -0.53
GSDMD-216ENST00000534602 HIST3H2BBQ8N257 126 aa11.72□□□□□ -0.53
GSDMD-216ENST00000534602 HIST1H2BLQ99880 126 aa11.71□□□□□ -0.53
GSDMD-216ENST00000534602 S100A2P29034 98 aa11.7□□□□□ -0.54
GSDMD-216ENST00000534602 VAMP3Q15836 100 aa11.7□□□□□ -0.54
GSDMD-216ENST00000534602 HSBP1L1C9JCN9 74 aa11.69□□□□□ -0.54
GSDMD-216ENST00000534602 C9orf92A6NGG3 77 aa11.68□□□□□ -0.54
GSDMD-216ENST00000534602 C1orf195Q5TG92 126 aa11.67□□□□□ -0.54
GSDMD-216ENST00000534602 PCOTHQ58A44 107 aa11.65□□□□□ -0.54
GSDMD-216ENST00000534602 LINC00575Q6W349 94 aa11.65□□□□□ -0.54
GSDMD-216ENST00000534602 A0A0G2JQZ4 141 aa11.64□□□□□ -0.55
GSDMD-216ENST00000534602 F8WEM9 126 aa11.62□□□□□ -0.55
GSDMD-216ENST00000534602 IGLV8-61A0A075B6I0 122 aa11.61□□□□□ -0.55
GSDMD-216ENST00000534602 TCL1BO95988 128 aa11.61□□□□□ -0.55
GSDMD-216ENST00000534602 hADV29S1A0JD25 119 aa11.6□□□□□ -0.55
GSDMD-216ENST00000534602 S100A6P06703 90 aa11.6□□□□□ -0.55
GSDMD-216ENST00000534602 LCE2CQ5TA81 110 aa11.6□□□□□ -0.55
GSDMD-216ENST00000534602 S100A1P23297 94 aa11.58□□□□□ -0.56
GSDMD-216ENST00000534602 Q6ZQY7 126 aa11.58□□□□□ -0.56
GSDMD-216ENST00000534602 KRTAP19-2Q3LHN2 52 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 624 ms