RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
PAX6-230ENST00000534390 IGLV6-57P01721 117 aa9.34□□□□□ -0.91
PAX6-230ENST00000534390 PPDPFQ9H3Y8 114 aa9.34□□□□□ -0.91
PAX6-230ENST00000534390 SPANXCQ9NY87 97 aa9.34□□□□□ -0.91
PAX6-230ENST00000534390 B5MCH6 92 aa9.33□□□□□ -0.92
PAX6-230ENST00000534390 PRR4Q16378 134 aa9.33□□□□□ -0.92
PAX6-230ENST00000534390 PCP2Q8IVA1 136 aa9.32□□□□□ -0.92
PAX6-230ENST00000534390 C3orf22Q8N5N4 141 aa9.32□□□□□ -0.92
PAX6-230ENST00000534390 LINC00304Q8N9R0 145 aa9.32□□□□□ -0.92
PAX6-230ENST00000534390 ZNF73O43830 326 aaPredicted RBP9.31□□□□□ -0.92
PAX6-230ENST00000534390 Q6ZRX8 168 aa9.31□□□□□ -0.92
PAX6-230ENST00000534390 HSBP1L1C9JCN9 74 aa9.3□□□□□ -0.92
PAX6-230ENST00000534390 SNRPEP62304 92 aaKnown RBP9.3□□□□□ -0.92
PAX6-230ENST00000534390 GAGE2AQ6NT46 116 aa9.3□□□□□ -0.92
PAX6-230ENST00000534390 CBY1Q9Y3M2 126 aa9.3□□□□□ -0.92
PAX6-230ENST00000534390 HINT1P49773 126 aaPredicted RBP9.29□□□□□ -0.92
PAX6-230ENST00000534390 JOSD1Q15040 202 aaPredicted RBP9.29□□□□□ -0.92
PAX6-230ENST00000534390 SPANXDQ9BXN6 97 aa9.29□□□□□ -0.92
PAX6-230ENST00000534390 UBR4Q5T4S7 5183 aa9.29□□□□□ -0.92
PAX6-230ENST00000534390 ERC2-IT1O76042 136 aa9.28□□□□□ -0.92
PAX6-230ENST00000534390 COPS9Q8WXC6 57 aa9.28□□□□□ -0.92
PAX6-230ENST00000534390 Q9BRP9 147 aa9.28□□□□□ -0.92
PAX6-230ENST00000534390 LRP2P98164 4655 aa9.27□□□□□ -0.93
PAX6-230ENST00000534390 SCGB1D1O95968 90 aa9.26□□□□□ -0.93
PAX6-230ENST00000534390 LINC00518Q8N0U6 118 aa9.26□□□□□ -0.93
PAX6-230ENST00000534390 IGLV9-49A0A0B4J1Y8 123 aa9.24□□□□□ -0.93
PAX6-230ENST00000534390 IFITM1P13164 125 aa9.24□□□□□ -0.93
PAX6-230ENST00000534390 MUSTN1Q8IVN3 82 aa9.24□□□□□ -0.93
PAX6-230ENST00000534390 RETNLBQ9BQ08 111 aa9.24□□□□□ -0.93
PAX6-230ENST00000534390 A6NDN8 102 aa9.23□□□□□ -0.93
PAX6-230ENST00000534390 C4orf48Q5BLP8 95 aa9.23□□□□□ -0.93
PAX6-230ENST00000534390 Q6ZVH6 145 aa9.23□□□□□ -0.93
PAX6-230ENST00000534390 LINC00483Q53H64 154 aa9.22□□□□□ -0.93
PAX6-230ENST00000534390 Q8NBF4 154 aa9.22□□□□□ -0.93
PAX6-230ENST00000534390 C5orf52A6NGY3 159 aa9.21□□□□□ -0.94
PAX6-230ENST00000534390 MOBPQ13875 183 aa9.21□□□□□ -0.94
PAX6-230ENST00000534390 COX7BP24311 80 aa9.2□□□□□ -0.94
PAX6-230ENST00000534390 C6orf99Q4VX62 202 aa9.2□□□□□ -0.94
PAX6-230ENST00000534390 ST20-AS1Q8NBB2 130 aa9.2□□□□□ -0.94
PAX6-230ENST00000534390 C9orf153Q5TBE3 101 aa9.19□□□□□ -0.94
PAX6-230ENST00000534390 SPAG11AQ6PDA7 123 aa9.18□□□□□ -0.94
PAX6-230ENST00000534390 DHRS4-AS1Q9P1J3 65 aa9.18□□□□□ -0.94
PAX6-230ENST00000534390 LPAP08519 4548 aa9.17□□□□□ -0.94
PAX6-230ENST00000534390 ELOF1P60002 83 aaKnown RBP9.16□□□□□ -0.94
PAX6-230ENST00000534390 TRAV13-2A0A0B4J235 113 aa9.15□□□□□ -0.94
PAX6-230ENST00000534390 DEFB105AQ8NG35 78 aa9.13□□□□□ -0.95
PAX6-230ENST00000534390 HIST1H4GQ99525 98 aa9.12□□□□□ -0.95
PAX6-230ENST00000534390 PAM16Q9Y3D7 125 aa9.12□□□□□ -0.95
PAX6-230ENST00000534390 A0A1B0GWB2 263 aa9.11□□□□□ -0.95
PAX6-230ENST00000534390 A4D1N5 150 aa9.11□□□□□ -0.95
PAX6-230ENST00000534390 COX8AP10176 69 aa9.11□□□□□ -0.95
PAX6-230ENST00000534390 CTAG1AP78358 180 aa9.11□□□□□ -0.95
PAX6-230ENST00000534390 TAL2Q16559 108 aa9.11□□□□□ -0.95
PAX6-230ENST00000534390 SSBP3-AS1Q7Z2R9 100 aa9.11□□□□□ -0.95
PAX6-230ENST00000534390 IGLV7-46A0A075B6I9 117 aa9.1□□□□□ -0.95
PAX6-230ENST00000534390 TRBV7-6A0A0J9YX20 115 aa9.1□□□□□ -0.95
PAX6-230ENST00000534390 SPINK1P00995 79 aa9.1□□□□□ -0.95
PAX6-230ENST00000534390 SPATA45Q537H7 98 aa9.1□□□□□ -0.95
PAX6-230ENST00000534390 SLC25A34Q6PIV7 304 aa9.1□□□□□ -0.95
PAX6-230ENST00000534390 SMIM11BQ8TCY0 68 aa9.1□□□□□ -0.95
PAX6-230ENST00000534390 C12orf57Q99622 126 aa9.1□□□□□ -0.95
PAX6-230ENST00000534390 C14orf144Q96I85 54 aa9.09□□□□□ -0.95
PAX6-230ENST00000534390 VAMP8Q9BV40 100 aa9.09□□□□□ -0.95
PAX6-230ENST00000534390 LAMTOR3Q9UHA4 124 aa9.09□□□□□ -0.95
PAX6-230ENST00000534390 Q1RN00 199 aa9.07□□□□□ -0.96
PAX6-230ENST00000534390 SPRR1BP22528 89 aa9.06□□□□□ -0.96
PAX6-230ENST00000534390 TMA7Q9Y2S6 64 aaKnown RBP9.06□□□□□ -0.96
PAX6-230ENST00000534390 VAMP3Q15836 100 aa9.05□□□□□ -0.96
PAX6-230ENST00000534390 CDIP1Q9H305 208 aa9.05□□□□□ -0.96
PAX6-230ENST00000534390 NHP2Q9NX24 153 aaKnown RBP9.05□□□□□ -0.96
PAX6-230ENST00000534390 RNF213Q63HN8 5207 aa9.05□□□□□ -0.96
PAX6-230ENST00000534390 TEX49A0A1B0GTD5 131 aa9.04□□□□□ -0.96
PAX6-230ENST00000534390 DLEU1O43261 78 aa9.04□□□□□ -0.96
PAX6-230ENST00000534390 SLC25A20O43772 301 aa9.04□□□□□ -0.96
PAX6-230ENST00000534390 HRCT1Q6UXD1 115 aa9.04□□□□□ -0.96
PAX6-230ENST00000534390 H7C2G1 150 aa9.02□□□□□ -0.97
PAX6-230ENST00000534390 FP248Q71RG6 208 aaPredicted RBP9.02□□□□□ -0.97
PAX6-230ENST00000534390 TPRXLQ17RH7 258 aa9.01□□□□□ -0.97
PAX6-230ENST00000534390 RPS29P62273 56 aaKnown RBP9□□□□□ -0.97
PAX6-230ENST00000534390 Q8N377 158 aa9□□□□□ -0.97
PAX6-230ENST00000534390 RAB37Q96AX2 223 aa9□□□□□ -0.97
PAX6-230ENST00000534390 LINC00575Q6W349 94 aa8.98□□□□□ -0.97
PAX6-230ENST00000534390 HIGD1BQ9P298 99 aa8.98□□□□□ -0.97
PAX6-230ENST00000534390 IGLV5-48A0A075B6I7 105 aa8.97□□□□□ -0.97
PAX6-230ENST00000534390 LINC01547P58512 204 aaPredicted RBP8.97□□□□□ -0.97
PAX6-230ENST00000534390 C2orf91Q6ZV80 131 aa8.97□□□□□ -0.97
PAX6-230ENST00000534390 PRO1933Q9H354 126 aa8.97□□□□□ -0.97
PAX6-230ENST00000534390 hADV29S1A0JD25 119 aa8.96□□□□□ -0.98
PAX6-230ENST00000534390 LIMD2Q9BT23 127 aa8.96□□□□□ -0.98
PAX6-230ENST00000534390 F8WEM9 126 aa8.95□□□□□ -0.98
PAX6-230ENST00000534390 CFC1BP0CG36 223 aa8.95□□□□□ -0.98
PAX6-230ENST00000534390 CFC1P0CG37 223 aa8.95□□□□□ -0.98
PAX6-230ENST00000534390 BVES-AS1Q5T3Y7 98 aa8.95□□□□□ -0.98
PAX6-230ENST00000534390 Q6ZQY7 126 aa8.95□□□□□ -0.98
PAX6-230ENST00000534390 SMIM29Q86T20 159 aa8.95□□□□□ -0.98
PAX6-230ENST00000534390 PYY3Q5JQD4 70 aa8.94□□□□□ -0.98
PAX6-230ENST00000534390 A0A0G2JQZ4 141 aa8.92□□□□□ -0.98
PAX6-230ENST00000534390 KRTAP13-3Q3SY46 172 aa8.92□□□□□ -0.98
PAX6-230ENST00000534390 CEND1Q8N111 149 aa8.92□□□□□ -0.98
PAX6-230ENST00000534390 A0A0B4J2C4 111 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms