RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 UQCR10Q9UDW1 63 aa2.55□□□□□ -2
CASP4-213ENST00000534356 TRBV7-3A0A075B6L6 115 aa2.54□□□□□ -2
CASP4-213ENST00000534356 A0A1B0GU33 70 aa2.54□□□□□ -2
CASP4-213ENST00000534356 ZNF73O43830 326 aaPredicted RBP2.54□□□□□ -2
CASP4-213ENST00000534356 SH2D1AO60880 128 aa2.54□□□□□ -2
CASP4-213ENST00000534356 MPC2O95563 127 aa2.54□□□□□ -2
CASP4-213ENST00000534356 ARL14EPLP0DKL9 152 aa2.54□□□□□ -2
CASP4-213ENST00000534356 NDUFA6P56556 154 aa2.54□□□□□ -2
CASP4-213ENST00000534356 KHDC3LQ587J8 217 aa2.54□□□□□ -2
CASP4-213ENST00000534356 MRPL54Q6P161 138 aaKnown RBP2.54□□□□□ -2
CASP4-213ENST00000534356 PHF5AQ7RTV0 110 aaKnown RBP2.54□□□□□ -2
CASP4-213ENST00000534356 OR10AG1Q8NH19 301 aa2.54□□□□□ -2
CASP4-213ENST00000534356 VAMP8Q9BV40 100 aa2.54□□□□□ -2
CASP4-213ENST00000534356 HIGD2AQ9BW72 106 aa2.54□□□□□ -2
CASP4-213ENST00000534356 KRTAP4-1Q9BYQ7 146 aa2.54□□□□□ -2
CASP4-213ENST00000534356 IL36BQ9NZH7 164 aa2.54□□□□□ -2
CASP4-213ENST00000534356 PSORS1C2Q9UIG4 136 aa2.54□□□□□ -2
CASP4-213ENST00000534356 PHLDA3Q9Y5J5 127 aa2.54□□□□□ -2
CASP4-213ENST00000534356 PIGBOS1A0A0B4J2F0 54 aa2.53□□□□□ -2
CASP4-213ENST00000534356 TRBV6-1A0A0K0K1D8 114 aa2.53□□□□□ -2
CASP4-213ENST00000534356 DPM2O94777 84 aa2.53□□□□□ -2
CASP4-213ENST00000534356 FABP4P15090 132 aa2.53□□□□□ -2
CASP4-213ENST00000534356 RASL11AQ6T310 242 aa2.53□□□□□ -2
CASP4-213ENST00000534356 ALKAL2Q6UX46 152 aa2.53□□□□□ -2
CASP4-213ENST00000534356 EIF5A2Q9GZV4 153 aaKnown RBP2.53□□□□□ -2
CASP4-213ENST00000534356 EPDR1Q9UM22 224 aa2.53□□□□□ -2
CASP4-213ENST00000534356 ARL2-SNX15V9GYD0 113 aa2.53□□□□□ -2
CASP4-213ENST00000534356 HMSDA8MTL9 139 aa2.52□□□□□ -2.01
CASP4-213ENST00000534356 NCR2O95944 276 aa2.52□□□□□ -2.01
CASP4-213ENST00000534356 GCHFRP30047 84 aa2.52□□□□□ -2.01
CASP4-213ENST00000534356 PMAIP1Q13794 54 aa2.52□□□□□ -2.01
CASP4-213ENST00000534356 ZNF56Q15929 161 aa2.52□□□□□ -2.01
CASP4-213ENST00000534356 C1orf137Q5JT78 98 aa2.52□□□□□ -2.01
CASP4-213ENST00000534356 LYRM7Q5U5X0 104 aa2.52□□□□□ -2.01
CASP4-213ENST00000534356 Q6Q795 121 aa2.52□□□□□ -2.01
CASP4-213ENST00000534356 NUP35Q8NFH5 326 aa2.52□□□□□ -2.01
CASP4-213ENST00000534356 HIST1H2BLQ99880 126 aa2.52□□□□□ -2.01
CASP4-213ENST00000534356 RETNLBQ9BQ08 111 aa2.52□□□□□ -2.01
CASP4-213ENST00000534356 TMEM191AQ9H0A3 160 aa2.52□□□□□ -2.01
CASP4-213ENST00000534356 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.51□□□□□ -2.01
CASP4-213ENST00000534356 TRBV10-1A0A0K0K1A3 114 aa2.51□□□□□ -2.01
CASP4-213ENST00000534356 NAP1L6A6NFF2 107 aa2.51□□□□□ -2.01
CASP4-213ENST00000534356 SPINK8P0C7L1 97 aa2.51□□□□□ -2.01
CASP4-213ENST00000534356 BCL2P10415 239 aa2.51□□□□□ -2.01
CASP4-213ENST00000534356 TAS2R45P59539 299 aa2.51□□□□□ -2.01
CASP4-213ENST00000534356 MEIG1Q5JSS6 88 aa2.51□□□□□ -2.01
CASP4-213ENST00000534356 Q86TA4 180 aa2.51□□□□□ -2.01
CASP4-213ENST00000534356 KCNRGQ8N5I3 272 aa2.51□□□□□ -2.01
CASP4-213ENST00000534356 COPS9Q8WXC6 57 aa2.51□□□□□ -2.01
CASP4-213ENST00000534356 RAB37Q96AX2 223 aa2.51□□□□□ -2.01
CASP4-213ENST00000534356 IMMP2LQ96T52 175 aa2.51□□□□□ -2.01
CASP4-213ENST00000534356 PKIGQ9Y2B9 76 aa2.51□□□□□ -2.01
CASP4-213ENST00000534356 TRBV25-1A0A075B6N4 114 aa2.5□□□□□ -2.01
CASP4-213ENST00000534356 TRAV26-2A0A0B4J265 109 aa2.5□□□□□ -2.01
CASP4-213ENST00000534356 C17orf112F2Z3M2 114 aa2.5□□□□□ -2.01
CASP4-213ENST00000534356 M0QY20 66 aa2.5□□□□□ -2.01
CASP4-213ENST00000534356 LYRM1O43325 122 aa2.5□□□□□ -2.01
CASP4-213ENST00000534356 MT-ND6P03923 174 aa2.5□□□□□ -2.01
CASP4-213ENST00000534356 IFITM1P13164 125 aa2.5□□□□□ -2.01
CASP4-213ENST00000534356 TPT1P13693 172 aaKnown RBP2.5□□□□□ -2.01
CASP4-213ENST00000534356 ADIRFQ15847 76 aa2.5□□□□□ -2.01
CASP4-213ENST00000534356 C9orf116Q5BN46 136 aaPredicted RBP2.5□□□□□ -2.01
CASP4-213ENST00000534356 C20orf166-AS1Q96NR2 134 aa2.5□□□□□ -2.01
CASP4-213ENST00000534356 AQP10Q96PS8 301 aa2.5□□□□□ -2.01
CASP4-213ENST00000534356 SMDT1Q9H4I9 107 aa2.5□□□□□ -2.01
CASP4-213ENST00000534356 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.49□□□□□ -2.01
CASP4-213ENST00000534356 GVQW2A0A096LPI5 108 aaPredicted RBP2.49□□□□□ -2.01
CASP4-213ENST00000534356 IGHV1-24A0A0C4DH33 117 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 IGKV2-29A2NJV5 120 aaPredicted RBP2.49□□□□□ -2.01
CASP4-213ENST00000534356 F8W1H4 67 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 HIST1H2BKO60814 126 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 HIST1H2BJP06899 126 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 MGPP08493 103 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 HIST1H2BOP23527 126 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 HIST1H2BBP33778 126 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 XCL1P47992 114 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 HIST1H2BDP58876 126 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 HIST1H2BCP62807 126 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 HIST2H2BEQ16778 126 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.49□□□□□ -2.01
CASP4-213ENST00000534356 PPP1R1CQ8WVI7 109 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 HIST1H2BHQ93079 126 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 HIST1H2BNQ99877 126 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 HIST1H2BMQ99879 126 aa2.49□□□□□ -2.01
CASP4-213ENST00000534356 RNASE7Q9H1E1 156 aaKnown RBP2.49□□□□□ -2.01
CASP4-213ENST00000534356 FAM236DA0A1B0GTK5 79 aa2.48□□□□□ -2.01
CASP4-213ENST00000534356 KANTRA0A1W2PQU2 76 aa2.48□□□□□ -2.01
CASP4-213ENST00000534356 C7orf77A4D0Y5 90 aa2.48□□□□□ -2.01
CASP4-213ENST00000534356 SLC25A20O43772 301 aa2.48□□□□□ -2.01
CASP4-213ENST00000534356 FAM236CP0DP71 79 aa2.48□□□□□ -2.01
CASP4-213ENST00000534356 FOXA3P55318 350 aaPredicted RBP2.48□□□□□ -2.01
CASP4-213ENST00000534356 SEC11AP67812 179 aa2.48□□□□□ -2.01
CASP4-213ENST00000534356 ANKRD29Q8N6D5 301 aa2.48□□□□□ -2.01
CASP4-213ENST00000534356 CARD19Q96LW7 228 aa2.48□□□□□ -2.01
CASP4-213ENST00000534356 TRBV24-1A0A075B6N3 115 aa2.47□□□□□ -2.01
CASP4-213ENST00000534356 K7EP34 96 aa2.47□□□□□ -2.01
CASP4-213ENST00000534356 IGLC6P0CF74 106 aa2.47□□□□□ -2.01
CASP4-213ENST00000534356 ZNF22P17026 224 aaPredicted RBP2.47□□□□□ -2.01
CASP4-213ENST00000534356 TMEM258P61165 79 aa2.47□□□□□ -2.01
CASP4-213ENST00000534356 PMCHL1Q16048 86 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms