RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 KRTDAPP60985 99 aa10.94□□□□□ -0.66
LRRK1-210ENST00000534045 Q6ZRX8 168 aa10.94□□□□□ -0.66
LRRK1-210ENST00000534045 CDIP1Q9H305 208 aa10.94□□□□□ -0.66
LRRK1-210ENST00000534045 ZNF815PA8K554 130 aa10.93□□□□□ -0.66
LRRK1-210ENST00000534045 SOSTDC1Q6X4U4 206 aa10.93□□□□□ -0.66
LRRK1-210ENST00000534045 Q8NBF4 154 aa10.93□□□□□ -0.66
LRRK1-210ENST00000534045 ZNF73O43830 326 aaPredicted RBP10.92□□□□□ -0.66
LRRK1-210ENST00000534045 C3orf79P0CE67 100 aa10.92□□□□□ -0.66
LRRK1-210ENST00000534045 IGLV9-49A0A0B4J1Y8 123 aa10.91□□□□□ -0.66
LRRK1-210ENST00000534045 C20orf202A1L168 122 aa10.91□□□□□ -0.66
LRRK1-210ENST00000534045 TIMM17BO60830 172 aa10.91□□□□□ -0.66
LRRK1-210ENST00000534045 ERC2-IT1O76042 136 aa10.91□□□□□ -0.66
LRRK1-210ENST00000534045 LINC00483Q53H64 154 aa10.91□□□□□ -0.66
LRRK1-210ENST00000534045 LINC00308Q8TCZ7 52 aa10.91□□□□□ -0.66
LRRK1-210ENST00000534045 SPANXCQ9NY87 97 aa10.91□□□□□ -0.66
LRRK1-210ENST00000534045 Q9BRP9 147 aa10.9□□□□□ -0.66
LRRK1-210ENST00000534045 EIF4EBP3O60516 100 aaPredicted RBP10.89□□□□□ -0.67
LRRK1-210ENST00000534045 SPINK1P00995 79 aa10.89□□□□□ -0.67
LRRK1-210ENST00000534045 MOBPQ13875 183 aa10.88□□□□□ -0.67
LRRK1-210ENST00000534045 COA6Q5JTJ3 125 aaKnown RBP10.88□□□□□ -0.67
LRRK1-210ENST00000534045 SCGB1D4Q6XE38 83 aa10.88□□□□□ -0.67
LRRK1-210ENST00000534045 SSBP3-AS1Q7Z2R9 100 aa10.88□□□□□ -0.67
LRRK1-210ENST00000534045 TPRXLQ17RH7 258 aa10.87□□□□□ -0.67
LRRK1-210ENST00000534045 A0A0U1RQV1 116 aa10.86□□□□□ -0.67
LRRK1-210ENST00000534045 LINC00518Q8N0U6 118 aa10.86□□□□□ -0.67
LRRK1-210ENST00000534045 LITAFQ99732 161 aa10.86□□□□□ -0.67
LRRK1-210ENST00000534045 TTTY13Q9BZ97 58 aa10.85□□□□□ -0.67
LRRK1-210ENST00000534045 AKR1D1P51857 326 aa10.84□□□□□ -0.67
LRRK1-210ENST00000534045 C9orf153Q5TBE3 101 aa10.84□□□□□ -0.67
LRRK1-210ENST00000534045 FP248Q71RG6 208 aaPredicted RBP10.84□□□□□ -0.67
LRRK1-210ENST00000534045 COPS9Q8WXC6 57 aa10.84□□□□□ -0.67
LRRK1-210ENST00000534045 SPANXDQ9BXN6 97 aa10.84□□□□□ -0.67
LRRK1-210ENST00000534045 C5orf52A6NGY3 159 aa10.82□□□□□ -0.68
LRRK1-210ENST00000534045 DHRS4-AS1Q9P1J3 65 aa10.81□□□□□ -0.68
LRRK1-210ENST00000534045 ATOH7Q8N100 152 aa10.8□□□□□ -0.68
LRRK1-210ENST00000534045 SLC25A34Q6PIV7 304 aa10.79□□□□□ -0.68
LRRK1-210ENST00000534045 ST20-AS1Q8NBB2 130 aa10.79□□□□□ -0.68
LRRK1-210ENST00000534045 COX7BP24311 80 aa10.77□□□□□ -0.69
LRRK1-210ENST00000534045 ANKRD39Q53RE8 183 aa10.77□□□□□ -0.69
LRRK1-210ENST00000534045 A6NDN8 102 aa10.76□□□□□ -0.69
LRRK1-210ENST00000534045 SLC25A20O43772 301 aa10.76□□□□□ -0.69
LRRK1-210ENST00000534045 IFITM1P13164 125 aa10.76□□□□□ -0.69
LRRK1-210ENST00000534045 S100A2P29034 98 aa10.76□□□□□ -0.69
LRRK1-210ENST00000534045 RPS29P62273 56 aaKnown RBP10.76□□□□□ -0.69
LRRK1-210ENST00000534045 C6orf99Q4VX62 202 aa10.76□□□□□ -0.69
LRRK1-210ENST00000534045 Q6ZVH6 145 aa10.76□□□□□ -0.69
LRRK1-210ENST00000534045 TAL2Q16559 108 aa10.75□□□□□ -0.69
LRRK1-210ENST00000534045 LAMTOR3Q9UHA4 124 aa10.75□□□□□ -0.69
LRRK1-210ENST00000534045 SNRPEP62304 92 aaKnown RBP10.74□□□□□ -0.69
LRRK1-210ENST00000534045 MUC2Q02817 5179 aa10.72□□□□□ -0.69
LRRK1-210ENST00000534045 ELOF1P60002 83 aaKnown RBP10.72□□□□□ -0.69
LRRK1-210ENST00000534045 PCP2Q8IVA1 136 aa10.72□□□□□ -0.69
LRRK1-210ENST00000534045 MUSTN1Q8IVN3 82 aa10.72□□□□□ -0.69
LRRK1-210ENST00000534045 DEFB105AQ8NG35 78 aa10.72□□□□□ -0.69
LRRK1-210ENST00000534045 HSBP1L1C9JCN9 74 aa10.71□□□□□ -0.69
LRRK1-210ENST00000534045 Q8N377 158 aa10.71□□□□□ -0.69
LRRK1-210ENST00000534045 TRBV7-6A0A0J9YX20 115 aa10.69□□□□□ -0.7
LRRK1-210ENST00000534045 S100A6P06703 90 aa10.69□□□□□ -0.7
LRRK1-210ENST00000534045 SPRR1BP22528 89 aa10.69□□□□□ -0.7
LRRK1-210ENST00000534045 S100A1P23297 94 aa10.69□□□□□ -0.7
LRRK1-210ENST00000534045 KRTAP13-3Q3SY46 172 aa10.68□□□□□ -0.7
LRRK1-210ENST00000534045 TRAV13-2A0A0B4J235 113 aa10.67□□□□□ -0.7
LRRK1-210ENST00000534045 A0A1B0GWB2 263 aa10.67□□□□□ -0.7
LRRK1-210ENST00000534045 TEX49A0A1B0GTD5 131 aa10.66□□□□□ -0.7
LRRK1-210ENST00000534045 HRCT1Q6UXD1 115 aa10.66□□□□□ -0.7
LRRK1-210ENST00000534045 HIST3H2BBQ8N257 126 aa10.66□□□□□ -0.7
LRRK1-210ENST00000534045 LIMD2Q9BT23 127 aa10.66□□□□□ -0.7
LRRK1-210ENST00000534045 Q1RN00 199 aa10.65□□□□□ -0.7
LRRK1-210ENST00000534045 HIST1H2BLQ99880 126 aa10.65□□□□□ -0.7
LRRK1-210ENST00000534045 A4D1N5 150 aa10.64□□□□□ -0.71
LRRK1-210ENST00000534045 NHP2Q9NX24 153 aaKnown RBP10.63□□□□□ -0.71
LRRK1-210ENST00000534045 VAMP3Q15836 100 aa10.62□□□□□ -0.71
LRRK1-210ENST00000534045 PRO1933Q9H354 126 aa10.62□□□□□ -0.71
LRRK1-210ENST00000534045 SEC61BP60468 96 aaKnown RBP10.61□□□□□ -0.71
LRRK1-210ENST00000534045 SMIM11BQ8TCY0 68 aa10.59□□□□□ -0.71
LRRK1-210ENST00000534045 SCGB1D1O95968 90 aa10.58□□□□□ -0.72
LRRK1-210ENST00000534045 H7C2G1 150 aa10.57□□□□□ -0.72
LRRK1-210ENST00000534045 ASB16-AS1Q495Z4 193 aa10.57□□□□□ -0.72
LRRK1-210ENST00000534045 CD164Q04900 197 aa10.56□□□□□ -0.72
LRRK1-210ENST00000534045 MUC17Q685J3 4493 aa10.55□□□□□ -0.72
LRRK1-210ENST00000534045 IGLV5-48A0A075B6I7 105 aa10.54□□□□□ -0.72
LRRK1-210ENST00000534045 SMIM29Q86T20 159 aa10.52□□□□□ -0.73
LRRK1-210ENST00000534045 F8WEM9 126 aa10.51□□□□□ -0.73
LRRK1-210ENST00000534045 HIST1H4GQ99525 98 aa10.51□□□□□ -0.73
LRRK1-210ENST00000534045 LINC01547P58512 204 aaPredicted RBP10.5□□□□□ -0.73
LRRK1-210ENST00000534045 hADV29S1A0JD25 119 aa10.48□□□□□ -0.73
LRRK1-210ENST00000534045 XP32Q5T750 250 aa10.48□□□□□ -0.73
LRRK1-210ENST00000534045 LINC00575Q6W349 94 aa10.47□□□□□ -0.73
LRRK1-210ENST00000534045 C9orf92A6NGG3 77 aa10.46□□□□□ -0.73
LRRK1-210ENST00000534045 COX8AP10176 69 aa10.45□□□□□ -0.74
LRRK1-210ENST00000534045 C12orf57Q99622 126 aa10.45□□□□□ -0.74
LRRK1-210ENST00000534045 A0A0G2JQZ4 141 aa10.44□□□□□ -0.74
LRRK1-210ENST00000534045 Q6ZQY7 126 aa10.44□□□□□ -0.74
LRRK1-210ENST00000534045 TCL1BO95988 128 aa10.43□□□□□ -0.74
LRRK1-210ENST00000534045 BVES-AS1Q5T3Y7 98 aa10.43□□□□□ -0.74
LRRK1-210ENST00000534045 Q5XG85 94 aa10.43□□□□□ -0.74
LRRK1-210ENST00000534045 FAT4Q6V0I7 4981 aa10.43□□□□□ -0.74
LRRK1-210ENST00000534045 LCE2AQ5TA79 106 aaPredicted RBP10.42□□□□□ -0.74
LRRK1-210ENST00000534045 SNCGO76070 127 aa10.41□□□□□ -0.74
LRRK1-210ENST00000534045 DLEU1O43261 78 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms