RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 CCDC179H3BU77 68 aa3.9□□□□□ -1.79
CLNS1A-212ENST00000533957 M0R378 163 aa3.9□□□□□ -1.79
CLNS1A-212ENST00000533957 NDUFC1O43677 76 aa3.9□□□□□ -1.79
CLNS1A-212ENST00000533957 KRTAP10-3P60369 221 aa3.9□□□□□ -1.79
CLNS1A-212ENST00000533957 SPAG11BQ08648 103 aa3.9□□□□□ -1.79
CLNS1A-212ENST00000533957 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
CLNS1A-212ENST00000533957 DIRC1Q969H9 104 aa3.9□□□□□ -1.79
CLNS1A-212ENST00000533957 C11orf68Q9H3H3 251 aaKnown RBP3.9□□□□□ -1.79
CLNS1A-212ENST00000533957 C14orf132Q9NPU4 83 aa3.9□□□□□ -1.79
CLNS1A-212ENST00000533957 C6orf99Q4VX62 202 aa3.89□□□□□ -1.79
CLNS1A-212ENST00000533957 C3orf56Q8N813 242 aa3.89□□□□□ -1.79
CLNS1A-212ENST00000533957 SMCR5Q8TEV8 140 aa3.89□□□□□ -1.79
CLNS1A-212ENST00000533957 LINC00846Q9NV44 126 aa3.89□□□□□ -1.79
CLNS1A-212ENST00000533957 TRRAPQ9Y4A5 3859 aa3.89□□□□□ -1.79
CLNS1A-212ENST00000533957 A0A096LPF7 62 aa3.88□□□□□ -1.79
CLNS1A-212ENST00000533957 TLX1NBP0CAT3 122 aa3.88□□□□□ -1.79
CLNS1A-212ENST00000533957 Q6ZQT0 140 aa3.88□□□□□ -1.79
CLNS1A-212ENST00000533957 RMI2Q96E14 147 aa3.88□□□□□ -1.79
CLNS1A-212ENST00000533957 WFDC10AQ9H1F0 79 aa3.88□□□□□ -1.79
CLNS1A-212ENST00000533957 LAMTOR3Q9UHA4 124 aa3.88□□□□□ -1.79
CLNS1A-212ENST00000533957 TRAV23DV6A0A075B6W5 121 aa3.87□□□□□ -1.79
CLNS1A-212ENST00000533957 USP17L23D6RBM5 183 aa3.87□□□□□ -1.79
CLNS1A-212ENST00000533957 J3KT08 172 aa3.87□□□□□ -1.79
CLNS1A-212ENST00000533957 NCR3O14931 201 aa3.87□□□□□ -1.79
CLNS1A-212ENST00000533957 ZNF73O43830 326 aaPredicted RBP3.87□□□□□ -1.79
CLNS1A-212ENST00000533957 ERC2-IT1O76042 136 aa3.87□□□□□ -1.79
CLNS1A-212ENST00000533957 COX7BP24311 80 aa3.87□□□□□ -1.79
CLNS1A-212ENST00000533957 ELOF1P60002 83 aaKnown RBP3.87□□□□□ -1.79
CLNS1A-212ENST00000533957 DEFB135Q30KP9 77 aa3.87□□□□□ -1.79
CLNS1A-212ENST00000533957 LINC01556Q5JQF7 62 aa3.87□□□□□ -1.79
CLNS1A-212ENST00000533957 PKIGQ9Y2B9 76 aa3.87□□□□□ -1.79
CLNS1A-212ENST00000533957 DNAH3Q8TD57 4116 aa3.86□□□□□ -1.79
CLNS1A-212ENST00000533957 TRAV7A0A075B6U4 112 aa3.86□□□□□ -1.79
CLNS1A-212ENST00000533957 TRBV7-4A0A0J9YYF1 115 aa3.86□□□□□ -1.79
CLNS1A-212ENST00000533957 ATP5EP56381 51 aaPredicted RBP3.86□□□□□ -1.79
CLNS1A-212ENST00000533957 ENHOQ6UWT2 76 aa3.86□□□□□ -1.79
CLNS1A-212ENST00000533957 CAMK2N2Q96S95 79 aa3.86□□□□□ -1.79
CLNS1A-212ENST00000533957 DHRS4-AS1Q9P1J3 65 aa3.86□□□□□ -1.79
CLNS1A-212ENST00000533957 SS18L2Q9UHA2 77 aa3.86□□□□□ -1.79
CLNS1A-212ENST00000533957 KLK12Q9UKR0 248 aa3.86□□□□□ -1.79
CLNS1A-212ENST00000533957 UNQ6190/PRO20217Q6UXQ8 127 aa3.85□□□□□ -1.79
CLNS1A-212ENST00000533957 WNK1Q9H4A3 2382 aa3.85□□□□□ -1.79
CLNS1A-212ENST00000533957 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
CLNS1A-212ENST00000533957 KPRPQ5T749 579 aaPredicted RBP3.84□□□□□ -1.79
CLNS1A-212ENST00000533957 KCNQ1DNQ9H478 68 aa3.84□□□□□ -1.79
CLNS1A-212ENST00000533957 CELA1Q9UNI1 258 aa3.84□□□□□ -1.79
CLNS1A-212ENST00000533957 IGLV10-54A0A075B6I4 117 aa3.83□□□□□ -1.8
CLNS1A-212ENST00000533957 IGLV5-37A0A075B6J1 123 aa3.83□□□□□ -1.8
CLNS1A-212ENST00000533957 RPL37AP8A6NKH3 93 aa3.83□□□□□ -1.8
CLNS1A-212ENST00000533957 DNAH10OSP0CZ25 163 aa3.83□□□□□ -1.8
CLNS1A-212ENST00000533957 VPREB1P12018 145 aa3.83□□□□□ -1.8
CLNS1A-212ENST00000533957 LINC01547P58512 204 aaPredicted RBP3.83□□□□□ -1.8
CLNS1A-212ENST00000533957 KLKP1Q107X0 134 aa3.83□□□□□ -1.8
CLNS1A-212ENST00000533957 HIGD2BQ4VC39 106 aa3.83□□□□□ -1.8
CLNS1A-212ENST00000533957 Q6ZQY7 126 aa3.83□□□□□ -1.8
CLNS1A-212ENST00000533957 UPK3BQ9BT76 320 aa3.83□□□□□ -1.8
CLNS1A-212ENST00000533957 C6orf48Q9UBA6 75 aa3.83□□□□□ -1.8
CLNS1A-212ENST00000533957 PRKDCP78527 4128 aaKnown RBP3.82□□□□□ -1.8
CLNS1A-212ENST00000533957 IGLV5-48A0A075B6I7 105 aa3.82□□□□□ -1.8
CLNS1A-212ENST00000533957 IGKV3D-7A0A0C4DH55 119 aa3.82□□□□□ -1.8
CLNS1A-212ENST00000533957 KRTAP10-12P60413 245 aa3.82□□□□□ -1.8
CLNS1A-212ENST00000533957 SYCNQ0VAF6 134 aa3.82□□□□□ -1.8
CLNS1A-212ENST00000533957 CLPSL2Q6UWE3 100 aa3.82□□□□□ -1.8
CLNS1A-212ENST00000533957 FBN3Q75N90 2809 aa3.82□□□□□ -1.8
CLNS1A-212ENST00000533957 IGLV5-52A0A0A0MRZ9 124 aa3.81□□□□□ -1.8
CLNS1A-212ENST00000533957 FUSP35637 526 aaKnown RBP eCLIP3.81□□□□□ -1.8
CLNS1A-212ENST00000533957 PRR3P79522 188 aaKnown RBP3.81□□□□□ -1.8
CLNS1A-212ENST00000533957 C9orf116Q5BN46 136 aaPredicted RBP3.81□□□□□ -1.8
CLNS1A-212ENST00000533957 Q6ZVQ6 151 aa3.81□□□□□ -1.8
CLNS1A-212ENST00000533957 NKAPP1Q8N9T2 125 aa3.81□□□□□ -1.8
CLNS1A-212ENST00000533957 C11orf45Q8TAV5 145 aa3.81□□□□□ -1.8
CLNS1A-212ENST00000533957 DPH3Q96FX2 82 aa3.81□□□□□ -1.8
CLNS1A-212ENST00000533957 VWFP04275 2813 aa3.8□□□□□ -1.8
CLNS1A-212ENST00000533957 TRAV10A0A0B4J240 114 aa3.8□□□□□ -1.8
CLNS1A-212ENST00000533957 HAMPP81172 84 aa3.8□□□□□ -1.8
CLNS1A-212ENST00000533957 NREPQ16612 68 aa3.8□□□□□ -1.8
CLNS1A-212ENST00000533957 C9orf129Q5T035 196 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-212ENST00000533957 KRTAP26-1Q6PEX3 210 aa3.8□□□□□ -1.8
CLNS1A-212ENST00000533957 MRAPQ8TCY5 172 aa3.8□□□□□ -1.8
CLNS1A-212ENST00000533957 DNAH9Q9NYC9 4486 aa3.79□□□□□ -1.8
CLNS1A-212ENST00000533957 DEFB131BA0A096LNP1 70 aa3.79□□□□□ -1.8
CLNS1A-212ENST00000533957 HTN3P15516 51 aa3.79□□□□□ -1.8
CLNS1A-212ENST00000533957 ESRGQ1W209 222 aa3.79□□□□□ -1.8
CLNS1A-212ENST00000533957 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
CLNS1A-212ENST00000533957 PKD1L1Q8TDX9 2849 aa3.79□□□□□ -1.8
CLNS1A-212ENST00000533957 NBEAL1Q6ZS30 2694 aa3.78□□□□□ -1.8
CLNS1A-212ENST00000533957 MGAM2Q2M2H8 2515 aa3.78□□□□□ -1.8
CLNS1A-212ENST00000533957 SPRR1AP35321 89 aa3.78□□□□□ -1.8
CLNS1A-212ENST00000533957 C14orf177Q52M58 125 aa3.78□□□□□ -1.8
CLNS1A-212ENST00000533957 SERP1Q9Y6X1 66 aa3.78□□□□□ -1.8
CLNS1A-212ENST00000533957 IGKV2D-24A0A075B6R9 120 aa3.77□□□□□ -1.81
CLNS1A-212ENST00000533957 DEFB4AO15263 64 aa3.77□□□□□ -1.81
CLNS1A-212ENST00000533957 C5orf47Q569G3 176 aa3.77□□□□□ -1.81
CLNS1A-212ENST00000533957 Q6ZRU5 148 aa3.77□□□□□ -1.81
CLNS1A-212ENST00000533957 Q6ZRX8 168 aa3.77□□□□□ -1.81
CLNS1A-212ENST00000533957 C15orf56Q8N910 161 aa3.77□□□□□ -1.81
CLNS1A-212ENST00000533957 SPRR4Q96PI1 79 aa3.77□□□□□ -1.81
CLNS1A-212ENST00000533957 XAGE1AQ9HD64 81 aa3.77□□□□□ -1.81
CLNS1A-212ENST00000533957 IGLV1-50A0A075B6I6 118 aa3.76□□□□□ -1.81
CLNS1A-212ENST00000533957 A0A087WVE0 104 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms