RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 A0A087X002 238 aa7.94□□□□□ -1.14
CAPN1-227ENST00000533909 EIF4EBP3O60516 100 aaPredicted RBP7.94□□□□□ -1.14
CAPN1-227ENST00000533909 SPRR1AP35321 89 aa7.94□□□□□ -1.14
CAPN1-227ENST00000533909 HINT1P49773 126 aaPredicted RBP7.93□□□□□ -1.14
CAPN1-227ENST00000533909 PCP2Q8IVA1 136 aa7.93□□□□□ -1.14
CAPN1-227ENST00000533909 LINC00518Q8N0U6 118 aa7.93□□□□□ -1.14
CAPN1-227ENST00000533909 B5MCH6 92 aa7.92□□□□□ -1.14
CAPN1-227ENST00000533909 ZNF73O43830 326 aaPredicted RBP7.92□□□□□ -1.14
CAPN1-227ENST00000533909 JOSD1Q15040 202 aaPredicted RBP7.92□□□□□ -1.14
CAPN1-227ENST00000533909 SMCR5Q8TEV8 140 aa7.92□□□□□ -1.14
CAPN1-227ENST00000533909 SPANXDQ9BXN6 97 aa7.92□□□□□ -1.14
CAPN1-227ENST00000533909 KRTAP4-16G5E9R7 235 aaPredicted RBP7.91□□□□□ -1.14
CAPN1-227ENST00000533909 IFITM1P13164 125 aa7.91□□□□□ -1.14
CAPN1-227ENST00000533909 Q6ZVH6 145 aa7.91□□□□□ -1.14
CAPN1-227ENST00000533909 SPRR4Q96PI1 79 aa7.91□□□□□ -1.14
CAPN1-227ENST00000533909 C5orf52A6NGY3 159 aa7.9□□□□□ -1.14
CAPN1-227ENST00000533909 Q6ZRX8 168 aa7.9□□□□□ -1.14
CAPN1-227ENST00000533909 TSPAN13O95857 204 aa7.89□□□□□ -1.15
CAPN1-227ENST00000533909 KRTAP13-2Q52LG2 175 aa7.88□□□□□ -1.15
CAPN1-227ENST00000533909 PPDPFQ9H3Y8 114 aa7.88□□□□□ -1.15
CAPN1-227ENST00000533909 A6NDN8 102 aa7.87□□□□□ -1.15
CAPN1-227ENST00000533909 GAGE2AQ6NT46 116 aa7.87□□□□□ -1.15
CAPN1-227ENST00000533909 MUSTN1Q8IVN3 82 aa7.87□□□□□ -1.15
CAPN1-227ENST00000533909 LINC00304Q8N9R0 145 aa7.87□□□□□ -1.15
CAPN1-227ENST00000533909 Q9BRP9 147 aa7.85□□□□□ -1.15
CAPN1-227ENST00000533909 ERC2-IT1O76042 136 aa7.84□□□□□ -1.15
CAPN1-227ENST00000533909 PRR4Q16378 134 aa7.84□□□□□ -1.15
CAPN1-227ENST00000533909 C4orf48Q5BLP8 95 aa7.84□□□□□ -1.15
CAPN1-227ENST00000533909 C3orf22Q8N5N4 141 aa7.84□□□□□ -1.15
CAPN1-227ENST00000533909 TRAV13-2A0A0B4J235 113 aa7.83□□□□□ -1.16
CAPN1-227ENST00000533909 COX7BP24311 80 aa7.83□□□□□ -1.16
CAPN1-227ENST00000533909 DHRS4-AS1Q9P1J3 65 aa7.83□□□□□ -1.16
CAPN1-227ENST00000533909 C6orf99Q4VX62 202 aa7.82□□□□□ -1.16
CAPN1-227ENST00000533909 IGLV9-49A0A0B4J1Y8 123 aa7.81□□□□□ -1.16
CAPN1-227ENST00000533909 LINC00483Q53H64 154 aa7.81□□□□□ -1.16
CAPN1-227ENST00000533909 COX8AP10176 69 aa7.8□□□□□ -1.16
CAPN1-227ENST00000533909 HIST1H4GQ99525 98 aa7.8□□□□□ -1.16
CAPN1-227ENST00000533909 VAMP8Q9BV40 100 aa7.8□□□□□ -1.16
CAPN1-227ENST00000533909 ELOF1P60002 83 aaKnown RBP7.79□□□□□ -1.16
CAPN1-227ENST00000533909 SPAG11AQ6PDA7 123 aa7.79□□□□□ -1.16
CAPN1-227ENST00000533909 Q8NBF4 154 aa7.79□□□□□ -1.16
CAPN1-227ENST00000533909 PAM16Q9Y3D7 125 aa7.79□□□□□ -1.16
CAPN1-227ENST00000533909 UBR4Q5T4S7 5183 aa7.78□□□□□ -1.16
CAPN1-227ENST00000533909 TRBV7-6A0A0J9YX20 115 aa7.78□□□□□ -1.16
CAPN1-227ENST00000533909 MOBPQ13875 183 aa7.78□□□□□ -1.16
CAPN1-227ENST00000533909 SPATA45Q537H7 98 aa7.78□□□□□ -1.16
CAPN1-227ENST00000533909 C9orf153Q5TBE3 101 aa7.78□□□□□ -1.16
CAPN1-227ENST00000533909 ST20-AS1Q8NBB2 130 aa7.78□□□□□ -1.16
CAPN1-227ENST00000533909 TMA7Q9Y2S6 64 aaKnown RBP7.78□□□□□ -1.16
CAPN1-227ENST00000533909 A0A1B0GWB2 263 aa7.77□□□□□ -1.17
CAPN1-227ENST00000533909 SLC25A34Q6PIV7 304 aa7.77□□□□□ -1.17
CAPN1-227ENST00000533909 C14orf144Q96I85 54 aa7.77□□□□□ -1.17
CAPN1-227ENST00000533909 A4D1N5 150 aa7.76□□□□□ -1.17
CAPN1-227ENST00000533909 DLEU1O43261 78 aa7.76□□□□□ -1.17
CAPN1-227ENST00000533909 CTAG1AP78358 180 aa7.76□□□□□ -1.17
CAPN1-227ENST00000533909 VAMP3Q15836 100 aa7.76□□□□□ -1.17
CAPN1-227ENST00000533909 LRP2P98164 4655 aa7.75□□□□□ -1.17
CAPN1-227ENST00000533909 TAL2Q16559 108 aa7.75□□□□□ -1.17
CAPN1-227ENST00000533909 NHP2Q9NX24 153 aaKnown RBP7.75□□□□□ -1.17
CAPN1-227ENST00000533909 SSBP3-AS1Q7Z2R9 100 aa7.74□□□□□ -1.17
CAPN1-227ENST00000533909 DEFB105AQ8NG35 78 aa7.74□□□□□ -1.17
CAPN1-227ENST00000533909 SMIM11BQ8TCY0 68 aa7.74□□□□□ -1.17
CAPN1-227ENST00000533909 RETNLBQ9BQ08 111 aa7.74□□□□□ -1.17
CAPN1-227ENST00000533909 SLC25A20O43772 301 aa7.73□□□□□ -1.17
CAPN1-227ENST00000533909 C12orf57Q99622 126 aa7.73□□□□□ -1.17
CAPN1-227ENST00000533909 LAMTOR3Q9UHA4 124 aa7.73□□□□□ -1.17
CAPN1-227ENST00000533909 SPINK1P00995 79 aa7.72□□□□□ -1.17
CAPN1-227ENST00000533909 TEX49A0A1B0GTD5 131 aa7.7□□□□□ -1.18
CAPN1-227ENST00000533909 SPRR1BP22528 89 aa7.7□□□□□ -1.18
CAPN1-227ENST00000533909 RAB37Q96AX2 223 aa7.7□□□□□ -1.18
CAPN1-227ENST00000533909 HIGD1BQ9P298 99 aa7.7□□□□□ -1.18
CAPN1-227ENST00000533909 H7C2G1 150 aa7.68□□□□□ -1.18
CAPN1-227ENST00000533909 Q1RN00 199 aa7.68□□□□□ -1.18
CAPN1-227ENST00000533909 IGLV7-46A0A075B6I9 117 aa7.67□□□□□ -1.18
CAPN1-227ENST00000533909 TMEM238LA0A1B0GVL6 79 aa7.66□□□□□ -1.18
CAPN1-227ENST00000533909 A6NJY4 79 aa7.66□□□□□ -1.18
CAPN1-227ENST00000533909 PYY3Q5JQD4 70 aa7.66□□□□□ -1.18
CAPN1-227ENST00000533909 BVES-AS1Q5T3Y7 98 aa7.66□□□□□ -1.18
CAPN1-227ENST00000533909 C2orf91Q6ZV80 131 aa7.65□□□□□ -1.18
CAPN1-227ENST00000533909 hADV29S1A0JD25 119 aa7.64□□□□□ -1.19
CAPN1-227ENST00000533909 RPS29P62273 56 aaKnown RBP7.64□□□□□ -1.19
CAPN1-227ENST00000533909 LINC00575Q6W349 94 aa7.64□□□□□ -1.19
CAPN1-227ENST00000533909 FP248Q71RG6 208 aaPredicted RBP7.64□□□□□ -1.19
CAPN1-227ENST00000533909 IGLV5-48A0A075B6I7 105 aa7.63□□□□□ -1.19
CAPN1-227ENST00000533909 F8WEM9 126 aa7.63□□□□□ -1.19
CAPN1-227ENST00000533909 SNCGO76070 127 aa7.63□□□□□ -1.19
CAPN1-227ENST00000533909 CFC1BP0CG36 223 aa7.63□□□□□ -1.19
CAPN1-227ENST00000533909 CFC1P0CG37 223 aa7.63□□□□□ -1.19
CAPN1-227ENST00000533909 HRCT1Q6UXD1 115 aa7.63□□□□□ -1.19
CAPN1-227ENST00000533909 CEND1Q8N111 149 aa7.63□□□□□ -1.19
CAPN1-227ENST00000533909 CDIP1Q9H305 208 aa7.63□□□□□ -1.19
CAPN1-227ENST00000533909 PRO1933Q9H354 126 aa7.63□□□□□ -1.19
CAPN1-227ENST00000533909 A0A0B4J2C4 111 aa7.62□□□□□ -1.19
CAPN1-227ENST00000533909 LIMD2Q9BT23 127 aa7.62□□□□□ -1.19
CAPN1-227ENST00000533909 LPAP08519 4548 aa7.62□□□□□ -1.19
CAPN1-227ENST00000533909 Q6ZQY7 126 aa7.61□□□□□ -1.19
CAPN1-227ENST00000533909 LINC01547P58512 204 aaPredicted RBP7.6□□□□□ -1.19
CAPN1-227ENST00000533909 TPRXLQ17RH7 258 aa7.6□□□□□ -1.19
CAPN1-227ENST00000533909 Q8N377 158 aa7.6□□□□□ -1.19
CAPN1-227ENST00000533909 HSD52Q0P140 79 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms