RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 HYDINQ4G0P3 5121 aa4.61□□□□□ -1.67
RNPC3-209ENST00000533834 TMEM256-PLSCR3K7ERE1 68 aa4.61□□□□□ -1.67
RNPC3-209ENST00000533834 SERTAD4-AS1Q5TG53 156 aa4.61□□□□□ -1.67
RNPC3-209ENST00000533834 FAM236AA0A1B0GUQ0 79 aa4.6□□□□□ -1.67
RNPC3-209ENST00000533834 FAM236BA0A1B0GV22 79 aa4.6□□□□□ -1.67
RNPC3-209ENST00000533834 NDUFC2-KCTD14E9PQ53 114 aa4.6□□□□□ -1.67
RNPC3-209ENST00000533834 C3orf56Q8N813 242 aa4.6□□□□□ -1.67
RNPC3-209ENST00000533834 ZNF561-AS1K7EIQ3 104 aa4.6□□□□□ -1.67
RNPC3-209ENST00000533834 CRYGAP11844 174 aa4.6□□□□□ -1.67
RNPC3-209ENST00000533834 NBEAL1Q6ZS30 2694 aa4.6□□□□□ -1.67
RNPC3-209ENST00000533834 LINC00588Q9Y4M8 146 aa4.6□□□□□ -1.67
RNPC3-209ENST00000533834 TRAV23DV6A0A075B6W5 121 aa4.59□□□□□ -1.67
RNPC3-209ENST00000533834 JMJD7-PLA2G4BH0Y9G9 81 aa4.59□□□□□ -1.67
RNPC3-209ENST00000533834 EPM2AB3EWF7 344 aa4.59□□□□□ -1.67
RNPC3-209ENST00000533834 GAGE2AQ6NT46 116 aa4.59□□□□□ -1.67
RNPC3-209ENST00000533834 KRTAP17-1Q9BYP8 105 aa4.59□□□□□ -1.67
RNPC3-209ENST00000533834 KRTAP1-5Q9BYS1 174 aa4.59□□□□□ -1.67
RNPC3-209ENST00000533834 hADV29S1A0JD25 119 aa4.59□□□□□ -1.68
RNPC3-209ENST00000533834 Q9BRP9 147 aa4.59□□□□□ -1.68
RNPC3-209ENST00000533834 RPL18AQ02543 176 aaKnown RBP4.58□□□□□ -1.68
RNPC3-209ENST00000533834 K7EIL1 84 aa4.58□□□□□ -1.68
RNPC3-209ENST00000533834 ZNF73O43830 326 aaPredicted RBP4.58□□□□□ -1.68
RNPC3-209ENST00000533834 CFAP161Q6P656 301 aa4.58□□□□□ -1.68
RNPC3-209ENST00000533834 A0A087WVE0 104 aa4.58□□□□□ -1.68
RNPC3-209ENST00000533834 B5MCH6 92 aa4.58□□□□□ -1.68
RNPC3-209ENST00000533834 C3orf22Q8N5N4 141 aa4.58□□□□□ -1.68
RNPC3-209ENST00000533834 IGLV5-48A0A075B6I7 105 aa4.57□□□□□ -1.68
RNPC3-209ENST00000533834 XAGE1AQ9HD64 81 aa4.57□□□□□ -1.68
RNPC3-209ENST00000533834 COX7CP15954 63 aa4.57□□□□□ -1.68
RNPC3-209ENST00000533834 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.57□□□□□ -1.68
RNPC3-209ENST00000533834 MEGF8Q7Z7M0 2845 aa4.56□□□□□ -1.68
RNPC3-209ENST00000533834 M0R378 163 aa4.56□□□□□ -1.68
RNPC3-209ENST00000533834 HIGD2BQ4VC39 106 aa4.56□□□□□ -1.68
RNPC3-209ENST00000533834 TENM2Q9NT68 2774 aa4.56□□□□□ -1.68
RNPC3-209ENST00000533834 Q8N377 158 aa4.56□□□□□ -1.68
RNPC3-209ENST00000533834 SS18L2Q9UHA2 77 aa4.56□□□□□ -1.68
RNPC3-209ENST00000533834 IGLV1-50A0A075B6I6 118 aa4.56□□□□□ -1.68
RNPC3-209ENST00000533834 ATP5EP2Q5VTU8 51 aa4.56□□□□□ -1.68
RNPC3-209ENST00000533834 STAB1Q9NY15 2570 aa4.55□□□□□ -1.68
RNPC3-209ENST00000533834 UQCRQO14949 82 aa4.55□□□□□ -1.68
RNPC3-209ENST00000533834 DNAL4O96015 105 aa4.55□□□□□ -1.68
RNPC3-209ENST00000533834 Q6ZQY7 126 aa4.55□□□□□ -1.68
RNPC3-209ENST00000533834 OR13C6PQ8NH95 151 aa4.55□□□□□ -1.68
RNPC3-209ENST00000533834 OXTP01178 125 aa4.55□□□□□ -1.68
RNPC3-209ENST00000533834 FAM168BA1KXE4 195 aa4.54□□□□□ -1.68
RNPC3-209ENST00000533834 SMIM29Q86T20 159 aa4.54□□□□□ -1.68
RNPC3-209ENST00000533834 DEFB131BA0A096LNP1 70 aa4.54□□□□□ -1.68
RNPC3-209ENST00000533834 Q6ZVQ6 151 aa4.54□□□□□ -1.68
RNPC3-209ENST00000533834 FAM19A1Q7Z5A9 133 aa4.54□□□□□ -1.68
RNPC3-209ENST00000533834 KRTAP11-1Q8IUC1 163 aa4.54□□□□□ -1.68
RNPC3-209ENST00000533834 C7orf33Q8WU49 177 aa4.54□□□□□ -1.68
RNPC3-209ENST00000533834 CXCL6P80162 114 aa4.53□□□□□ -1.68
RNPC3-209ENST00000533834 DIRC1Q969H9 104 aa4.53□□□□□ -1.68
RNPC3-209ENST00000533834 H3BQ85 93 aa4.53□□□□□ -1.68
RNPC3-209ENST00000533834 BCE1O60756 84 aa4.53□□□□□ -1.68
RNPC3-209ENST00000533834 HTN3P15516 51 aa4.53□□□□□ -1.68
RNPC3-209ENST00000533834 SRRM2Q9UQ35 2752 aaKnown RBP4.53□□□□□ -1.68
RNPC3-209ENST00000533834 IGKV3D-7A0A0C4DH55 119 aa4.53□□□□□ -1.68
RNPC3-209ENST00000533834 C11orf45Q8TAV5 145 aa4.53□□□□□ -1.68
RNPC3-209ENST00000533834 LCE6AA0A183 80 aa4.52□□□□□ -1.69
RNPC3-209ENST00000533834 Q6ZRN7 208 aaPredicted RBP4.52□□□□□ -1.69
RNPC3-209ENST00000533834 COX7BP24311 80 aa4.52□□□□□ -1.69
RNPC3-209ENST00000533834 USP17L23D6RBM5 183 aa4.52□□□□□ -1.69
RNPC3-209ENST00000533834 CAMK2N2Q96S95 79 aa4.52□□□□□ -1.69
RNPC3-209ENST00000533834 ATOX1O00244 68 aa4.51□□□□□ -1.69
RNPC3-209ENST00000533834 CNBPP62633 177 aaKnown RBP4.51□□□□□ -1.69
RNPC3-209ENST00000533834 RBM3P98179 157 aaKnown RBP4.51□□□□□ -1.69
RNPC3-209ENST00000533834 Q6ZRX8 168 aa4.51□□□□□ -1.69
RNPC3-209ENST00000533834 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
RNPC3-209ENST00000533834 SYCNQ0VAF6 134 aa4.51□□□□□ -1.69
RNPC3-209ENST00000533834 SERP2Q8N6R1 65 aa4.51□□□□□ -1.69
RNPC3-209ENST00000533834 SPRR4Q96PI1 79 aa4.51□□□□□ -1.69
RNPC3-209ENST00000533834 S100A7L2Q5SY68 101 aa4.5□□□□□ -1.69
RNPC3-209ENST00000533834 ERC2-IT1O76042 136 aa4.5□□□□□ -1.69
RNPC3-209ENST00000533834 IGKV4-1P06312 121 aa4.5□□□□□ -1.69
RNPC3-209ENST00000533834 VPS13BQ7Z7G8 4022 aa4.5□□□□□ -1.69
RNPC3-209ENST00000533834 PKHD1L1Q86WI1 4243 aa4.5□□□□□ -1.69
RNPC3-209ENST00000533834 TRAV10A0A0B4J240 114 aa4.5□□□□□ -1.69
RNPC3-209ENST00000533834 A0A1W2PNM2 257 aa4.5□□□□□ -1.69
RNPC3-209ENST00000533834 LRCOL1A6NCL2 159 aa4.5□□□□□ -1.69
RNPC3-209ENST00000533834 KRTAP13-1Q8IUC0 172 aa4.5□□□□□ -1.69
RNPC3-209ENST00000533834 APLNQ9ULZ1 77 aa4.5□□□□□ -1.69
RNPC3-209ENST00000533834 IGLV8-61A0A075B6I0 122 aa4.49□□□□□ -1.69
RNPC3-209ENST00000533834 MRAPQ8TCY5 172 aa4.49□□□□□ -1.69
RNPC3-209ENST00000533834 LRP1BQ9NZR2 4599 aa4.49□□□□□ -1.69
RNPC3-209ENST00000533834 SACSQ9NZJ4 4579 aa4.49□□□□□ -1.69
RNPC3-209ENST00000533834 PRYO14603 147 aa4.49□□□□□ -1.69
RNPC3-209ENST00000533834 PDE6GP18545 87 aa4.49□□□□□ -1.69
RNPC3-209ENST00000533834 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
RNPC3-209ENST00000533834 C1orf43Q9BWL3 253 aa4.48□□□□□ -1.69
RNPC3-209ENST00000533834 RPS28P62857 69 aaKnown RBP4.47□□□□□ -1.69
RNPC3-209ENST00000533834 KLKP1Q107X0 134 aa4.47□□□□□ -1.69
RNPC3-209ENST00000533834 A0A1W2PNN7 141 aa4.46□□□□□ -1.7
RNPC3-209ENST00000533834 H7BZZ5 65 aa4.46□□□□□ -1.7
RNPC3-209ENST00000533834 ST20-AS1Q8NBB2 130 aa4.46□□□□□ -1.7
RNPC3-209ENST00000533834 OCR1Q9BZK8 76 aa4.46□□□□□ -1.7
RNPC3-209ENST00000533834 PRB2P02812 416 aaPredicted RBP4.45□□□□□ -1.7
RNPC3-209ENST00000533834 IGKV2D-24A0A075B6R9 120 aa4.45□□□□□ -1.7
RNPC3-209ENST00000533834 A0A1B0GW54 56 aa4.45□□□□□ -1.7
RNPC3-209ENST00000533834 SPRR1BP22528 89 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms