RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 LINC00528Q8N1L1 170 aa12.57□□□□□ -0.4
UBXN1-215ENST00000533476 PLA2G2DQ9UNK4 145 aa12.56□□□□□ -0.4
UBXN1-215ENST00000533476 HUWE1Q7Z6Z7 4374 aaKnown RBP12.56□□□□□ -0.4
UBXN1-215ENST00000533476 NKAPP1Q8N9T2 125 aa12.56□□□□□ -0.4
UBXN1-215ENST00000533476 DSCR8Q96T75 97 aa12.56□□□□□ -0.4
UBXN1-215ENST00000533476 SERTAD4-AS1Q5TG53 156 aa12.55□□□□□ -0.4
UBXN1-215ENST00000533476 KCNQ1DNQ9H478 68 aa12.54□□□□□ -0.4
UBXN1-215ENST00000533476 C7orf33Q8WU49 177 aa12.53□□□□□ -0.4
UBXN1-215ENST00000533476 IGLV5-37A0A075B6J1 123 aa12.51□□□□□ -0.41
UBXN1-215ENST00000533476 SMIM20Q8N5G0 67 aa12.5□□□□□ -0.41
UBXN1-215ENST00000533476 TRBV7-4A0A0J9YYF1 115 aa12.49□□□□□ -0.41
UBXN1-215ENST00000533476 BCE1O60756 84 aa12.49□□□□□ -0.41
UBXN1-215ENST00000533476 MEGF8Q7Z7M0 2845 aa12.49□□□□□ -0.41
UBXN1-215ENST00000533476 DNAH1Q9P2D7 4330 aa12.48□□□□□ -0.41
UBXN1-215ENST00000533476 FAM19A1Q7Z5A9 133 aa12.47□□□□□ -0.41
UBXN1-215ENST00000533476 Q6ZVQ6 151 aa12.46□□□□□ -0.42
UBXN1-215ENST00000533476 M0R2N4 97 aa12.45□□□□□ -0.42
UBXN1-215ENST00000533476 LOC107984640A0A0U1RRK4 108 aa12.45□□□□□ -0.42
UBXN1-215ENST00000533476 FAM168BA1KXE4 195 aa12.45□□□□□ -0.42
UBXN1-215ENST00000533476 PRYO14603 147 aa12.45□□□□□ -0.42
UBXN1-215ENST00000533476 CXCL6P80162 114 aa12.45□□□□□ -0.42
UBXN1-215ENST00000533476 LINC01547P58512 204 aaPredicted RBP12.44□□□□□ -0.42
UBXN1-215ENST00000533476 SVIPQ8NHG7 77 aa12.43□□□□□ -0.42
UBXN1-215ENST00000533476 IGLV1-50A0A075B6I6 118 aa12.43□□□□□ -0.42
UBXN1-215ENST00000533476 KRTAP1-5Q9BYS1 174 aa12.43□□□□□ -0.42
UBXN1-215ENST00000533476 KRTAP7-1Q8IUC3 87 aa12.42□□□□□ -0.42
UBXN1-215ENST00000533476 KRTAP4-16G5E9R7 235 aaPredicted RBP12.41□□□□□ -0.42
UBXN1-215ENST00000533476 SPRR1AP35321 89 aa12.41□□□□□ -0.42
UBXN1-215ENST00000533476 APLNQ9ULZ1 77 aa12.41□□□□□ -0.42
UBXN1-215ENST00000533476 PRKDCP78527 4128 aaKnown RBP12.4□□□□□ -0.42
UBXN1-215ENST00000533476 RPL37AP8A6NKH3 93 aa12.4□□□□□ -0.42
UBXN1-215ENST00000533476 TMEM258P61165 79 aa12.4□□□□□ -0.42
UBXN1-215ENST00000533476 Q6ZRX8 168 aa12.4□□□□□ -0.42
UBXN1-215ENST00000533476 B9D2Q9BPU9 175 aa12.4□□□□□ -0.42
UBXN1-215ENST00000533476 DHRS4-AS1Q9P1J3 65 aa12.4□□□□□ -0.42
UBXN1-215ENST00000533476 FBN3Q75N90 2809 aa12.38□□□□□ -0.43
UBXN1-215ENST00000533476 HAMPP81172 84 aa12.38□□□□□ -0.43
UBXN1-215ENST00000533476 UBE2DNLQ8IWF7 75 aa12.38□□□□□ -0.43
UBXN1-215ENST00000533476 RPS28P62857 69 aaKnown RBP12.37□□□□□ -0.43
UBXN1-215ENST00000533476 FAM19A5Q7Z5A7 132 aaPredicted RBP12.37□□□□□ -0.43
UBXN1-215ENST00000533476 MRPL55Q7Z7F7 128 aaKnown RBP12.37□□□□□ -0.43
UBXN1-215ENST00000533476 STAB2Q8WWQ8 2551 aa12.37□□□□□ -0.43
UBXN1-215ENST00000533476 CYSTM1Q9H1C7 97 aa12.37□□□□□ -0.43
UBXN1-215ENST00000533476 ETDCA0A1B0GVM5 59 aa12.36□□□□□ -0.43
UBXN1-215ENST00000533476 CNBPP62633 177 aaKnown RBP12.35□□□□□ -0.43
UBXN1-215ENST00000533476 Q9BRP9 147 aa12.35□□□□□ -0.43
UBXN1-215ENST00000533476 TRAV7A0A075B6U4 112 aa12.34□□□□□ -0.43
UBXN1-215ENST00000533476 J3KT08 172 aa12.34□□□□□ -0.43
UBXN1-215ENST00000533476 Q8N377 158 aa12.34□□□□□ -0.43
UBXN1-215ENST00000533476 COL7A1Q02388 2944 aa12.34□□□□□ -0.43
UBXN1-215ENST00000533476 PSCAO43653 123 aa12.33□□□□□ -0.44
UBXN1-215ENST00000533476 DEFB105AQ8NG35 78 aa12.31□□□□□ -0.44
UBXN1-215ENST00000533476 DNAH9Q9NYC9 4486 aa12.31□□□□□ -0.44
UBXN1-215ENST00000533476 C16orf90A8MZG2 172 aa12.3□□□□□ -0.44
UBXN1-215ENST00000533476 A0A096LNI7 61 aa12.29□□□□□ -0.44
UBXN1-215ENST00000533476 IGLV5-48A0A075B6I7 105 aa12.29□□□□□ -0.44
UBXN1-215ENST00000533476 C14orf177Q52M58 125 aa12.29□□□□□ -0.44
UBXN1-215ENST00000533476 TGP01266 2768 aa12.28□□□□□ -0.44
UBXN1-215ENST00000533476 DYNC2H1Q8NCM8 4307 aaKnown RBP12.28□□□□□ -0.44
UBXN1-215ENST00000533476 REG3GQ6UW15 175 aa12.27□□□□□ -0.44
UBXN1-215ENST00000533476 A0A1B0GW54 56 aa12.26□□□□□ -0.45
UBXN1-215ENST00000533476 DPH3Q96FX2 82 aa12.25□□□□□ -0.45
UBXN1-215ENST00000533476 NUPR2A6NF83 97 aa12.25□□□□□ -0.45
UBXN1-215ENST00000533476 ST20-AS1Q8NBB2 130 aa12.24□□□□□ -0.45
UBXN1-215ENST00000533476 IGKV2-24A0A0C4DH68 120 aa12.23□□□□□ -0.45
UBXN1-215ENST00000533476 UBE2BP63146 152 aa12.23□□□□□ -0.45
UBXN1-215ENST00000533476 TNP2Q05952 138 aa12.23□□□□□ -0.45
UBXN1-215ENST00000533476 C20orf197Q8N268 126 aa12.23□□□□□ -0.45
UBXN1-215ENST00000533476 ERC2-IT1O76042 136 aa12.22□□□□□ -0.45
UBXN1-215ENST00000533476 A0A1W2PNN7 141 aa12.21□□□□□ -0.45
UBXN1-215ENST00000533476 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.21□□□□□ -0.46
UBXN1-215ENST00000533476 NREPQ16612 68 aa12.21□□□□□ -0.46
UBXN1-215ENST00000533476 LYSTQ99698 3801 aa12.2□□□□□ -0.46
UBXN1-215ENST00000533476 NBDYA0A0U1RRE5 68 aa12.2□□□□□ -0.46
UBXN1-215ENST00000533476 KLKP1Q107X0 134 aa12.2□□□□□ -0.46
UBXN1-215ENST00000533476 SCXQ7RTU7 201 aa12.19□□□□□ -0.46
UBXN1-215ENST00000533476 LRCOL1A6NCL2 159 aa12.17□□□□□ -0.46
UBXN1-215ENST00000533476 DNAH10Q8IVF4 4471 aa12.17□□□□□ -0.46
UBXN1-215ENST00000533476 FUSP35637 526 aaKnown RBP eCLIP12.17□□□□□ -0.46
UBXN1-215ENST00000533476 C1orf137Q5JT78 98 aa12.16□□□□□ -0.46
UBXN1-215ENST00000533476 PKIGQ9Y2B9 76 aa12.16□□□□□ -0.46
UBXN1-215ENST00000533476 C3orf84H3BNL1 204 aa12.15□□□□□ -0.46
UBXN1-215ENST00000533476 IGKV4-1P06312 121 aa12.15□□□□□ -0.46
UBXN1-215ENST00000533476 C9orf163Q8N9P6 203 aa12.15□□□□□ -0.46
UBXN1-215ENST00000533476 A0A1W2PNM2 257 aa12.14□□□□□ -0.47
UBXN1-215ENST00000533476 Q6ZRN7 208 aaPredicted RBP12.14□□□□□ -0.47
UBXN1-215ENST00000533476 H7BZZ5 65 aa12.13□□□□□ -0.47
UBXN1-215ENST00000533476 CSMD3Q7Z407 3707 aa12.13□□□□□ -0.47
UBXN1-215ENST00000533476 BPY2O14599 106 aa12.13□□□□□ -0.47
UBXN1-215ENST00000533476 CHTF8P0CG12 524 aa12.13□□□□□ -0.47
UBXN1-215ENST00000533476 Q8NBF4 154 aa12.13□□□□□ -0.47
UBXN1-215ENST00000533476 SMIM29Q86T20 159 aa12.12□□□□□ -0.47
UBXN1-215ENST00000533476 PRLHP81277 87 aa12.11□□□□□ -0.47
UBXN1-215ENST00000533476 FAM236DA0A1B0GTK5 79 aa12.11□□□□□ -0.47
UBXN1-215ENST00000533476 NDUFC1O43677 76 aa12.11□□□□□ -0.47
UBXN1-215ENST00000533476 FAM236CP0DP71 79 aa12.11□□□□□ -0.47
UBXN1-215ENST00000533476 SPRR4Q96PI1 79 aa12.1□□□□□ -0.47
UBXN1-215ENST00000533476 PHF5AQ7RTV0 110 aaKnown RBP12.09□□□□□ -0.47
UBXN1-215ENST00000533476 DNAH7Q8WXX0 4024 aa12.08□□□□□ -0.48
UBXN1-215ENST00000533476 F8WEM9 126 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms