RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 H3BQ85 93 aa9.95□□□□□ -0.82
CACNA1E-208ENST00000533229 TLX1NBP0CAT3 122 aa9.95□□□□□ -0.82
CACNA1E-208ENST00000533229 UBL5Q9BZL1 73 aa9.95□□□□□ -0.82
CACNA1E-208ENST00000533229 KCNQ1DNQ9H478 68 aa9.95□□□□□ -0.82
CACNA1E-208ENST00000533229 NKAPP1Q8N9T2 125 aa9.94□□□□□ -0.82
CACNA1E-208ENST00000533229 UPK3BQ9BT76 320 aa9.94□□□□□ -0.82
CACNA1E-208ENST00000533229 FAM19A1Q7Z5A9 133 aa9.94□□□□□ -0.82
CACNA1E-208ENST00000533229 TRBV7-4A0A0J9YYF1 115 aa9.93□□□□□ -0.82
CACNA1E-208ENST00000533229 LOC107984640A0A0U1RRK4 108 aa9.93□□□□□ -0.82
CACNA1E-208ENST00000533229 KRTAP7-1Q8IUC3 87 aa9.93□□□□□ -0.82
CACNA1E-208ENST00000533229 SERP2Q8N6R1 65 aa9.93□□□□□ -0.82
CACNA1E-208ENST00000533229 ATP5EP2Q5VTU8 51 aa9.91□□□□□ -0.82
CACNA1E-208ENST00000533229 DNAH10Q8IVF4 4471 aa9.91□□□□□ -0.82
CACNA1E-208ENST00000533229 RPL37AP8A6NKH3 93 aa9.91□□□□□ -0.82
CACNA1E-208ENST00000533229 COL7A1Q02388 2944 aa9.9□□□□□ -0.82
CACNA1E-208ENST00000533229 PDE6GP18545 87 aa9.9□□□□□ -0.82
CACNA1E-208ENST00000533229 STAB2Q8WWQ8 2551 aa9.9□□□□□ -0.82
CACNA1E-208ENST00000533229 Q6ZVQ6 151 aa9.89□□□□□ -0.83
CACNA1E-208ENST00000533229 PLA2G2DQ9UNK4 145 aa9.89□□□□□ -0.83
CACNA1E-208ENST00000533229 GHRHP01286 108 aa9.89□□□□□ -0.83
CACNA1E-208ENST00000533229 KRTAP1-5Q9BYS1 174 aa9.88□□□□□ -0.83
CACNA1E-208ENST00000533229 LINC01547P58512 204 aaPredicted RBP9.88□□□□□ -0.83
CACNA1E-208ENST00000533229 RMI2Q96E14 147 aa9.88□□□□□ -0.83
CACNA1E-208ENST00000533229 DNAH9Q9NYC9 4486 aa9.87□□□□□ -0.83
CACNA1E-208ENST00000533229 IGLV1-50A0A075B6I6 118 aa9.87□□□□□ -0.83
CACNA1E-208ENST00000533229 KRTAP4-16G5E9R7 235 aaPredicted RBP9.87□□□□□ -0.83
CACNA1E-208ENST00000533229 IGLV5-37A0A075B6J1 123 aa9.86□□□□□ -0.83
CACNA1E-208ENST00000533229 HAMPP81172 84 aa9.86□□□□□ -0.83
CACNA1E-208ENST00000533229 DEFB105AQ8NG35 78 aa9.85□□□□□ -0.83
CACNA1E-208ENST00000533229 Q9BRP9 147 aa9.85□□□□□ -0.83
CACNA1E-208ENST00000533229 Q8N377 158 aa9.85□□□□□ -0.83
CACNA1E-208ENST00000533229 KRTAP21-3Q3LHN1 58 aa9.84□□□□□ -0.83
CACNA1E-208ENST00000533229 J3KT08 172 aa9.83□□□□□ -0.84
CACNA1E-208ENST00000533229 SPRR1AP35321 89 aa9.83□□□□□ -0.84
CACNA1E-208ENST00000533229 Q6ZRX8 168 aa9.83□□□□□ -0.84
CACNA1E-208ENST00000533229 FAM19A5Q7Z5A7 132 aaPredicted RBP9.83□□□□□ -0.84
CACNA1E-208ENST00000533229 MRPL55Q7Z7F7 128 aaKnown RBP9.82□□□□□ -0.84
CACNA1E-208ENST00000533229 PRYO14603 147 aa9.81□□□□□ -0.84
CACNA1E-208ENST00000533229 TMEM258P61165 79 aa9.81□□□□□ -0.84
CACNA1E-208ENST00000533229 CSMD3Q7Z407 3707 aa9.81□□□□□ -0.84
CACNA1E-208ENST00000533229 DNAH7Q8WXX0 4024 aa9.81□□□□□ -0.84
CACNA1E-208ENST00000533229 MDFIQ99750 246 aa9.8□□□□□ -0.84
CACNA1E-208ENST00000533229 OXTP01178 125 aa9.79□□□□□ -0.84
CACNA1E-208ENST00000533229 SCXQ7RTU7 201 aa9.79□□□□□ -0.84
CACNA1E-208ENST00000533229 ST20-AS1Q8NBB2 130 aa9.79□□□□□ -0.84
CACNA1E-208ENST00000533229 DHRS4-AS1Q9P1J3 65 aa9.79□□□□□ -0.84
CACNA1E-208ENST00000533229 ETDCA0A1B0GVM5 59 aa9.79□□□□□ -0.84
CACNA1E-208ENST00000533229 CXCL6P80162 114 aa9.79□□□□□ -0.84
CACNA1E-208ENST00000533229 DPH3Q96FX2 82 aa9.79□□□□□ -0.84
CACNA1E-208ENST00000533229 APLNQ9ULZ1 77 aa9.79□□□□□ -0.84
CACNA1E-208ENST00000533229 ERC2-IT1O76042 136 aa9.78□□□□□ -0.84
CACNA1E-208ENST00000533229 IGLV5-48A0A075B6I7 105 aa9.77□□□□□ -0.85
CACNA1E-208ENST00000533229 A0A096LNI7 61 aa9.76□□□□□ -0.85
CACNA1E-208ENST00000533229 RPS28P62857 69 aaKnown RBP9.76□□□□□ -0.85
CACNA1E-208ENST00000533229 TENM2Q9NT68 2774 aa9.76□□□□□ -0.85
CACNA1E-208ENST00000533229 DYNC2H1Q8NCM8 4307 aaKnown RBP9.76□□□□□ -0.85
CACNA1E-208ENST00000533229 IGKV2-24A0A0C4DH68 120 aa9.74□□□□□ -0.85
CACNA1E-208ENST00000533229 UBE2DNLQ8IWF7 75 aa9.74□□□□□ -0.85
CACNA1E-208ENST00000533229 C20orf197Q8N268 126 aa9.74□□□□□ -0.85
CACNA1E-208ENST00000533229 PLECQ15149 4684 aaKnown RBP9.74□□□□□ -0.85
CACNA1E-208ENST00000533229 A0A1W2PNN7 141 aa9.74□□□□□ -0.85
CACNA1E-208ENST00000533229 C3orf84H3BNL1 204 aa9.74□□□□□ -0.85
CACNA1E-208ENST00000533229 PSCAO43653 123 aa9.74□□□□□ -0.85
CACNA1E-208ENST00000533229 CNBPP62633 177 aaKnown RBP9.73□□□□□ -0.85
CACNA1E-208ENST00000533229 TNP2Q05952 138 aa9.73□□□□□ -0.85
CACNA1E-208ENST00000533229 REG3GQ6UW15 175 aa9.73□□□□□ -0.85
CACNA1E-208ENST00000533229 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.72□□□□□ -0.85
CACNA1E-208ENST00000533229 C16orf90A8MZG2 172 aa9.72□□□□□ -0.85
CACNA1E-208ENST00000533229 UBE2BP63146 152 aa9.71□□□□□ -0.85
CACNA1E-208ENST00000533229 B9D2Q9BPU9 175 aa9.71□□□□□ -0.86
CACNA1E-208ENST00000533229 A0A1W2PNM2 257 aa9.7□□□□□ -0.86
CACNA1E-208ENST00000533229 Q8N9L7 120 aa9.7□□□□□ -0.86
CACNA1E-208ENST00000533229 NREPQ16612 68 aa9.7□□□□□ -0.86
CACNA1E-208ENST00000533229 TRAV7A0A075B6U4 112 aa9.68□□□□□ -0.86
CACNA1E-208ENST00000533229 C1orf137Q5JT78 98 aa9.68□□□□□ -0.86
CACNA1E-208ENST00000533229 CHTF8P0CG12 524 aa9.67□□□□□ -0.86
CACNA1E-208ENST00000533229 SMIM29Q86T20 159 aa9.67□□□□□ -0.86
CACNA1E-208ENST00000533229 PRLHP81277 87 aa9.66□□□□□ -0.86
CACNA1E-208ENST00000533229 KRTAP11-1Q8IUC1 163 aa9.66□□□□□ -0.86
CACNA1E-208ENST00000533229 BCE1O60756 84 aa9.65□□□□□ -0.86
CACNA1E-208ENST00000533229 H7BZZ5 65 aa9.65□□□□□ -0.86
CACNA1E-208ENST00000533229 DNHD1Q96M86 4753 aa9.65□□□□□ -0.86
CACNA1E-208ENST00000533229 IGKV4-1P06312 121 aa9.64□□□□□ -0.87
CACNA1E-208ENST00000533229 FUSP35637 526 aaKnown RBP eCLIP9.64□□□□□ -0.87
CACNA1E-208ENST00000533229 SNURFQ9Y675 71 aa9.64□□□□□ -0.87
CACNA1E-208ENST00000533229 LRCOL1A6NCL2 159 aa9.64□□□□□ -0.87
CACNA1E-208ENST00000533229 BPY2O14599 106 aa9.64□□□□□ -0.87
CACNA1E-208ENST00000533229 A0A0G2JQZ4 141 aa9.63□□□□□ -0.87
CACNA1E-208ENST00000533229 Q8NBF4 154 aa9.63□□□□□ -0.87
CACNA1E-208ENST00000533229 FAM236DA0A1B0GTK5 79 aa9.62□□□□□ -0.87
CACNA1E-208ENST00000533229 FAM236CP0DP71 79 aa9.62□□□□□ -0.87
CACNA1E-208ENST00000533229 PHF5AQ7RTV0 110 aaKnown RBP9.62□□□□□ -0.87
CACNA1E-208ENST00000533229 STARD9Q9P2P6 4700 aa9.62□□□□□ -0.87
CACNA1E-208ENST00000533229 NBDYA0A0U1RRE5 68 aa9.61□□□□□ -0.87
CACNA1E-208ENST00000533229 C14orf177Q52M58 125 aa9.61□□□□□ -0.87
CACNA1E-208ENST00000533229 Q5XG85 94 aa9.61□□□□□ -0.87
CACNA1E-208ENST00000533229 SPRR4Q96PI1 79 aa9.61□□□□□ -0.87
CACNA1E-208ENST00000533229 PRKDCP78527 4128 aaKnown RBP9.61□□□□□ -0.87
CACNA1E-208ENST00000533229 KLKP1Q107X0 134 aa9.6□□□□□ -0.87
CACNA1E-208ENST00000533229 Q6ZRN7 208 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms