RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 A0A1W2PNN7 141 aa7.53□□□□□ -1.2
TRAF3IP2-212ENST00000532708 PFN2P35080 140 aa7.53□□□□□ -1.2
TRAF3IP2-212ENST00000532708 XAGE1AQ9HD64 81 aa7.53□□□□□ -1.2
TRAF3IP2-212ENST00000532708 PLAC8Q9NZF1 115 aa7.53□□□□□ -1.2
TRAF3IP2-212ENST00000532708 FAM168BA1KXE4 195 aa7.52□□□□□ -1.21
TRAF3IP2-212ENST00000532708 J3QQQ9 107 aa7.52□□□□□ -1.21
TRAF3IP2-212ENST00000532708 A4D1N5 150 aa7.51□□□□□ -1.21
TRAF3IP2-212ENST00000532708 C9orf129Q5T035 196 aaKnown RBP7.51□□□□□ -1.21
TRAF3IP2-212ENST00000532708 Q8N1X5 172 aa7.51□□□□□ -1.21
TRAF3IP2-212ENST00000532708 NDUFA12Q9UI09 145 aa7.51□□□□□ -1.21
TRAF3IP2-212ENST00000532708 LGALS3P17931 250 aaKnown RBP7.51□□□□□ -1.21
TRAF3IP2-212ENST00000532708 LINC00528Q8N1L1 170 aa7.51□□□□□ -1.21
TRAF3IP2-212ENST00000532708 A0A0U1RRA0 63 aa7.5□□□□□ -1.21
TRAF3IP2-212ENST00000532708 RPS28P62857 69 aaKnown RBP7.5□□□□□ -1.21
TRAF3IP2-212ENST00000532708 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
TRAF3IP2-212ENST00000532708 TEX49A0A1B0GTD5 131 aa7.5□□□□□ -1.21
TRAF3IP2-212ENST00000532708 UQCRQO14949 82 aa7.5□□□□□ -1.21
TRAF3IP2-212ENST00000532708 COX6CP09669 75 aa7.5□□□□□ -1.21
TRAF3IP2-212ENST00000532708 Q5VSD8 79 aa7.49□□□□□ -1.21
TRAF3IP2-212ENST00000532708 FAM19A5Q7Z5A7 132 aaPredicted RBP7.49□□□□□ -1.21
TRAF3IP2-212ENST00000532708 C3orf22Q8N5N4 141 aa7.49□□□□□ -1.21
TRAF3IP2-212ENST00000532708 PPDPFQ9H3Y8 114 aa7.49□□□□□ -1.21
TRAF3IP2-212ENST00000532708 SRRM2Q9UQ35 2752 aaKnown RBP7.48□□□□□ -1.21
TRAF3IP2-212ENST00000532708 FAM229AH3BQW9 127 aa7.48□□□□□ -1.21
TRAF3IP2-212ENST00000532708 LINC00158P58513 81 aa7.48□□□□□ -1.21
TRAF3IP2-212ENST00000532708 KRTAP7-1Q8IUC3 87 aa7.48□□□□□ -1.21
TRAF3IP2-212ENST00000532708 EPM2AB3EWF7 344 aa7.48□□□□□ -1.21
TRAF3IP2-212ENST00000532708 J3KT08 172 aa7.48□□□□□ -1.21
TRAF3IP2-212ENST00000532708 EIF4EBP3O60516 100 aaPredicted RBP7.48□□□□□ -1.21
TRAF3IP2-212ENST00000532708 COX17Q14061 63 aa7.48□□□□□ -1.21
TRAF3IP2-212ENST00000532708 Q1RN00 199 aa7.47□□□□□ -1.21
TRAF3IP2-212ENST00000532708 SERTAD4-AS1Q5TG53 156 aa7.47□□□□□ -1.21
TRAF3IP2-212ENST00000532708 PHF5AQ7RTV0 110 aaKnown RBP7.47□□□□□ -1.21
TRAF3IP2-212ENST00000532708 SND1-IT1Q9HBX3 110 aa7.46□□□□□ -1.21
TRAF3IP2-212ENST00000532708 TRIAP1O43715 76 aa7.46□□□□□ -1.22
TRAF3IP2-212ENST00000532708 LINC00643Q86TS7 51 aa7.46□□□□□ -1.22
TRAF3IP2-212ENST00000532708 MUSTN1Q8IVN3 82 aa7.46□□□□□ -1.22
TRAF3IP2-212ENST00000532708 VPS13BQ7Z7G8 4022 aa7.46□□□□□ -1.22
TRAF3IP2-212ENST00000532708 LST1O00453 97 aa7.45□□□□□ -1.22
TRAF3IP2-212ENST00000532708 C9orf153Q5TBE3 101 aa7.45□□□□□ -1.22
TRAF3IP2-212ENST00000532708 C7orf33Q8WU49 177 aa7.44□□□□□ -1.22
TRAF3IP2-212ENST00000532708 RPL37AP61513 92 aaKnown RBP7.44□□□□□ -1.22
TRAF3IP2-212ENST00000532708 MIR7-3HGQ8N6C7 128 aa7.44□□□□□ -1.22
TRAF3IP2-212ENST00000532708 DAND5Q8N907 189 aa7.44□□□□□ -1.22
TRAF3IP2-212ENST00000532708 A0A0J9YXY3 114 aa7.43□□□□□ -1.22
TRAF3IP2-212ENST00000532708 FAM236AA0A1B0GUQ0 79 aa7.43□□□□□ -1.22
TRAF3IP2-212ENST00000532708 FAM236BA0A1B0GV22 79 aa7.43□□□□□ -1.22
TRAF3IP2-212ENST00000532708 OR13C6PQ8NH95 151 aa7.43□□□□□ -1.22
TRAF3IP2-212ENST00000532708 C22orf24Q9Y442 160 aa7.43□□□□□ -1.22
TRAF3IP2-212ENST00000532708 PLA2G1BP04054 148 aaKnown RBP7.42□□□□□ -1.22
TRAF3IP2-212ENST00000532708 CRYGAP11844 174 aa7.42□□□□□ -1.22
TRAF3IP2-212ENST00000532708 KRTAP10-4P60372 401 aaPredicted RBP7.42□□□□□ -1.22
TRAF3IP2-212ENST00000532708 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
TRAF3IP2-212ENST00000532708 Q8NDZ9 215 aa7.41□□□□□ -1.22
TRAF3IP2-212ENST00000532708 PLA2G2DQ9UNK4 145 aa7.41□□□□□ -1.22
TRAF3IP2-212ENST00000532708 H7C2G1 150 aa7.4□□□□□ -1.22
TRAF3IP2-212ENST00000532708 TIMM17BO60830 172 aa7.4□□□□□ -1.22
TRAF3IP2-212ENST00000532708 COX7CP15954 63 aa7.4□□□□□ -1.22
TRAF3IP2-212ENST00000532708 ADAMTSL4-AS1Q5T5F5 129 aa7.4□□□□□ -1.22
TRAF3IP2-212ENST00000532708 LITAFQ99732 161 aa7.4□□□□□ -1.23
TRAF3IP2-212ENST00000532708 ABCA13Q86UQ4 5058 aa7.39□□□□□ -1.23
TRAF3IP2-212ENST00000532708 ATOX1O00244 68 aa7.39□□□□□ -1.23
TRAF3IP2-212ENST00000532708 VPREB1P12018 145 aa7.39□□□□□ -1.23
TRAF3IP2-212ENST00000532708 UBE2BP63146 152 aa7.39□□□□□ -1.23
TRAF3IP2-212ENST00000532708 MRPL55Q7Z7F7 128 aaKnown RBP7.39□□□□□ -1.23
TRAF3IP2-212ENST00000532708 NKAPP1Q8N9T2 125 aa7.39□□□□□ -1.23
TRAF3IP2-212ENST00000532708 NPC2P61916 151 aa7.39□□□□□ -1.23
TRAF3IP2-212ENST00000532708 PRR3P79522 188 aaKnown RBP7.39□□□□□ -1.23
TRAF3IP2-212ENST00000532708 PSORS1C2Q9UIG4 136 aa7.39□□□□□ -1.23
TRAF3IP2-212ENST00000532708 RPL37AP8A6NKH3 93 aa7.38□□□□□ -1.23
TRAF3IP2-212ENST00000532708 HIST1H4AP62805 103 aaKnown RBP7.38□□□□□ -1.23
TRAF3IP2-212ENST00000532708 LINC00167Q96N53 147 aa7.38□□□□□ -1.23
TRAF3IP2-212ENST00000532708 IGLV5-37A0A075B6J1 123 aa7.37□□□□□ -1.23
TRAF3IP2-212ENST00000532708 TMEM258P61165 79 aa7.37□□□□□ -1.23
TRAF3IP2-212ENST00000532708 GAGE2AQ6NT46 116 aa7.37□□□□□ -1.23
TRAF3IP2-212ENST00000532708 INAFM2P0DMQ5 153 aa7.36□□□□□ -1.23
TRAF3IP2-212ENST00000532708 SOSTDC1Q6X4U4 206 aa7.36□□□□□ -1.23
TRAF3IP2-212ENST00000532708 C1orf137Q5JT78 98 aa7.35□□□□□ -1.23
TRAF3IP2-212ENST00000532708 COPS9Q8WXC6 57 aa7.35□□□□□ -1.23
TRAF3IP2-212ENST00000532708 IGKV2-28A0A075B6P5 120 aa7.35□□□□□ -1.23
TRAF3IP2-212ENST00000532708 NCR3O14931 201 aa7.35□□□□□ -1.23
TRAF3IP2-212ENST00000532708 IGKV2D-28P01615 120 aa7.35□□□□□ -1.23
TRAF3IP2-212ENST00000532708 FLG2Q5D862 2391 aaPredicted RBP7.34□□□□□ -1.23
TRAF3IP2-212ENST00000532708 TRACP01848 142 aa7.34□□□□□ -1.23
TRAF3IP2-212ENST00000532708 PCLOQ9Y6V0 5065 aa7.34□□□□□ -1.24
TRAF3IP2-212ENST00000532708 LINC00308Q8TCZ7 52 aa7.33□□□□□ -1.24
TRAF3IP2-212ENST00000532708 CLEC2BQ92478 149 aa7.33□□□□□ -1.24
TRAF3IP2-212ENST00000532708 M0R378 163 aa7.32□□□□□ -1.24
TRAF3IP2-212ENST00000532708 SMCR5Q8TEV8 140 aa7.32□□□□□ -1.24
TRAF3IP2-212ENST00000532708 IGLV1-50A0A075B6I6 118 aa7.31□□□□□ -1.24
TRAF3IP2-212ENST00000532708 MYCBP2O75592 4640 aa7.3□□□□□ -1.24
TRAF3IP2-212ENST00000532708 IGLV7-43P04211 117 aa7.3□□□□□ -1.24
TRAF3IP2-212ENST00000532708 NDUFC2O95298 119 aa7.29□□□□□ -1.24
TRAF3IP2-212ENST00000532708 SERP2Q8N6R1 65 aa7.29□□□□□ -1.24
TRAF3IP2-212ENST00000532708 TRBV10-3A0A0K0K1G6 114 aa7.28□□□□□ -1.24
TRAF3IP2-212ENST00000532708 PKHD1L1Q86WI1 4243 aa7.28□□□□□ -1.24
TRAF3IP2-212ENST00000532708 Q6JHZ5 121 aa7.28□□□□□ -1.24
TRAF3IP2-212ENST00000532708 BCE1O60756 84 aa7.27□□□□□ -1.25
TRAF3IP2-212ENST00000532708 REG3GQ6UW15 175 aa7.27□□□□□ -1.25
TRAF3IP2-212ENST00000532708 SPINK6Q6UWN8 80 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms