RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 GAGE2AQ6NT46 116 aa9□□□□□ -0.97
LDLRAD3-205ENST00000532490 LITAFQ99732 161 aa9□□□□□ -0.97
LDLRAD3-205ENST00000532490 NPC2P61916 151 aa8.99□□□□□ -0.97
LDLRAD3-205ENST00000532490 S100A7L2Q5SY68 101 aa8.99□□□□□ -0.97
LDLRAD3-205ENST00000532490 C4orf48Q5BLP8 95 aa8.98□□□□□ -0.97
LDLRAD3-205ENST00000532490 PET117Q6UWS5 81 aa8.98□□□□□ -0.97
LDLRAD3-205ENST00000532490 TRAV23DV6A0A075B6W5 121 aa8.97□□□□□ -0.97
LDLRAD3-205ENST00000532490 CDIP1Q9H305 208 aa8.97□□□□□ -0.97
LDLRAD3-205ENST00000532490 SPINK1P00995 79 aa8.96□□□□□ -0.98
LDLRAD3-205ENST00000532490 ZNF73O43830 326 aaPredicted RBP8.95□□□□□ -0.98
LDLRAD3-205ENST00000532490 TIMM17BO60830 172 aa8.95□□□□□ -0.98
LDLRAD3-205ENST00000532490 C3orf79P0CE67 100 aa8.95□□□□□ -0.98
LDLRAD3-205ENST00000532490 COA6Q5JTJ3 125 aaKnown RBP8.95□□□□□ -0.98
LDLRAD3-205ENST00000532490 FP248Q71RG6 208 aaPredicted RBP8.95□□□□□ -0.98
LDLRAD3-205ENST00000532490 SSBP3-AS1Q7Z2R9 100 aa8.95□□□□□ -0.98
LDLRAD3-205ENST00000532490 LINC00308Q8TCZ7 52 aa8.95□□□□□ -0.98
LDLRAD3-205ENST00000532490 MOBPQ13875 183 aa8.94□□□□□ -0.98
LDLRAD3-205ENST00000532490 TTTY13Q9BZ97 58 aa8.94□□□□□ -0.98
LDLRAD3-205ENST00000532490 SPANXCQ9NY87 97 aa8.94□□□□□ -0.98
LDLRAD3-205ENST00000532490 IGLV9-49A0A0B4J1Y8 123 aa8.93□□□□□ -0.98
LDLRAD3-205ENST00000532490 JOSD1Q15040 202 aaPredicted RBP8.93□□□□□ -0.98
LDLRAD3-205ENST00000532490 FAT4Q6V0I7 4981 aa8.91□□□□□ -0.98
LDLRAD3-205ENST00000532490 ZNF815PA8K554 130 aa8.91□□□□□ -0.98
LDLRAD3-205ENST00000532490 RPS29P62273 56 aaKnown RBP8.91□□□□□ -0.98
LDLRAD3-205ENST00000532490 A0A0U1RQV1 116 aa8.9□□□□□ -0.98
LDLRAD3-205ENST00000532490 C5orf52A6NGY3 159 aa8.9□□□□□ -0.98
LDLRAD3-205ENST00000532490 KRTAP13-3Q3SY46 172 aa8.9□□□□□ -0.98
LDLRAD3-205ENST00000532490 ST20-AS1Q8NBB2 130 aa8.9□□□□□ -0.98
LDLRAD3-205ENST00000532490 Q8N377 158 aa8.89□□□□□ -0.99
LDLRAD3-205ENST00000532490 CBY1Q9Y3M2 126 aa8.89□□□□□ -0.99
LDLRAD3-205ENST00000532490 KRTDAPP60985 99 aa8.88□□□□□ -0.99
LDLRAD3-205ENST00000532490 OR13C6PQ8NH95 151 aa8.88□□□□□ -0.99
LDLRAD3-205ENST00000532490 HINT1P49773 126 aaPredicted RBP8.87□□□□□ -0.99
LDLRAD3-205ENST00000532490 SPANXDQ9BXN6 97 aa8.87□□□□□ -0.99
LDLRAD3-205ENST00000532490 SPRR1BP22528 89 aa8.86□□□□□ -0.99
LDLRAD3-205ENST00000532490 LCE2AQ5TA79 106 aaPredicted RBP8.86□□□□□ -0.99
LDLRAD3-205ENST00000532490 ANKRD39Q53RE8 183 aa8.85□□□□□ -0.99
LDLRAD3-205ENST00000532490 LINC00518Q8N0U6 118 aa8.85□□□□□ -0.99
LDLRAD3-205ENST00000532490 DHRS4-AS1Q9P1J3 65 aa8.84□□□□□ -0.99
LDLRAD3-205ENST00000532490 SLC25A20O43772 301 aa8.83□□□□□ -1
LDLRAD3-205ENST00000532490 ELOF1P60002 83 aaKnown RBP8.83□□□□□ -1
LDLRAD3-205ENST00000532490 C9orf153Q5TBE3 101 aa8.83□□□□□ -1
LDLRAD3-205ENST00000532490 C6orf99Q4VX62 202 aa8.82□□□□□ -1
LDLRAD3-205ENST00000532490 C20orf202A1L168 122 aa8.81□□□□□ -1
LDLRAD3-205ENST00000532490 SCGB1D4Q6XE38 83 aa8.81□□□□□ -1
LDLRAD3-205ENST00000532490 ATOH7Q8N100 152 aa8.81□□□□□ -1
LDLRAD3-205ENST00000532490 COX7BP24311 80 aa8.8□□□□□ -1
LDLRAD3-205ENST00000532490 ASB16-AS1Q495Z4 193 aa8.8□□□□□ -1
LDLRAD3-205ENST00000532490 IFITM1P13164 125 aa8.79□□□□□ -1
LDLRAD3-205ENST00000532490 PCP2Q8IVA1 136 aa8.79□□□□□ -1
LDLRAD3-205ENST00000532490 TRBV7-6A0A0J9YX20 115 aa8.78□□□□□ -1
LDLRAD3-205ENST00000532490 Q6ZVH6 145 aa8.78□□□□□ -1
LDLRAD3-205ENST00000532490 SLC25A34Q6PIV7 304 aa8.77□□□□□ -1.01
LDLRAD3-205ENST00000532490 MUSTN1Q8IVN3 82 aa8.77□□□□□ -1.01
LDLRAD3-205ENST00000532490 COPS9Q8WXC6 57 aa8.76□□□□□ -1.01
LDLRAD3-205ENST00000532490 LAMTOR3Q9UHA4 124 aa8.76□□□□□ -1.01
LDLRAD3-205ENST00000532490 AKR1D1P51857 326 aa8.75□□□□□ -1.01
LDLRAD3-205ENST00000532490 KRTAP4-1Q9BYQ7 146 aa8.75□□□□□ -1.01
LDLRAD3-205ENST00000532490 A0A1B0GWB2 263 aa8.73□□□□□ -1.01
LDLRAD3-205ENST00000532490 LINC01547P58512 204 aaPredicted RBP8.73□□□□□ -1.01
LDLRAD3-205ENST00000532490 SNRPEP62304 92 aaKnown RBP8.73□□□□□ -1.01
LDLRAD3-205ENST00000532490 TAL2Q16559 108 aa8.73□□□□□ -1.01
LDLRAD3-205ENST00000532490 XP32Q5T750 250 aa8.73□□□□□ -1.01
LDLRAD3-205ENST00000532490 SMIM29Q86T20 159 aa8.73□□□□□ -1.01
LDLRAD3-205ENST00000532490 HIST3H2BBQ8N257 126 aa8.73□□□□□ -1.01
LDLRAD3-205ENST00000532490 TEX49A0A1B0GTD5 131 aa8.72□□□□□ -1.01
LDLRAD3-205ENST00000532490 A6NDN8 102 aa8.72□□□□□ -1.01
LDLRAD3-205ENST00000532490 SEC61BP60468 96 aaKnown RBP8.72□□□□□ -1.01
LDLRAD3-205ENST00000532490 Q1RN00 199 aa8.72□□□□□ -1.01
LDLRAD3-205ENST00000532490 HRCT1Q6UXD1 115 aa8.72□□□□□ -1.01
LDLRAD3-205ENST00000532490 DEFB105AQ8NG35 78 aa8.72□□□□□ -1.01
LDLRAD3-205ENST00000532490 IGLV5-48A0A075B6I7 105 aa8.71□□□□□ -1.02
LDLRAD3-205ENST00000532490 HIST1H2BLQ99880 126 aa8.71□□□□□ -1.02
LDLRAD3-205ENST00000532490 CD164Q04900 197 aa8.7□□□□□ -1.02
LDLRAD3-205ENST00000532490 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
LDLRAD3-205ENST00000532490 SMIM11BQ8TCY0 68 aa8.69□□□□□ -1.02
LDLRAD3-205ENST00000532490 TRAV13-2A0A0B4J235 113 aa8.68□□□□□ -1.02
LDLRAD3-205ENST00000532490 A4D1N5 150 aa8.68□□□□□ -1.02
LDLRAD3-205ENST00000532490 PRO1933Q9H354 126 aa8.68□□□□□ -1.02
LDLRAD3-205ENST00000532490 KRTAP9-2Q9BYQ4 174 aa8.66□□□□□ -1.02
LDLRAD3-205ENST00000532490 S100A2P29034 98 aa8.65□□□□□ -1.02
LDLRAD3-205ENST00000532490 Q5XG85 94 aa8.65□□□□□ -1.02
LDLRAD3-205ENST00000532490 A0A0G2JQZ4 141 aa8.64□□□□□ -1.03
LDLRAD3-205ENST00000532490 H7C2G1 150 aa8.63□□□□□ -1.03
LDLRAD3-205ENST00000532490 NHP2Q9NX24 153 aaKnown RBP8.63□□□□□ -1.03
LDLRAD3-205ENST00000532490 S100A1P23297 94 aa8.62□□□□□ -1.03
LDLRAD3-205ENST00000532490 HSBP1L1C9JCN9 74 aa8.61□□□□□ -1.03
LDLRAD3-205ENST00000532490 LINC00575Q6W349 94 aa8.6□□□□□ -1.03
LDLRAD3-205ENST00000532490 C9orf92A6NGG3 77 aa8.59□□□□□ -1.03
LDLRAD3-205ENST00000532490 C1orf195Q5TG92 126 aa8.59□□□□□ -1.03
LDLRAD3-205ENST00000532490 S100A6P06703 90 aa8.58□□□□□ -1.04
LDLRAD3-205ENST00000532490 VAMP3Q15836 100 aa8.58□□□□□ -1.04
LDLRAD3-205ENST00000532490 PCOTHQ58A44 107 aa8.55□□□□□ -1.04
LDLRAD3-205ENST00000532490 LCE2CQ5TA81 110 aa8.55□□□□□ -1.04
LDLRAD3-205ENST00000532490 hADV29S1A0JD25 119 aa8.54□□□□□ -1.04
LDLRAD3-205ENST00000532490 SCGB1D1O95968 90 aa8.54□□□□□ -1.04
LDLRAD3-205ENST00000532490 COX8AP10176 69 aa8.54□□□□□ -1.04
LDLRAD3-205ENST00000532490 KRTAP19-2Q3LHN2 52 aa8.54□□□□□ -1.04
LDLRAD3-205ENST00000532490 Q6ZQY7 126 aa8.54□□□□□ -1.04
LDLRAD3-205ENST00000532490 IGLV8-61A0A075B6I0 122 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms