RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 GAGE2AQ6NT46 116 aa13.21□□□□□ -0.29
PPP1CA-207ENST00000532279 Q6ZRX8 168 aa13.21□□□□□ -0.29
PPP1CA-207ENST00000532279 Q9BRP9 147 aa13.21□□□□□ -0.29
PPP1CA-207ENST00000532279 TIMM17BO60830 172 aa13.19□□□□□ -0.3
PPP1CA-207ENST00000532279 LINC00308Q8TCZ7 52 aa13.19□□□□□ -0.3
PPP1CA-207ENST00000532279 LINC00483Q53H64 154 aa13.17□□□□□ -0.3
PPP1CA-207ENST00000532279 SPAG11AQ6PDA7 123 aa13.17□□□□□ -0.3
PPP1CA-207ENST00000532279 Q8NBF4 154 aa13.17□□□□□ -0.3
PPP1CA-207ENST00000532279 SPANXCQ9NY87 97 aa13.17□□□□□ -0.3
PPP1CA-207ENST00000532279 C20orf202A1L168 122 aa13.16□□□□□ -0.3
PPP1CA-207ENST00000532279 ZNF73O43830 326 aaPredicted RBP13.16□□□□□ -0.3
PPP1CA-207ENST00000532279 CTAG1AP78358 180 aa13.16□□□□□ -0.3
PPP1CA-207ENST00000532279 C4orf48Q5BLP8 95 aa13.16□□□□□ -0.3
PPP1CA-207ENST00000532279 OR13C6PQ8NH95 151 aa13.15□□□□□ -0.3
PPP1CA-207ENST00000532279 JOSD1Q15040 202 aaPredicted RBP13.14□□□□□ -0.31
PPP1CA-207ENST00000532279 ATOH7Q8N100 152 aa13.14□□□□□ -0.31
PPP1CA-207ENST00000532279 IGLV9-49A0A0B4J1Y8 123 aa13.13□□□□□ -0.31
PPP1CA-207ENST00000532279 ANKRD39Q53RE8 183 aa13.12□□□□□ -0.31
PPP1CA-207ENST00000532279 IGLV7-46A0A075B6I9 117 aa13.11□□□□□ -0.31
PPP1CA-207ENST00000532279 MOBPQ13875 183 aa13.11□□□□□ -0.31
PPP1CA-207ENST00000532279 SCGB1D4Q6XE38 83 aa13.11□□□□□ -0.31
PPP1CA-207ENST00000532279 CBY1Q9Y3M2 126 aa13.11□□□□□ -0.31
PPP1CA-207ENST00000532279 HINT1P49773 126 aaPredicted RBP13.1□□□□□ -0.31
PPP1CA-207ENST00000532279 ST20-AS1Q8NBB2 130 aa13.07□□□□□ -0.32
PPP1CA-207ENST00000532279 SPANXDQ9BXN6 97 aa13.07□□□□□ -0.32
PPP1CA-207ENST00000532279 TPRXLQ17RH7 258 aa13.04□□□□□ -0.32
PPP1CA-207ENST00000532279 LINC00518Q8N0U6 118 aa13.04□□□□□ -0.32
PPP1CA-207ENST00000532279 CDIP1Q9H305 208 aa13.04□□□□□ -0.32
PPP1CA-207ENST00000532279 SPINK1P00995 79 aa13.03□□□□□ -0.32
PPP1CA-207ENST00000532279 C9orf153Q5TBE3 101 aa13.03□□□□□ -0.32
PPP1CA-207ENST00000532279 SSBP3-AS1Q7Z2R9 100 aa13.03□□□□□ -0.32
PPP1CA-207ENST00000532279 PCP2Q8IVA1 136 aa13.03□□□□□ -0.32
PPP1CA-207ENST00000532279 AKR1D1P51857 326 aa13.01□□□□□ -0.33
PPP1CA-207ENST00000532279 S100A1P23297 94 aa13□□□□□ -0.33
PPP1CA-207ENST00000532279 S100A2P29034 98 aa13□□□□□ -0.33
PPP1CA-207ENST00000532279 HIST3H2BBQ8N257 126 aa13□□□□□ -0.33
PPP1CA-207ENST00000532279 C6orf99Q4VX62 202 aa12.99□□□□□ -0.33
PPP1CA-207ENST00000532279 COPS9Q8WXC6 57 aa12.99□□□□□ -0.33
PPP1CA-207ENST00000532279 DHRS4-AS1Q9P1J3 65 aa12.99□□□□□ -0.33
PPP1CA-207ENST00000532279 IFITM1P13164 125 aa12.98□□□□□ -0.33
PPP1CA-207ENST00000532279 COX7BP24311 80 aa12.98□□□□□ -0.33
PPP1CA-207ENST00000532279 FP248Q71RG6 208 aaPredicted RBP12.98□□□□□ -0.33
PPP1CA-207ENST00000532279 HIST1H2BLQ99880 126 aa12.98□□□□□ -0.33
PPP1CA-207ENST00000532279 C5orf52A6NGY3 159 aa12.97□□□□□ -0.33
PPP1CA-207ENST00000532279 MUSTN1Q8IVN3 82 aa12.97□□□□□ -0.33
PPP1CA-207ENST00000532279 ELOF1P60002 83 aaKnown RBP12.96□□□□□ -0.33
PPP1CA-207ENST00000532279 Q6ZVH6 145 aa12.95□□□□□ -0.34
PPP1CA-207ENST00000532279 A6NDN8 102 aa12.94□□□□□ -0.34
PPP1CA-207ENST00000532279 SNRPEP62304 92 aaKnown RBP12.94□□□□□ -0.34
PPP1CA-207ENST00000532279 S100A6P06703 90 aa12.92□□□□□ -0.34
PPP1CA-207ENST00000532279 RPS29P62273 56 aaKnown RBP12.92□□□□□ -0.34
PPP1CA-207ENST00000532279 Q8N377 158 aa12.92□□□□□ -0.34
PPP1CA-207ENST00000532279 SPRR1BP22528 89 aa12.91□□□□□ -0.34
PPP1CA-207ENST00000532279 SLC25A34Q6PIV7 304 aa12.9□□□□□ -0.34
PPP1CA-207ENST00000532279 HSBP1L1C9JCN9 74 aa12.89□□□□□ -0.35
PPP1CA-207ENST00000532279 DEFB105AQ8NG35 78 aa12.89□□□□□ -0.35
PPP1CA-207ENST00000532279 MUC2Q02817 5179 aa12.88□□□□□ -0.35
PPP1CA-207ENST00000532279 SLC25A20O43772 301 aa12.88□□□□□ -0.35
PPP1CA-207ENST00000532279 TRBV7-6A0A0J9YX20 115 aa12.87□□□□□ -0.35
PPP1CA-207ENST00000532279 TAL2Q16559 108 aa12.87□□□□□ -0.35
PPP1CA-207ENST00000532279 KRTAP13-3Q3SY46 172 aa12.87□□□□□ -0.35
PPP1CA-207ENST00000532279 LAMTOR3Q9UHA4 124 aa12.87□□□□□ -0.35
PPP1CA-207ENST00000532279 A0A1B0GWB2 263 aa12.86□□□□□ -0.35
PPP1CA-207ENST00000532279 TRAV13-2A0A0B4J235 113 aa12.84□□□□□ -0.35
PPP1CA-207ENST00000532279 A0A0U1RQV1 116 aa12.84□□□□□ -0.35
PPP1CA-207ENST00000532279 Q1RN00 199 aa12.84□□□□□ -0.35
PPP1CA-207ENST00000532279 HRCT1Q6UXD1 115 aa12.84□□□□□ -0.35
PPP1CA-207ENST00000532279 SMIM11BQ8TCY0 68 aa12.82□□□□□ -0.36
PPP1CA-207ENST00000532279 TEX49A0A1B0GTD5 131 aa12.81□□□□□ -0.36
PPP1CA-207ENST00000532279 SCGB1D1O95968 90 aa12.8□□□□□ -0.36
PPP1CA-207ENST00000532279 A4D1N5 150 aa12.77□□□□□ -0.37
PPP1CA-207ENST00000532279 MUC17Q685J3 4493 aa12.77□□□□□ -0.37
PPP1CA-207ENST00000532279 LINC01547P58512 204 aaPredicted RBP12.75□□□□□ -0.37
PPP1CA-207ENST00000532279 LIMD2Q9BT23 127 aa12.75□□□□□ -0.37
PPP1CA-207ENST00000532279 IGLV5-48A0A075B6I7 105 aa12.74□□□□□ -0.37
PPP1CA-207ENST00000532279 SMIM29Q86T20 159 aa12.74□□□□□ -0.37
PPP1CA-207ENST00000532279 NHP2Q9NX24 153 aaKnown RBP12.74□□□□□ -0.37
PPP1CA-207ENST00000532279 PRO1933Q9H354 126 aa12.73□□□□□ -0.37
PPP1CA-207ENST00000532279 VAMP3Q15836 100 aa12.7□□□□□ -0.38
PPP1CA-207ENST00000532279 C12orf57Q99622 126 aa12.7□□□□□ -0.38
PPP1CA-207ENST00000532279 H7C2G1 150 aa12.69□□□□□ -0.38
PPP1CA-207ENST00000532279 ASB16-AS1Q495Z4 193 aa12.69□□□□□ -0.38
PPP1CA-207ENST00000532279 HIST1H4GQ99525 98 aa12.69□□□□□ -0.38
PPP1CA-207ENST00000532279 A0A0G2JQZ4 141 aa12.68□□□□□ -0.38
PPP1CA-207ENST00000532279 COX8AP10176 69 aa12.68□□□□□ -0.38
PPP1CA-207ENST00000532279 CD164Q04900 197 aa12.68□□□□□ -0.38
PPP1CA-207ENST00000532279 LINC00575Q6W349 94 aa12.66□□□□□ -0.38
PPP1CA-207ENST00000532279 SEC61BP60468 96 aaKnown RBP12.65□□□□□ -0.38
PPP1CA-207ENST00000532279 XP32Q5T750 250 aa12.63□□□□□ -0.39
PPP1CA-207ENST00000532279 C14orf144Q96I85 54 aa12.62□□□□□ -0.39
PPP1CA-207ENST00000532279 hADV29S1A0JD25 119 aa12.61□□□□□ -0.39
PPP1CA-207ENST00000532279 DLEU1O43261 78 aa12.61□□□□□ -0.39
PPP1CA-207ENST00000532279 Q6ZQY7 126 aa12.61□□□□□ -0.39
PPP1CA-207ENST00000532279 PAM16Q9Y3D7 125 aa12.61□□□□□ -0.39
PPP1CA-207ENST00000532279 F8WEM9 126 aa12.59□□□□□ -0.39
PPP1CA-207ENST00000532279 C9orf92A6NGG3 77 aa12.58□□□□□ -0.4
PPP1CA-207ENST00000532279 SPATA45Q537H7 98 aa12.58□□□□□ -0.4
PPP1CA-207ENST00000532279 LCE2AQ5TA79 106 aaPredicted RBP12.57□□□□□ -0.4
PPP1CA-207ENST00000532279 KRTAP4-1Q9BYQ7 146 aa12.57□□□□□ -0.4
PPP1CA-207ENST00000532279 FAT4Q6V0I7 4981 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms