RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 OXTP01178 125 aa13.51□□□□□ -0.25
LRRK1-208ENST00000532029 A6NDN8 102 aa13.5□□□□□ -0.25
LRRK1-208ENST00000532029 SMIM6P0DI80 62 aa13.5□□□□□ -0.25
LRRK1-208ENST00000532029 A4D1N5 150 aa13.49□□□□□ -0.25
LRRK1-208ENST00000532029 TRAV13-2A0A0B4J235 113 aa13.48□□□□□ -0.25
LRRK1-208ENST00000532029 KRTAP29-1A8MX34 341 aaPredicted RBP13.48□□□□□ -0.25
LRRK1-208ENST00000532029 ZNF73O43830 326 aaPredicted RBP13.48□□□□□ -0.25
LRRK1-208ENST00000532029 MYCBP2O75592 4640 aa13.47□□□□□ -0.25
LRRK1-208ENST00000532029 LOC105371267A0A1B0GV96 52 aa13.47□□□□□ -0.25
LRRK1-208ENST00000532029 UQCR10Q9UDW1 63 aa13.47□□□□□ -0.25
LRRK1-208ENST00000532029 KRTAP4-16G5E9R7 235 aaPredicted RBP13.46□□□□□ -0.25
LRRK1-208ENST00000532029 HIGD2AQ9BW72 106 aa13.46□□□□□ -0.25
LRRK1-208ENST00000532029 J3QL48 77 aa13.45□□□□□ -0.26
LRRK1-208ENST00000532029 HINT1P49773 126 aaPredicted RBP13.45□□□□□ -0.26
LRRK1-208ENST00000532029 TAL2Q16559 108 aa13.45□□□□□ -0.26
LRRK1-208ENST00000532029 B5MCH6 92 aa13.43□□□□□ -0.26
LRRK1-208ENST00000532029 HERC1Q15751 4861 aa13.41□□□□□ -0.26
LRRK1-208ENST00000532029 LINC01600Q96MT4 127 aa13.41□□□□□ -0.26
LRRK1-208ENST00000532029 C12orf57Q99622 126 aa13.41□□□□□ -0.26
LRRK1-208ENST00000532029 Q6ZRX8 168 aa13.4□□□□□ -0.26
LRRK1-208ENST00000532029 CEND1Q8N111 149 aa13.4□□□□□ -0.26
LRRK1-208ENST00000532029 C6orf99Q4VX62 202 aa13.39□□□□□ -0.27
LRRK1-208ENST00000532029 FAT3Q8TDW7 4589 aa13.38□□□□□ -0.27
LRRK1-208ENST00000532029 HSD52Q0P140 79 aa13.38□□□□□ -0.27
LRRK1-208ENST00000532029 PRO1933Q9H354 126 aa13.38□□□□□ -0.27
LRRK1-208ENST00000532029 KRTAP1-4P0C5Y4 121 aa13.37□□□□□ -0.27
LRRK1-208ENST00000532029 SMCR5Q8TEV8 140 aa13.37□□□□□ -0.27
LRRK1-208ENST00000532029 LRP1Q07954 4544 aaKnown RBP13.37□□□□□ -0.27
LRRK1-208ENST00000532029 TMEM238LA0A1B0GVL6 79 aa13.36□□□□□ -0.27
LRRK1-208ENST00000532029 A6NJY4 79 aa13.36□□□□□ -0.27
LRRK1-208ENST00000532029 RAB37Q96AX2 223 aa13.36□□□□□ -0.27
LRRK1-208ENST00000532029 COX7BP24311 80 aa13.35□□□□□ -0.27
LRRK1-208ENST00000532029 RPL13AP40429 203 aaKnown RBP13.35□□□□□ -0.27
LRRK1-208ENST00000532029 SMIM11BQ8TCY0 68 aa13.35□□□□□ -0.27
LRRK1-208ENST00000532029 ZNF706Q9Y5V0 76 aaPredicted RBP13.35□□□□□ -0.27
LRRK1-208ENST00000532029 Q9BRP9 147 aa13.34□□□□□ -0.27
LRRK1-208ENST00000532029 CFC1BP0CG36 223 aa13.33□□□□□ -0.28
LRRK1-208ENST00000532029 CFC1P0CG37 223 aa13.33□□□□□ -0.28
LRRK1-208ENST00000532029 A0A0B4J2C4 111 aa13.32□□□□□ -0.28
LRRK1-208ENST00000532029 TRBV7-6A0A0J9YX20 115 aa13.32□□□□□ -0.28
LRRK1-208ENST00000532029 ELOF1P60002 83 aaKnown RBP13.32□□□□□ -0.28
LRRK1-208ENST00000532029 FXYD2P54710 66 aa13.31□□□□□ -0.28
LRRK1-208ENST00000532029 PRR26Q8N8Z3 221 aa13.31□□□□□ -0.28
LRRK1-208ENST00000532029 A0A1B0GWB2 263 aa13.3□□□□□ -0.28
LRRK1-208ENST00000532029 MT1HL1P0DM35 61 aa13.3□□□□□ -0.28
LRRK1-208ENST00000532029 DMBT1Q9UGM3 2413 aaPredicted RBP13.29□□□□□ -0.28
LRRK1-208ENST00000532029 ERC2-IT1O76042 136 aa13.29□□□□□ -0.28
LRRK1-208ENST00000532029 SPRR4Q96PI1 79 aa13.29□□□□□ -0.28
LRRK1-208ENST00000532029 DHRS4-AS1Q9P1J3 65 aa13.29□□□□□ -0.28
LRRK1-208ENST00000532029 H7C2G1 150 aa13.28□□□□□ -0.28
LRRK1-208ENST00000532029 KRTAP10-8P60410 259 aa13.28□□□□□ -0.28
LRRK1-208ENST00000532029 VAMP3Q15836 100 aa13.28□□□□□ -0.28
LRRK1-208ENST00000532029 ANAPC11Q9NYG5 84 aa13.28□□□□□ -0.28
LRRK1-208ENST00000532029 CRYGAP11844 174 aa13.27□□□□□ -0.29
LRRK1-208ENST00000532029 TSTD3H0UI37 97 aa13.26□□□□□ -0.29
LRRK1-208ENST00000532029 FAM229BQ4G0N7 80 aa13.26□□□□□ -0.29
LRRK1-208ENST00000532029 NHP2Q9NX24 153 aaKnown RBP13.24□□□□□ -0.29
LRRK1-208ENST00000532029 PRO1854Q9UHT4 67 aa13.24□□□□□ -0.29
LRRK1-208ENST00000532029 A0A087X002 238 aa13.23□□□□□ -0.29
LRRK1-208ENST00000532029 Q1RN00 199 aa13.23□□□□□ -0.29
LRRK1-208ENST00000532029 GAGE2AQ6NT46 116 aa13.23□□□□□ -0.29
LRRK1-208ENST00000532029 BVES-AS1Q5T3Y7 98 aa13.21□□□□□ -0.29
LRRK1-208ENST00000532029 SLC25A20O43772 301 aa13.19□□□□□ -0.3
LRRK1-208ENST00000532029 CTAG1AP78358 180 aa13.19□□□□□ -0.3
LRRK1-208ENST00000532029 LINC00483Q53H64 154 aa13.19□□□□□ -0.3
LRRK1-208ENST00000532029 ST20-AS1Q8NBB2 130 aa13.19□□□□□ -0.3
LRRK1-208ENST00000532029 TYMSOSQ8TAI1 123 aa13.18□□□□□ -0.3
LRRK1-208ENST00000532029 K7ERJ3 54 aa13.17□□□□□ -0.3
LRRK1-208ENST00000532029 M0R143 59 aa13.16□□□□□ -0.3
LRRK1-208ENST00000532029 KRTAP13-2Q52LG2 175 aa13.16□□□□□ -0.3
LRRK1-208ENST00000532029 LINC00575Q6W349 94 aa13.15□□□□□ -0.3
LRRK1-208ENST00000532029 TNXBP22105 4242 aa13.12□□□□□ -0.31
LRRK1-208ENST00000532029 hADV29S1A0JD25 119 aa13.12□□□□□ -0.31
LRRK1-208ENST00000532029 C3orf22Q8N5N4 141 aa13.12□□□□□ -0.31
LRRK1-208ENST00000532029 H0YGX0 51 aa13.11□□□□□ -0.31
LRRK1-208ENST00000532029 DEFB105AQ8NG35 78 aa13.11□□□□□ -0.31
LRRK1-208ENST00000532029 SPRR1BP22528 89 aa13.09□□□□□ -0.31
LRRK1-208ENST00000532029 IGLV9-49A0A0B4J1Y8 123 aa13.08□□□□□ -0.32
LRRK1-208ENST00000532029 SNCGO76070 127 aa13.08□□□□□ -0.32
LRRK1-208ENST00000532029 PSMB2P49721 201 aa13.08□□□□□ -0.32
LRRK1-208ENST00000532029 TEX49A0A1B0GTD5 131 aa13.07□□□□□ -0.32
LRRK1-208ENST00000532029 TRIAP1O43715 76 aa13.07□□□□□ -0.32
LRRK1-208ENST00000532029 TSPAN13O95857 204 aa13.07□□□□□ -0.32
LRRK1-208ENST00000532029 IGLV5-48A0A075B6I7 105 aa13.05□□□□□ -0.32
LRRK1-208ENST00000532029 LAMTOR3Q9UHA4 124 aa13.05□□□□□ -0.32
LRRK1-208ENST00000532029 COX6CP09669 75 aa13.04□□□□□ -0.32
LRRK1-208ENST00000532029 MOBPQ13875 183 aa13.04□□□□□ -0.32
LRRK1-208ENST00000532029 Q6ZQY7 126 aa13.04□□□□□ -0.32
LRRK1-208ENST00000532029 C9orf153Q5TBE3 101 aa13.03□□□□□ -0.32
LRRK1-208ENST00000532029 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.03□□□□□ -0.32
LRRK1-208ENST00000532029 LINC00304Q8N9R0 145 aa13.03□□□□□ -0.32
LRRK1-208ENST00000532029 LINC01547P58512 204 aaPredicted RBP13.02□□□□□ -0.33
LRRK1-208ENST00000532029 BATFQ16520 125 aa13.01□□□□□ -0.33
LRRK1-208ENST00000532029 SSBP3-AS1Q7Z2R9 100 aa13□□□□□ -0.33
LRRK1-208ENST00000532029 Q8NBF4 154 aa13□□□□□ -0.33
LRRK1-208ENST00000532029 FAM218AQ96MZ4 157 aa13□□□□□ -0.33
LRRK1-208ENST00000532029 A0A1B0GX51 115 aa12.99□□□□□ -0.33
LRRK1-208ENST00000532029 Q8N377 158 aa12.99□□□□□ -0.33
LRRK1-208ENST00000532029 HMCN2Q8NDA2 5059 aa12.99□□□□□ -0.33
LRRK1-208ENST00000532029 C4orf48Q5BLP8 95 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms