RNA–Protein interactions for RNA: ENST00000531318.1

NFRKB-208, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 4

Gene NFRKB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-208ENST00000531318 SSBP3-AS1Q7Z2R9 100 aa4.04□□□□□ -1.76
NFRKB-208ENST00000531318 SPRR1AP35321 89 aa4.03□□□□□ -1.76
NFRKB-208ENST00000531318 RPS29P62273 56 aaKnown RBP4.03□□□□□ -1.76
NFRKB-208ENST00000531318 S100A12P80511 92 aa4.03□□□□□ -1.76
NFRKB-208ENST00000531318 PMCHL1Q16048 86 aa4.03□□□□□ -1.76
NFRKB-208ENST00000531318 SFTA2Q6UW10 78 aa4.03□□□□□ -1.76
NFRKB-208ENST00000531318 BAGE3Q86Y29 109 aa4.03□□□□□ -1.76
NFRKB-208ENST00000531318 KCNQ1DNQ9H478 68 aa4.03□□□□□ -1.76
NFRKB-208ENST00000531318 B5MCH6 92 aa4.02□□□□□ -1.77
NFRKB-208ENST00000531318 KRTAP4-16G5E9R7 235 aaPredicted RBP4.02□□□□□ -1.77
NFRKB-208ENST00000531318 HRCT1Q6UXD1 115 aa4.02□□□□□ -1.77
NFRKB-208ENST00000531318 MIR7-3HGQ8N6C7 128 aa4.02□□□□□ -1.77
NFRKB-208ENST00000531318 A0A096LNJ9 63 aa4.01□□□□□ -1.77
NFRKB-208ENST00000531318 HBDP02042 147 aa4.01□□□□□ -1.77
NFRKB-208ENST00000531318 COX6B2Q6YFQ2 88 aa4.01□□□□□ -1.77
NFRKB-208ENST00000531318 C18orf32Q8TCD1 76 aa4.01□□□□□ -1.77
NFRKB-208ENST00000531318 Q9BRP9 147 aa4.01□□□□□ -1.77
NFRKB-208ENST00000531318 DDTP30046 118 aa4□□□□□ -1.77
NFRKB-208ENST00000531318 CHTOPQ9Y3Y2 248 aaKnown RBP4□□□□□ -1.77
NFRKB-208ENST00000531318 CHCHD1Q96BP2 118 aaKnown RBP3.99□□□□□ -1.77
NFRKB-208ENST00000531318 URB1-AS1Q96HZ7 61 aa3.99□□□□□ -1.77
NFRKB-208ENST00000531318 TMEM223A0PJW6 202 aa3.98□□□□□ -1.77
NFRKB-208ENST00000531318 IGLV6-57P01721 117 aa3.98□□□□□ -1.77
NFRKB-208ENST00000531318 Q6ZRX8 168 aa3.98□□□□□ -1.77
NFRKB-208ENST00000531318 ST20-AS1Q8NBB2 130 aa3.98□□□□□ -1.77
NFRKB-208ENST00000531318 YPEL4Q96NS1 127 aa3.98□□□□□ -1.77
NFRKB-208ENST00000531318 LIMD2Q9BT23 127 aa3.98□□□□□ -1.77
NFRKB-208ENST00000531318 HSBP1O75506 76 aa3.97□□□□□ -1.77
NFRKB-208ENST00000531318 S100A7L2Q5SY68 101 aa3.97□□□□□ -1.77
NFRKB-208ENST00000531318 MAP1LC3CQ9BXW4 147 aa3.97□□□□□ -1.77
NFRKB-208ENST00000531318 HERV-K104P63124 156 aa3.96□□□□□ -1.78
NFRKB-208ENST00000531318 JOSD1Q15040 202 aaPredicted RBP3.96□□□□□ -1.78
NFRKB-208ENST00000531318 IFI27L1Q96BM0 104 aa3.96□□□□□ -1.78
NFRKB-208ENST00000531318 TRAV23DV6A0A075B6W5 121 aa3.95□□□□□ -1.78
NFRKB-208ENST00000531318 TRAV12-1A0A0B4J245 112 aa3.95□□□□□ -1.78
NFRKB-208ENST00000531318 MYMXA0A1B0GTQ4 84 aa3.95□□□□□ -1.78
NFRKB-208ENST00000531318 LINC00587B1AMM8 73 aa3.95□□□□□ -1.78
NFRKB-208ENST00000531318 H0Y8G0 127 aa3.95□□□□□ -1.78
NFRKB-208ENST00000531318 H7C2G1 150 aa3.95□□□□□ -1.78
NFRKB-208ENST00000531318 NPC2P61916 151 aa3.95□□□□□ -1.78
NFRKB-208ENST00000531318 SLC7A5P1Q8MH63 180 aa3.95□□□□□ -1.78
NFRKB-208ENST00000531318 MIEN1Q9BRT3 115 aa3.95□□□□□ -1.78
NFRKB-208ENST00000531318 TRBV10-2A0A0K0K1G8 114 aa3.94□□□□□ -1.78
NFRKB-208ENST00000531318 TRGC2P03986 189 aa3.94□□□□□ -1.78
NFRKB-208ENST00000531318 Q6Q795 121 aa3.94□□□□□ -1.78
NFRKB-208ENST00000531318 SPANXB1Q9NS25 103 aaPredicted RBP3.94□□□□□ -1.78
NFRKB-208ENST00000531318 ZNF73O43830 326 aaPredicted RBP3.93□□□□□ -1.78
NFRKB-208ENST00000531318 TSPEAR-AS2P59090 65 aa3.93□□□□□ -1.78
NFRKB-208ENST00000531318 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
NFRKB-208ENST00000531318 USH2AO75445 5202 aa3.92□□□□□ -1.78
NFRKB-208ENST00000531318 COLCA2A8K830 154 aa3.92□□□□□ -1.78
NFRKB-208ENST00000531318 LEPROTL1O95214 131 aa3.92□□□□□ -1.78
NFRKB-208ENST00000531318 HINT1P49773 126 aaPredicted RBP3.92□□□□□ -1.78
NFRKB-208ENST00000531318 LAMTOR3Q9UHA4 124 aa3.92□□□□□ -1.78
NFRKB-208ENST00000531318 HSPB8Q9UJY1 196 aa3.92□□□□□ -1.78
NFRKB-208ENST00000531318 SERF1AO75920 110 aa3.91□□□□□ -1.78
NFRKB-208ENST00000531318 PLNP26678 52 aa3.91□□□□□ -1.78
NFRKB-208ENST00000531318 RPL37P61927 97 aaKnown RBP3.91□□□□□ -1.78
NFRKB-208ENST00000531318 Q1RN00 199 aa3.91□□□□□ -1.78
NFRKB-208ENST00000531318 SLC25A34Q6PIV7 304 aa3.91□□□□□ -1.78
NFRKB-208ENST00000531318 DEFB105AQ8NG35 78 aa3.91□□□□□ -1.78
NFRKB-208ENST00000531318 OR13C6PQ8NH95 151 aa3.91□□□□□ -1.78
NFRKB-208ENST00000531318 LOC107984156A0A0G2JMH3 177 aa3.9□□□□□ -1.79
NFRKB-208ENST00000531318 LEPROTO15243 131 aa3.9□□□□□ -1.79
NFRKB-208ENST00000531318 FABP4P15090 132 aa3.9□□□□□ -1.79
NFRKB-208ENST00000531318 TAL2Q16559 108 aa3.9□□□□□ -1.79
NFRKB-208ENST00000531318 ARL17AQ8IVW1 177 aa3.9□□□□□ -1.79
NFRKB-208ENST00000531318 A0A0G2JQZ4 141 aa3.89□□□□□ -1.79
NFRKB-208ENST00000531318 J3QQQ9 107 aa3.89□□□□□ -1.79
NFRKB-208ENST00000531318 DPM2O94777 84 aa3.89□□□□□ -1.79
NFRKB-208ENST00000531318 NDUFC2O95298 119 aa3.89□□□□□ -1.79
NFRKB-208ENST00000531318 LGALS3P17931 250 aaKnown RBP3.89□□□□□ -1.79
NFRKB-208ENST00000531318 SOSTDC1Q6X4U4 206 aa3.89□□□□□ -1.79
NFRKB-208ENST00000531318 C5orf52A6NGY3 159 aa3.88□□□□□ -1.79
NFRKB-208ENST00000531318 SPRR1BP22528 89 aa3.88□□□□□ -1.79
NFRKB-208ENST00000531318 HERVK_113P61574 105 aa3.88□□□□□ -1.79
NFRKB-208ENST00000531318 C1orf195Q5TG92 126 aa3.88□□□□□ -1.79
NFRKB-208ENST00000531318 PRO1933Q9H354 126 aa3.88□□□□□ -1.79
NFRKB-208ENST00000531318 DHRS4-AS1Q9P1J3 65 aa3.88□□□□□ -1.79
NFRKB-208ENST00000531318 IGKCP01834 107 aa3.87□□□□□ -1.79
NFRKB-208ENST00000531318 NMUP48645 174 aa3.87□□□□□ -1.79
NFRKB-208ENST00000531318 CD164Q04900 197 aa3.87□□□□□ -1.79
NFRKB-208ENST00000531318 PMCHL2Q9BQD1 86 aa3.87□□□□□ -1.79
NFRKB-208ENST00000531318 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
NFRKB-208ENST00000531318 COX7BP24311 80 aa3.86□□□□□ -1.79
NFRKB-208ENST00000531318 AKR1D1P51857 326 aa3.86□□□□□ -1.79
NFRKB-208ENST00000531318 ADAMTSL4-AS1Q5T5F5 129 aa3.86□□□□□ -1.79
NFRKB-208ENST00000531318 CBY1Q9Y3M2 126 aa3.86□□□□□ -1.79
NFRKB-208ENST00000531318 A0A0J9YXY3 114 aa3.85□□□□□ -1.79
NFRKB-208ENST00000531318 SYS1-DBNDD2H3BUS1 97 aa3.85□□□□□ -1.79
NFRKB-208ENST00000531318 HIST1H2BKO60814 126 aa3.85□□□□□ -1.79
NFRKB-208ENST00000531318 HIST1H2BJP06899 126 aa3.85□□□□□ -1.79
NFRKB-208ENST00000531318 HIST1H2BOP23527 126 aa3.85□□□□□ -1.79
NFRKB-208ENST00000531318 HIST1H2BBP33778 126 aa3.85□□□□□ -1.79
NFRKB-208ENST00000531318 HIST1H2BDP58876 126 aa3.85□□□□□ -1.79
NFRKB-208ENST00000531318 HIST1H2BCP62807 126 aa3.85□□□□□ -1.79
NFRKB-208ENST00000531318 HIST2H2BEQ16778 126 aa3.85□□□□□ -1.79
NFRKB-208ENST00000531318 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.85□□□□□ -1.79
NFRKB-208ENST00000531318 SMIM29Q86T20 159 aa3.85□□□□□ -1.79
NFRKB-208ENST00000531318 HIST1H2BHQ93079 126 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms