RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 K7EP34 96 aa6.29□□□□□ -1.4
CTNND1-228ENST00000531007 TRIAP1O43715 76 aa6.29□□□□□ -1.4
CTNND1-228ENST00000531007 PRR3P79522 188 aaKnown RBP6.29□□□□□ -1.4
CTNND1-228ENST00000531007 RYR3Q15413 4870 aa6.29□□□□□ -1.4
CTNND1-228ENST00000531007 Q8NDZ9 215 aa6.29□□□□□ -1.4
CTNND1-228ENST00000531007 SMIM11BQ8TCY0 68 aa6.29□□□□□ -1.4
CTNND1-228ENST00000531007 SPCS1Q9Y6A9 102 aa6.29□□□□□ -1.4
CTNND1-228ENST00000531007 TRAV23DV6A0A075B6W5 121 aa6.28□□□□□ -1.4
CTNND1-228ENST00000531007 TRBV10-3A0A0K0K1G6 114 aa6.28□□□□□ -1.4
CTNND1-228ENST00000531007 A0A1B0GX51 115 aa6.28□□□□□ -1.4
CTNND1-228ENST00000531007 EPM2AB3EWF7 344 aa6.28□□□□□ -1.4
CTNND1-228ENST00000531007 ATXN8Q156A1 80 aa6.28□□□□□ -1.4
CTNND1-228ENST00000531007 SERTAD4-AS1Q5TG53 156 aa6.28□□□□□ -1.4
CTNND1-228ENST00000531007 MRPL55Q7Z7F7 128 aaKnown RBP6.28□□□□□ -1.4
CTNND1-228ENST00000531007 KCNQ1DNQ9H478 68 aa6.28□□□□□ -1.4
CTNND1-228ENST00000531007 C22orf24Q9Y442 160 aa6.28□□□□□ -1.4
CTNND1-228ENST00000531007 HECTD4Q9Y4D8 3996 aa6.28□□□□□ -1.4
CTNND1-228ENST00000531007 DNAH17Q9UFH2 4485 aa6.27□□□□□ -1.41
CTNND1-228ENST00000531007 SACSQ9NZJ4 4579 aa6.27□□□□□ -1.41
CTNND1-228ENST00000531007 IGKV2-24A0A0C4DH68 120 aa6.27□□□□□ -1.41
CTNND1-228ENST00000531007 PRYO14603 147 aa6.27□□□□□ -1.41
CTNND1-228ENST00000531007 UBE2V1Q13404 147 aa6.27□□□□□ -1.41
CTNND1-228ENST00000531007 SPACA4Q8TDM5 124 aa6.27□□□□□ -1.41
CTNND1-228ENST00000531007 IGLV1-50A0A075B6I6 118 aa6.26□□□□□ -1.41
CTNND1-228ENST00000531007 M0QXV9 152 aa6.26□□□□□ -1.41
CTNND1-228ENST00000531007 ZNF73O43830 326 aaPredicted RBP6.26□□□□□ -1.41
CTNND1-228ENST00000531007 C7orf33Q8WU49 177 aa6.26□□□□□ -1.41
CTNND1-228ENST00000531007 DIRC1Q969H9 104 aa6.26□□□□□ -1.41
CTNND1-228ENST00000531007 NAA38Q9BRA0 125 aaKnown RBP6.26□□□□□ -1.41
CTNND1-228ENST00000531007 RYR2Q92736 4967 aa6.26□□□□□ -1.41
CTNND1-228ENST00000531007 LST1O00453 97 aa6.25□□□□□ -1.41
CTNND1-228ENST00000531007 TRACP01848 142 aa6.25□□□□□ -1.41
CTNND1-228ENST00000531007 FAM19A5Q7Z5A7 132 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-228ENST00000531007 DPH3Q96FX2 82 aa6.25□□□□□ -1.41
CTNND1-228ENST00000531007 LINC00167Q96N53 147 aa6.25□□□□□ -1.41
CTNND1-228ENST00000531007 FAM168BA1KXE4 195 aa6.24□□□□□ -1.41
CTNND1-228ENST00000531007 H3BQ85 93 aa6.24□□□□□ -1.41
CTNND1-228ENST00000531007 TCL1BO95988 128 aa6.24□□□□□ -1.41
CTNND1-228ENST00000531007 C6orf99Q4VX62 202 aa6.24□□□□□ -1.41
CTNND1-228ENST00000531007 PLAC8Q9NZF1 115 aa6.24□□□□□ -1.41
CTNND1-228ENST00000531007 A0A1W2PNN7 141 aa6.23□□□□□ -1.41
CTNND1-228ENST00000531007 F8W1H4 67 aa6.23□□□□□ -1.41
CTNND1-228ENST00000531007 SLC25A20O43772 301 aa6.23□□□□□ -1.41
CTNND1-228ENST00000531007 INAFM2P0DMQ5 153 aa6.23□□□□□ -1.41
CTNND1-228ENST00000531007 SPRR1AP35321 89 aa6.23□□□□□ -1.41
CTNND1-228ENST00000531007 KRTAP7-1Q8IUC3 87 aa6.23□□□□□ -1.41
CTNND1-228ENST00000531007 KRTAP23-1A1A580 65 aa6.22□□□□□ -1.41
CTNND1-228ENST00000531007 DNAL4O96015 105 aa6.22□□□□□ -1.41
CTNND1-228ENST00000531007 CHTF8P0CG12 524 aa6.22□□□□□ -1.41
CTNND1-228ENST00000531007 COX7BP24311 80 aa6.22□□□□□ -1.41
CTNND1-228ENST00000531007 ELOF1P60002 83 aaKnown RBP6.22□□□□□ -1.41
CTNND1-228ENST00000531007 A0A087WYN8 130 aa6.21□□□□□ -1.42
CTNND1-228ENST00000531007 H3BMG7 143 aa6.21□□□□□ -1.42
CTNND1-228ENST00000531007 LINC01620Q4KN68 170 aa6.21□□□□□ -1.42
CTNND1-228ENST00000531007 REG3GQ6UW15 175 aa6.21□□□□□ -1.42
CTNND1-228ENST00000531007 HYDINQ4G0P3 5121 aa6.21□□□□□ -1.42
CTNND1-228ENST00000531007 UBE2BP63146 152 aa6.2□□□□□ -1.42
CTNND1-228ENST00000531007 OCIAD2Q56VL3 154 aa6.2□□□□□ -1.42
CTNND1-228ENST00000531007 LINC00575Q6W349 94 aa6.2□□□□□ -1.42
CTNND1-228ENST00000531007 Q6ZSA8 131 aa6.2□□□□□ -1.42
CTNND1-228ENST00000531007 LINC01600Q96MT4 127 aa6.2□□□□□ -1.42
CTNND1-228ENST00000531007 KRTAP17-1Q9BYP8 105 aa6.2□□□□□ -1.42
CTNND1-228ENST00000531007 DHRS4-AS1Q9P1J3 65 aa6.2□□□□□ -1.42
CTNND1-228ENST00000531007 FAT2Q9NYQ8 4349 aa6.19□□□□□ -1.42
CTNND1-228ENST00000531007 ETDCA0A1B0GVM5 59 aa6.19□□□□□ -1.42
CTNND1-228ENST00000531007 hADV29S1A0JD25 119 aa6.19□□□□□ -1.42
CTNND1-228ENST00000531007 RPL37AP8A6NKH3 93 aa6.19□□□□□ -1.42
CTNND1-228ENST00000531007 H0Y9J4 135 aa6.19□□□□□ -1.42
CTNND1-228ENST00000531007 H3BT86 120 aa6.19□□□□□ -1.42
CTNND1-228ENST00000531007 CLEC2BQ92478 149 aa6.19□□□□□ -1.42
CTNND1-228ENST00000531007 KRTAP4-16G5E9R7 235 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-228ENST00000531007 A0A1B0GVY2 172 aa6.17□□□□□ -1.42
CTNND1-228ENST00000531007 B5MCH6 92 aa6.17□□□□□ -1.42
CTNND1-228ENST00000531007 C9JAW5 83 aa6.17□□□□□ -1.42
CTNND1-228ENST00000531007 PANO1I0J062 215 aa6.17□□□□□ -1.42
CTNND1-228ENST00000531007 C21orf62-AS1Q17RA5 79 aa6.17□□□□□ -1.42
CTNND1-228ENST00000531007 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.17□□□□□ -1.42
CTNND1-228ENST00000531007 Q6ZRX8 168 aa6.17□□□□□ -1.42
CTNND1-228ENST00000531007 PHF5AQ7RTV0 110 aaKnown RBP6.17□□□□□ -1.42
CTNND1-228ENST00000531007 FAM218AQ96MZ4 157 aa6.17□□□□□ -1.42
CTNND1-228ENST00000531007 TMEM256-PLSCR3K7ERE1 68 aa6.16□□□□□ -1.42
CTNND1-228ENST00000531007 ANKRD29Q8N6D5 301 aa6.16□□□□□ -1.42
CTNND1-228ENST00000531007 PPDPFLQ8WWR9 84 aa6.16□□□□□ -1.42
CTNND1-228ENST00000531007 ORMDL1Q9P0S3 153 aa6.16□□□□□ -1.42
CTNND1-228ENST00000531007 DNAH11Q96DT5 4516 aa6.16□□□□□ -1.42
CTNND1-228ENST00000531007 BCE1O60756 84 aa6.15□□□□□ -1.42
CTNND1-228ENST00000531007 PRO0461Q9UI25 63 aa6.15□□□□□ -1.42
CTNND1-228ENST00000531007 PKD1P98161 4303 aa6.15□□□□□ -1.43
CTNND1-228ENST00000531007 FUSP35637 526 aaKnown RBP eCLIP6.14□□□□□ -1.43
CTNND1-228ENST00000531007 KRTAP10-1P60331 282 aa6.14□□□□□ -1.43
CTNND1-228ENST00000531007 BAALC-AS2P0C853 105 aa6.13□□□□□ -1.43
CTNND1-228ENST00000531007 CIRBP-AS1Q8TBR5 109 aa6.13□□□□□ -1.43
CTNND1-228ENST00000531007 UBE2AP49459 152 aa6.12□□□□□ -1.43
CTNND1-228ENST00000531007 FAM19A1Q7Z5A9 133 aa6.12□□□□□ -1.43
CTNND1-228ENST00000531007 DNAH5Q8TE73 4624 aa6.12□□□□□ -1.43
CTNND1-228ENST00000531007 DNAH8Q96JB1 4490 aa6.11□□□□□ -1.43
CTNND1-228ENST00000531007 KRTAP5-3Q6L8H2 238 aa6.11□□□□□ -1.43
CTNND1-228ENST00000531007 SCXQ7RTU7 201 aa6.11□□□□□ -1.43
CTNND1-228ENST00000531007 TEN1Q86WV5 123 aa6.11□□□□□ -1.43
CTNND1-228ENST00000531007 FAM30AQ9NZY2 134 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms