RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 FAM19A1Q7Z5A9 133 aa12.9□□□□□ -0.34
CAPN1-220ENST00000530567 DIRC1Q969H9 104 aa12.9□□□□□ -0.34
CAPN1-220ENST00000530567 HIST1H4GQ99525 98 aa12.9□□□□□ -0.34
CAPN1-220ENST00000530567 TRAV23DV6A0A075B6W5 121 aa12.88□□□□□ -0.35
CAPN1-220ENST00000530567 A4D1N5 150 aa12.88□□□□□ -0.35
CAPN1-220ENST00000530567 OR13C6PQ8NH95 151 aa12.88□□□□□ -0.35
CAPN1-220ENST00000530567 KRTAP29-1A8MX34 341 aaPredicted RBP12.86□□□□□ -0.35
CAPN1-220ENST00000530567 ZNF73O43830 326 aaPredicted RBP12.84□□□□□ -0.35
CAPN1-220ENST00000530567 UQCR10Q9UDW1 63 aa12.84□□□□□ -0.35
CAPN1-220ENST00000530567 ETDCA0A1B0GVM5 59 aa12.83□□□□□ -0.36
CAPN1-220ENST00000530567 B5MCH6 92 aa12.83□□□□□ -0.36
CAPN1-220ENST00000530567 OXTP01178 125 aa12.83□□□□□ -0.36
CAPN1-220ENST00000530567 KRTAP1-4P0C5Y4 121 aa12.82□□□□□ -0.36
CAPN1-220ENST00000530567 TRAV13-2A0A0B4J235 113 aa12.81□□□□□ -0.36
CAPN1-220ENST00000530567 A6NDN8 102 aa12.81□□□□□ -0.36
CAPN1-220ENST00000530567 TAL2Q16559 108 aa12.81□□□□□ -0.36
CAPN1-220ENST00000530567 CBY1Q9Y3M2 126 aa12.81□□□□□ -0.36
CAPN1-220ENST00000530567 C12orf57Q99622 126 aa12.8□□□□□ -0.36
CAPN1-220ENST00000530567 Q6ZRX8 168 aa12.79□□□□□ -0.36
CAPN1-220ENST00000530567 LINC01600Q96MT4 127 aa12.79□□□□□ -0.36
CAPN1-220ENST00000530567 CEND1Q8N111 149 aa12.79□□□□□ -0.36
CAPN1-220ENST00000530567 HIGD2AQ9BW72 106 aa12.79□□□□□ -0.36
CAPN1-220ENST00000530567 PRO1933Q9H354 126 aa12.79□□□□□ -0.36
CAPN1-220ENST00000530567 MT1HL1P0DM35 61 aa12.78□□□□□ -0.36
CAPN1-220ENST00000530567 SMCR5Q8TEV8 140 aa12.78□□□□□ -0.36
CAPN1-220ENST00000530567 Q9BRP9 147 aa12.77□□□□□ -0.37
CAPN1-220ENST00000530567 HSD52Q0P140 79 aa12.76□□□□□ -0.37
CAPN1-220ENST00000530567 C6orf99Q4VX62 202 aa12.76□□□□□ -0.37
CAPN1-220ENST00000530567 CFC1BP0CG36 223 aa12.75□□□□□ -0.37
CAPN1-220ENST00000530567 CFC1P0CG37 223 aa12.75□□□□□ -0.37
CAPN1-220ENST00000530567 FXYD2P54710 66 aa12.75□□□□□ -0.37
CAPN1-220ENST00000530567 DMBT1Q9UGM3 2413 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-220ENST00000530567 TNXBP22105 4242 aa12.74□□□□□ -0.37
CAPN1-220ENST00000530567 SMIM11BQ8TCY0 68 aa12.74□□□□□ -0.37
CAPN1-220ENST00000530567 ERC2-IT1O76042 136 aa12.72□□□□□ -0.37
CAPN1-220ENST00000530567 RPL13AP40429 203 aaKnown RBP12.72□□□□□ -0.37
CAPN1-220ENST00000530567 A0A0B4J2C4 111 aa12.71□□□□□ -0.37
CAPN1-220ENST00000530567 J3QL48 77 aa12.71□□□□□ -0.37
CAPN1-220ENST00000530567 ELOF1P60002 83 aaKnown RBP12.71□□□□□ -0.37
CAPN1-220ENST00000530567 HINT1P49773 126 aaPredicted RBP12.71□□□□□ -0.38
CAPN1-220ENST00000530567 KRTAP10-8P60410 259 aa12.71□□□□□ -0.38
CAPN1-220ENST00000530567 TRBV7-6A0A0J9YX20 115 aa12.7□□□□□ -0.38
CAPN1-220ENST00000530567 COX7BP24311 80 aa12.7□□□□□ -0.38
CAPN1-220ENST00000530567 PRR26Q8N8Z3 221 aa12.7□□□□□ -0.38
CAPN1-220ENST00000530567 ANAPC11Q9NYG5 84 aa12.7□□□□□ -0.38
CAPN1-220ENST00000530567 SPRR4Q96PI1 79 aa12.69□□□□□ -0.38
CAPN1-220ENST00000530567 TMEM238LA0A1B0GVL6 79 aa12.68□□□□□ -0.38
CAPN1-220ENST00000530567 A6NJY4 79 aa12.68□□□□□ -0.38
CAPN1-220ENST00000530567 A0A087X002 238 aa12.67□□□□□ -0.38
CAPN1-220ENST00000530567 RAB37Q96AX2 223 aa12.66□□□□□ -0.38
CAPN1-220ENST00000530567 A0A1B0GWB2 263 aa12.65□□□□□ -0.38
CAPN1-220ENST00000530567 FAM229BQ4G0N7 80 aa12.63□□□□□ -0.39
CAPN1-220ENST00000530567 DHRS4-AS1Q9P1J3 65 aa12.63□□□□□ -0.39
CAPN1-220ENST00000530567 ZNF706Q9Y5V0 76 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-220ENST00000530567 H7C2G1 150 aa12.62□□□□□ -0.39
CAPN1-220ENST00000530567 BVES-AS1Q5T3Y7 98 aa12.62□□□□□ -0.39
CAPN1-220ENST00000530567 NHP2Q9NX24 153 aaKnown RBP12.62□□□□□ -0.39
CAPN1-220ENST00000530567 PRO1854Q9UHT4 67 aa12.62□□□□□ -0.39
CAPN1-220ENST00000530567 TSTD3H0UI37 97 aa12.61□□□□□ -0.39
CAPN1-220ENST00000530567 K7ERJ3 54 aa12.61□□□□□ -0.39
CAPN1-220ENST00000530567 KRTAP13-2Q52LG2 175 aa12.61□□□□□ -0.39
CAPN1-220ENST00000530567 LINC00483Q53H64 154 aa12.61□□□□□ -0.39
CAPN1-220ENST00000530567 ST20-AS1Q8NBB2 130 aa12.61□□□□□ -0.39
CAPN1-220ENST00000530567 CRYGAP11844 174 aa12.6□□□□□ -0.39
CAPN1-220ENST00000530567 CTAG1AP78358 180 aa12.6□□□□□ -0.39
CAPN1-220ENST00000530567 GAGE2AQ6NT46 116 aa12.58□□□□□ -0.4
CAPN1-220ENST00000530567 HERC1Q15751 4861 aa12.58□□□□□ -0.4
CAPN1-220ENST00000530567 VAMP3Q15836 100 aa12.56□□□□□ -0.4
CAPN1-220ENST00000530567 LINC00575Q6W349 94 aa12.55□□□□□ -0.4
CAPN1-220ENST00000530567 C3orf22Q8N5N4 141 aa12.54□□□□□ -0.4
CAPN1-220ENST00000530567 Q1RN00 199 aa12.53□□□□□ -0.4
CAPN1-220ENST00000530567 M0R143 59 aa12.52□□□□□ -0.41
CAPN1-220ENST00000530567 SPRR1BP22528 89 aa12.52□□□□□ -0.41
CAPN1-220ENST00000530567 TYMSOSQ8TAI1 123 aa12.52□□□□□ -0.41
CAPN1-220ENST00000530567 TRIAP1O43715 76 aa12.49□□□□□ -0.41
CAPN1-220ENST00000530567 TSPAN13O95857 204 aa12.49□□□□□ -0.41
CAPN1-220ENST00000530567 LINC01547P58512 204 aaPredicted RBP12.49□□□□□ -0.41
CAPN1-220ENST00000530567 IGLV5-48A0A075B6I7 105 aa12.48□□□□□ -0.41
CAPN1-220ENST00000530567 SLC25A20O43772 301 aa12.48□□□□□ -0.41
CAPN1-220ENST00000530567 hADV29S1A0JD25 119 aa12.47□□□□□ -0.41
CAPN1-220ENST00000530567 FAM218AQ96MZ4 157 aa12.46□□□□□ -0.41
CAPN1-220ENST00000530567 H0YGX0 51 aa12.45□□□□□ -0.42
CAPN1-220ENST00000530567 DEFB105AQ8NG35 78 aa12.45□□□□□ -0.42
CAPN1-220ENST00000530567 TEX49A0A1B0GTD5 131 aa12.44□□□□□ -0.42
CAPN1-220ENST00000530567 Q6ZQY7 126 aa12.44□□□□□ -0.42
CAPN1-220ENST00000530567 IGLV9-49A0A0B4J1Y8 123 aa12.43□□□□□ -0.42
CAPN1-220ENST00000530567 MOBPQ13875 183 aa12.42□□□□□ -0.42
CAPN1-220ENST00000530567 Q8N377 158 aa12.42□□□□□ -0.42
CAPN1-220ENST00000530567 SMIM29Q86T20 159 aa12.41□□□□□ -0.42
CAPN1-220ENST00000530567 PSMB2P49721 201 aa12.4□□□□□ -0.42
CAPN1-220ENST00000530567 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-220ENST00000530567 LINC00304Q8N9R0 145 aa12.39□□□□□ -0.43
CAPN1-220ENST00000530567 Q8NBF4 154 aa12.38□□□□□ -0.43
CAPN1-220ENST00000530567 CLEC2BQ92478 149 aa12.38□□□□□ -0.43
CAPN1-220ENST00000530567 LAMTOR3Q9UHA4 124 aa12.37□□□□□ -0.43
CAPN1-220ENST00000530567 BATFQ16520 125 aa12.37□□□□□ -0.43
CAPN1-220ENST00000530567 A0A1B0GX51 115 aa12.36□□□□□ -0.43
CAPN1-220ENST00000530567 C9orf153Q5TBE3 101 aa12.36□□□□□ -0.43
CAPN1-220ENST00000530567 SSBP3-AS1Q7Z2R9 100 aa12.36□□□□□ -0.43
CAPN1-220ENST00000530567 COX6CP09669 75 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms