RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 K7EMI3 77 aa2.55□□□□□ -2
CSDE1-212ENST00000529046 SCO1O75880 301 aa2.55□□□□□ -2
CSDE1-212ENST00000529046 HBBP68871 147 aa2.55□□□□□ -2
CSDE1-212ENST00000529046 SPAG11BQ08648 103 aa2.55□□□□□ -2
CSDE1-212ENST00000529046 C1orf137Q5JT78 98 aa2.55□□□□□ -2
CSDE1-212ENST00000529046 C5orf38Q86SI9 138 aa2.55□□□□□ -2
CSDE1-212ENST00000529046 SMIM2Q9BVW6 85 aa2.55□□□□□ -2
CSDE1-212ENST00000529046 GNB1LQ9BYB4 327 aa2.55□□□□□ -2
CSDE1-212ENST00000529046 C8orf17Q9NRJ1 99 aa2.55□□□□□ -2
CSDE1-212ENST00000529046 NAT8Q9UHE5 227 aa2.55□□□□□ -2
CSDE1-212ENST00000529046 LAMTOR2Q9Y2Q5 125 aa2.55□□□□□ -2
CSDE1-212ENST00000529046 CKS2P33552 79 aa2.54□□□□□ -2
CSDE1-212ENST00000529046 IFI27P40305 119 aaPredicted RBP2.54□□□□□ -2
CSDE1-212ENST00000529046 PMAIP1Q13794 54 aa2.54□□□□□ -2
CSDE1-212ENST00000529046 UNQ6190/PRO20217Q6UXQ8 127 aa2.54□□□□□ -2
CSDE1-212ENST00000529046 Q6ZUT4 128 aa2.54□□□□□ -2
CSDE1-212ENST00000529046 PHF5AQ7RTV0 110 aaKnown RBP2.54□□□□□ -2
CSDE1-212ENST00000529046 ATP5L2Q7Z4Y8 100 aa2.54□□□□□ -2
CSDE1-212ENST00000529046 C6orf48Q9UBA6 75 aa2.54□□□□□ -2
CSDE1-212ENST00000529046 BPY2O14599 106 aa2.53□□□□□ -2
CSDE1-212ENST00000529046 NUPR1O60356 82 aa2.53□□□□□ -2
CSDE1-212ENST00000529046 RPL39P62891 51 aaKnown RBP2.53□□□□□ -2
CSDE1-212ENST00000529046 SEC11AP67812 179 aa2.53□□□□□ -2
CSDE1-212ENST00000529046 JOSD1Q15040 202 aaPredicted RBP2.53□□□□□ -2
CSDE1-212ENST00000529046 PEA15Q15121 130 aa2.53□□□□□ -2
CSDE1-212ENST00000529046 RNASE13Q5GAN3 156 aaKnown RBP2.53□□□□□ -2
CSDE1-212ENST00000529046 TMEM136Q6ZRR5 245 aa2.53□□□□□ -2
CSDE1-212ENST00000529046 Q8IZM0 81 aa2.53□□□□□ -2
CSDE1-212ENST00000529046 ORMDL3Q8N138 153 aa2.53□□□□□ -2
CSDE1-212ENST00000529046 TMEM141Q96I45 108 aa2.53□□□□□ -2
CSDE1-212ENST00000529046 AMELXQ99217 191 aa2.53□□□□□ -2
CSDE1-212ENST00000529046 SND1-IT1Q9HBX3 110 aa2.53□□□□□ -2
CSDE1-212ENST00000529046 TP73-AS1Q9UF72 201 aa2.53□□□□□ -2
CSDE1-212ENST00000529046 MUC2Q02817 5179 aa2.53□□□□□ -2.01
CSDE1-212ENST00000529046 LINC01549A6NIU2 74 aa2.52□□□□□ -2.01
CSDE1-212ENST00000529046 D6R8Y8 96 aa2.52□□□□□ -2.01
CSDE1-212ENST00000529046 NPYP01303 97 aa2.52□□□□□ -2.01
CSDE1-212ENST00000529046 UBE2D1P51668 147 aa2.52□□□□□ -2.01
CSDE1-212ENST00000529046 S100A12P80511 92 aa2.52□□□□□ -2.01
CSDE1-212ENST00000529046 ADIRFQ15847 76 aa2.52□□□□□ -2.01
CSDE1-212ENST00000529046 IGIPA6NJ69 53 aa2.51□□□□□ -2.01
CSDE1-212ENST00000529046 HERVK_113P63121 156 aa2.51□□□□□ -2.01
CSDE1-212ENST00000529046 UBE2BP63146 152 aa2.51□□□□□ -2.01
CSDE1-212ENST00000529046 Q8N8P6 123 aa2.51□□□□□ -2.01
CSDE1-212ENST00000529046 PRELID3AQ96N28 172 aa2.51□□□□□ -2.01
CSDE1-212ENST00000529046 C2orf88Q9BSF0 95 aa2.51□□□□□ -2.01
CSDE1-212ENST00000529046 CYSLTR1Q9Y271 337 aa2.51□□□□□ -2.01
CSDE1-212ENST00000529046 COLCA2A8K830 154 aa2.5□□□□□ -2.01
CSDE1-212ENST00000529046 F8VRH5 84 aa2.5□□□□□ -2.01
CSDE1-212ENST00000529046 S100A2P29034 98 aa2.5□□□□□ -2.01
CSDE1-212ENST00000529046 RPL28P46779 137 aaKnown RBP2.5□□□□□ -2.01
CSDE1-212ENST00000529046 CKS1BP61024 79 aa2.5□□□□□ -2.01
CSDE1-212ENST00000529046 MRPL54Q6P161 138 aaKnown RBP2.5□□□□□ -2.01
CSDE1-212ENST00000529046 IGFL1Q6UW32 110 aa2.5□□□□□ -2.01
CSDE1-212ENST00000529046 C2orf82Q6UX34 121 aa2.5□□□□□ -2.01
CSDE1-212ENST00000529046 NXT2Q9NPJ8 142 aaKnown RBP2.5□□□□□ -2.01
CSDE1-212ENST00000529046 C22orf24Q9Y442 160 aa2.5□□□□□ -2.01
CSDE1-212ENST00000529046 LPAP08519 4548 aa2.49□□□□□ -2.01
CSDE1-212ENST00000529046 TMEM223A0PJW6 202 aa2.49□□□□□ -2.01
CSDE1-212ENST00000529046 BCE1O60756 84 aa2.49□□□□□ -2.01
CSDE1-212ENST00000529046 MT-ND4LP03901 98 aa2.49□□□□□ -2.01
CSDE1-212ENST00000529046 CRYGAP11844 174 aa2.49□□□□□ -2.01
CSDE1-212ENST00000529046 KRTAP13-2Q52LG2 175 aa2.49□□□□□ -2.01
CSDE1-212ENST00000529046 LUZP6Q538Z0 58 aa2.49□□□□□ -2.01
CSDE1-212ENST00000529046 SMIM20Q8N5G0 67 aa2.49□□□□□ -2.01
CSDE1-212ENST00000529046 OR13C6PQ8NH95 151 aa2.49□□□□□ -2.01
CSDE1-212ENST00000529046 TOMM6Q96B49 74 aa2.49□□□□□ -2.01
CSDE1-212ENST00000529046 TRAV9-1A0A075B6T8 112 aa2.48□□□□□ -2.01
CSDE1-212ENST00000529046 FAM236DA0A1B0GTK5 79 aa2.48□□□□□ -2.01
CSDE1-212ENST00000529046 LINC01546A6NGU7 62 aa2.48□□□□□ -2.01
CSDE1-212ENST00000529046 FAM236CP0DP71 79 aa2.48□□□□□ -2.01
CSDE1-212ENST00000529046 FAM229BQ4G0N7 80 aa2.48□□□□□ -2.01
CSDE1-212ENST00000529046 KRTAP13-1Q8IUC0 172 aa2.48□□□□□ -2.01
CSDE1-212ENST00000529046 CDKN2A-AS1Q9UH64 79 aa2.48□□□□□ -2.01
CSDE1-212ENST00000529046 LINC00313P59037 77 aa2.47□□□□□ -2.01
CSDE1-212ENST00000529046 FABP9Q0Z7S8 132 aa2.47□□□□□ -2.01
CSDE1-212ENST00000529046 TPRXLQ17RH7 258 aa2.47□□□□□ -2.01
CSDE1-212ENST00000529046 SFTA2Q6UW10 78 aa2.47□□□□□ -2.01
CSDE1-212ENST00000529046 TOMM7Q9P0U1 55 aa2.47□□□□□ -2.01
CSDE1-212ENST00000529046 TSTD3H0UI37 97 aa2.46□□□□□ -2.02
CSDE1-212ENST00000529046 COX17Q14061 63 aa2.46□□□□□ -2.02
CSDE1-212ENST00000529046 ANKRD29Q8N6D5 301 aa2.46□□□□□ -2.02
CSDE1-212ENST00000529046 CST9LQ9H4G1 147 aa2.46□□□□□ -2.02
CSDE1-212ENST00000529046 XAGE1AQ9HD64 81 aa2.46□□□□□ -2.02
CSDE1-212ENST00000529046 FAT4Q6V0I7 4981 aa2.45□□□□□ -2.02
CSDE1-212ENST00000529046 H3BRM9 83 aa2.45□□□□□ -2.02
CSDE1-212ENST00000529046 SPAG11AQ6PDA7 123 aa2.45□□□□□ -2.02
CSDE1-212ENST00000529046 COX7B2Q8TF08 81 aa2.45□□□□□ -2.02
CSDE1-212ENST00000529046 SCGB3A1Q96QR1 104 aa2.45□□□□□ -2.02
CSDE1-212ENST00000529046 SS18L2Q9UHA2 77 aa2.45□□□□□ -2.02
CSDE1-212ENST00000529046 FP248Q71RG6 208 aaPredicted RBP2.44□□□□□ -2.02
CSDE1-212ENST00000529046 LINC00304Q8N9R0 145 aa2.44□□□□□ -2.02
CSDE1-212ENST00000529046 PLEKHB2Q96CS7 222 aa2.44□□□□□ -2.02
CSDE1-212ENST00000529046 IGKV2D-26A0A0A0MRZ7 120 aa2.43□□□□□ -2.02
CSDE1-212ENST00000529046 A0A1B0GVG6 124 aa2.43□□□□□ -2.02
CSDE1-212ENST00000529046 K7ERS5 55 aa2.43□□□□□ -2.02
CSDE1-212ENST00000529046 M0R378 163 aa2.43□□□□□ -2.02
CSDE1-212ENST00000529046 IGLC3P0DOY3 106 aa2.43□□□□□ -2.02
CSDE1-212ENST00000529046 ADCYAP1P18509 176 aa2.43□□□□□ -2.02
CSDE1-212ENST00000529046 CLLU1Q5K131 121 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms