RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	SERTAD4-AS1	Q5TG53	156 aa		15.25	■□□□□ 0.03
GSDMD-208	ENST00000528475	C7orf33	Q8WU49	177 aa		15.25	■□□□□ 0.03
GSDMD-208	ENST00000528475	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	15.22	■□□□□ 0.03
GSDMD-208	ENST00000528475	BAHCC1	Q9P281	2608 aa		15.21	■□□□□ 0.03
GSDMD-208	ENST00000528475	IGLV5-37	A0A075B6J1	123 aa		15.21	■□□□□ 0.03
GSDMD-208	ENST00000528475	KLKP1	Q107X0	134 aa		15.2	■□□□□ 0.02
GSDMD-208	ENST00000528475	SCX	Q7RTU7	201 aa		15.19	■□□□□ 0.02
GSDMD-208	ENST00000528475	FBN1	P35555	2871 aa	Known RBP	15.19	■□□□□ 0.02
GSDMD-208	ENST00000528475		Q8N377	158 aa		15.18	■□□□□ 0.02
GSDMD-208	ENST00000528475	MRAP	Q8TCY5	172 aa		15.18	■□□□□ 0.02
GSDMD-208	ENST00000528475	DHRS4-AS1	Q9P1J3	65 aa		15.18	■□□□□ 0.02
GSDMD-208	ENST00000528475	IGLV5-48	A0A075B6I7	105 aa		15.17	■□□□□ 0.02
GSDMD-208	ENST00000528475	PRY	O14603	147 aa		15.17	■□□□□ 0.02
GSDMD-208	ENST00000528475	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	15.16	■□□□□ 0.02
GSDMD-208	ENST00000528475		H7BZZ5	65 aa		15.15	■□□□□ 0.02
GSDMD-208	ENST00000528475	SPRR1A	P35321	89 aa		15.15	■□□□□ 0.02
GSDMD-208	ENST00000528475		Q6ZRX8	168 aa		15.15	■□□□□ 0.02
GSDMD-208	ENST00000528475	LINC00588	Q9Y4M8	146 aa		15.14	■□□□□ 0.01
GSDMD-208	ENST00000528475	NREP	Q16612	68 aa		15.13	■□□□□ 0.01
GSDMD-208	ENST00000528475	IGLV1-50	A0A075B6I6	118 aa		15.13	■□□□□ 0.01
GSDMD-208	ENST00000528475		A0A1B0GW54	56 aa		15.13	■□□□□ 0.01
GSDMD-208	ENST00000528475	OXT	P01178	125 aa		15.13	■□□□□ 0.01
GSDMD-208	ENST00000528475	FAM236D	A0A1B0GTK5	79 aa		15.11	■□□□□ 0.01
GSDMD-208	ENST00000528475	FAM236C	P0DP71	79 aa		15.11	■□□□□ 0.01
GSDMD-208	ENST00000528475	DEFB105A	Q8NG35	78 aa		15.11	■□□□□ 0.01
GSDMD-208	ENST00000528475	RMI2	Q96E14	147 aa		15.1	■□□□□ 0.01
GSDMD-208	ENST00000528475	IGKV4-1	P06312	121 aa		15.1	■□□□□ 0.01
GSDMD-208	ENST00000528475		Q9BRP9	147 aa		15.09	■□□□□ 0.01
GSDMD-208	ENST00000528475	TM2D3	Q9BRN9	247 aa		15.08	■□□□□ 0.01
GSDMD-208	ENST00000528475	CASC10	Q5T4H9	136 aa		15.08	■□□□□ 0
GSDMD-208	ENST00000528475	TENM3	Q9P273	2699 aa		15.07	■□□□□ 0
GSDMD-208	ENST00000528475	ETDC	A0A1B0GVM5	59 aa		15.07	■□□□□ 0
GSDMD-208	ENST00000528475	FAM168B	A1KXE4	195 aa		15.07	■□□□□ 0
GSDMD-208	ENST00000528475	RPL37AP8	A6NKH3	93 aa		15.07	■□□□□ 0
GSDMD-208	ENST00000528475	BPY2	O14599	106 aa		15.07	■□□□□ 0
GSDMD-208	ENST00000528475	TNP2	Q05952	138 aa		15.07	■□□□□ 0
GSDMD-208	ENST00000528475	KRTAP7-1	Q8IUC3	87 aa		15.07	■□□□□ 0
GSDMD-208	ENST00000528475	PKD1L1	Q8TDX9	2849 aa		15.06	■□□□□ 0
GSDMD-208	ENST00000528475	ERC2-IT1	O76042	136 aa		15.05	■□□□□ 0
GSDMD-208	ENST00000528475	C3orf84	H3BNL1	204 aa		15.04	■□□□□ -0
GSDMD-208	ENST00000528475	STAB1	Q9NY15	2570 aa		15.04	■□□□□ -0
GSDMD-208	ENST00000528475	CMYA5	Q8N3K9	4069 aa		15.04	■□□□□ -0
GSDMD-208	ENST00000528475	DNAH3	Q8TD57	4116 aa		15.04	■□□□□ -0
GSDMD-208	ENST00000528475	NDUFC1	O43677	76 aa		15.04	■□□□□ -0
GSDMD-208	ENST00000528475	FUS	P35637	526 aa	Known RBP eCLIP	15.03	■□□□□ -0
GSDMD-208	ENST00000528475	SNURF	Q9Y675	71 aa		15.03	■□□□□ -0
GSDMD-208	ENST00000528475	EPM2A	B3EWF7	344 aa		15.02	□□□□□ -0.01
GSDMD-208	ENST00000528475	MRPL55	Q7Z7F7	128 aa	Known RBP	15.02	□□□□□ -0.01
GSDMD-208	ENST00000528475		Q8N9L7	120 aa		15.02	□□□□□ -0.01
GSDMD-208	ENST00000528475	ANK2	Q01484	3957 aa		15.01	□□□□□ -0.01
GSDMD-208	ENST00000528475		A0A1W2PNM2	257 aa		15	□□□□□ -0.01
GSDMD-208	ENST00000528475	SERP1	Q9Y6X1	66 aa		15	□□□□□ -0.01
GSDMD-208	ENST00000528475	C1orf137	Q5JT78	98 aa		14.98	□□□□□ -0.01
GSDMD-208	ENST00000528475		F8WEM9	126 aa		14.97	□□□□□ -0.01
GSDMD-208	ENST00000528475	ST20-AS1	Q8NBB2	130 aa		14.97	□□□□□ -0.01
GSDMD-208	ENST00000528475		Q8NBF4	154 aa		14.97	□□□□□ -0.01
GSDMD-208	ENST00000528475	OCR1	Q9BZK8	76 aa		14.97	□□□□□ -0.01
GSDMD-208	ENST00000528475	SPRR4	Q96PI1	79 aa		14.96	□□□□□ -0.02
GSDMD-208	ENST00000528475	DNAH1	Q9P2D7	4330 aa		14.95	□□□□□ -0.02
GSDMD-208	ENST00000528475	MAST4	O15021	2626 aa		14.95	□□□□□ -0.02
GSDMD-208	ENST00000528475	TMEM254	Q8TBM7	123 aa		14.94	□□□□□ -0.02
GSDMD-208	ENST00000528475		Q5XG85	94 aa		14.93	□□□□□ -0.02
GSDMD-208	ENST00000528475	C5orf47	Q569G3	176 aa		14.92	□□□□□ -0.02
GSDMD-208	ENST00000528475	REG3G	Q6UW15	175 aa		14.92	□□□□□ -0.02
GSDMD-208	ENST00000528475	ATP5E	P56381	51 aa	Predicted RBP	14.91	□□□□□ -0.02
GSDMD-208	ENST00000528475	UBE2B	P63146	152 aa		14.91	□□□□□ -0.02
GSDMD-208	ENST00000528475	COL6A5	A8TX70	2615 aa		14.89	□□□□□ -0.03
GSDMD-208	ENST00000528475		A0A0U1RQV1	116 aa		14.86	□□□□□ -0.03
GSDMD-208	ENST00000528475		K7EIL1	84 aa		14.86	□□□□□ -0.03
GSDMD-208	ENST00000528475	SMIM29	Q86T20	159 aa		14.86	□□□□□ -0.03
GSDMD-208	ENST00000528475	PRB2	P02812	416 aa	Predicted RBP	14.86	□□□□□ -0.03
GSDMD-208	ENST00000528475	C4orf26	Q17RF5	130 aa		14.83	□□□□□ -0.04
GSDMD-208	ENST00000528475	C16orf90	A8MZG2	172 aa		14.81	□□□□□ -0.04
GSDMD-208	ENST00000528475	CNBP	P62633	177 aa	Known RBP	14.81	□□□□□ -0.04
GSDMD-208	ENST00000528475	DSCR10	P59022	87 aa		14.8	□□□□□ -0.04
GSDMD-208	ENST00000528475	LINC00476	Q8WZB0	136 aa		14.8	□□□□□ -0.04
GSDMD-208	ENST00000528475		A0A096LNI7	61 aa		14.79	□□□□□ -0.04
GSDMD-208	ENST00000528475	LCE6A	A0A183	80 aa		14.78	□□□□□ -0.04
GSDMD-208	ENST00000528475	MDFI	Q99750	246 aa		14.77	□□□□□ -0.04
GSDMD-208	ENST00000528475	HUWE1	Q7Z6Z7	4374 aa	Known RBP	14.76	□□□□□ -0.05
GSDMD-208	ENST00000528475	IGLV8-61	A0A075B6I0	122 aa		14.76	□□□□□ -0.05
GSDMD-208	ENST00000528475	KRTAP1-5	Q9BYS1	174 aa		14.76	□□□□□ -0.05
GSDMD-208	ENST00000528475	SMIM26	A0A096LP01	95 aa		14.75	□□□□□ -0.05
GSDMD-208	ENST00000528475		A0A1W2PNN7	141 aa		14.74	□□□□□ -0.05
GSDMD-208	ENST00000528475	IGFL1	Q6UW32	110 aa		14.73	□□□□□ -0.05
GSDMD-208	ENST00000528475	HRCT1	Q6UXD1	115 aa		14.73	□□□□□ -0.05
GSDMD-208	ENST00000528475		K7EQZ3	153 aa		14.72	□□□□□ -0.05
GSDMD-208	ENST00000528475	HIGD2A	Q9BW72	106 aa		14.72	□□□□□ -0.05
GSDMD-208	ENST00000528475	FAM30A	Q9NZY2	134 aa		14.72	□□□□□ -0.05
GSDMD-208	ENST00000528475	NOTCH1	P46531	2555 aa		14.71	□□□□□ -0.06
GSDMD-208	ENST00000528475	IGKV2-24	A0A0C4DH68	120 aa		14.7	□□□□□ -0.06
GSDMD-208	ENST00000528475	PRLH	P81277	87 aa		14.7	□□□□□ -0.06
GSDMD-208	ENST00000528475	PSCA	O43653	123 aa		14.69	□□□□□ -0.06
GSDMD-208	ENST00000528475	C14orf177	Q52M58	125 aa		14.68	□□□□□ -0.06
GSDMD-208	ENST00000528475	FP248	Q71RG6	208 aa	Predicted RBP	14.66	□□□□□ -0.06
GSDMD-208	ENST00000528475	HCG22	E2RYF7	251 aa		14.64	□□□□□ -0.07
GSDMD-208	ENST00000528475		H0Y9J4	135 aa		14.64	□□□□□ -0.07
GSDMD-208	ENST00000528475	APLN	Q9ULZ1	77 aa		14.64	□□□□□ -0.07
GSDMD-208	ENST00000528475	NBEAL1	Q6ZS30	2694 aa		14.62	□□□□□ -0.07
GSDMD-208	ENST00000528475		A0A0G2JQZ4	141 aa		14.62	□□□□□ -0.07

Retrieved 100 of 20,778 RNA–protein pairs in 351.5 ms