RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 CDIP1Q9H305 208 aa6.38□□□□□ -1.39
NR1H3-230ENST00000527949 RPS29P62273 56 aaKnown RBP6.37□□□□□ -1.39
NR1H3-230ENST00000527949 JOSD1Q15040 202 aaPredicted RBP6.37□□□□□ -1.39
NR1H3-230ENST00000527949 C4orf48Q5BLP8 95 aa6.37□□□□□ -1.39
NR1H3-230ENST00000527949 S100A7L2Q5SY68 101 aa6.37□□□□□ -1.39
NR1H3-230ENST00000527949 ADAMTSL4-AS1Q5T5F5 129 aa6.37□□□□□ -1.39
NR1H3-230ENST00000527949 SOSTDC1Q6X4U4 206 aa6.37□□□□□ -1.39
NR1H3-230ENST00000527949 SSBP3-AS1Q7Z2R9 100 aa6.37□□□□□ -1.39
NR1H3-230ENST00000527949 LITAFQ99732 161 aa6.37□□□□□ -1.39
NR1H3-230ENST00000527949 FAT4Q6V0I7 4981 aa6.37□□□□□ -1.39
NR1H3-230ENST00000527949 IGLV7-46A0A075B6I9 117 aa6.36□□□□□ -1.39
NR1H3-230ENST00000527949 TRAV23DV6A0A075B6W5 121 aa6.36□□□□□ -1.39
NR1H3-230ENST00000527949 SPINK1P00995 79 aa6.36□□□□□ -1.39
NR1H3-230ENST00000527949 Q9BRP9 147 aa6.36□□□□□ -1.39
NR1H3-230ENST00000527949 SPANXCQ9NY87 97 aa6.36□□□□□ -1.39
NR1H3-230ENST00000527949 Q8NBF4 154 aa6.35□□□□□ -1.39
NR1H3-230ENST00000527949 PPDPFQ9H3Y8 114 aa6.35□□□□□ -1.39
NR1H3-230ENST00000527949 ZNF73O43830 326 aaPredicted RBP6.34□□□□□ -1.39
NR1H3-230ENST00000527949 EIF4EBP3O60516 100 aaPredicted RBP6.34□□□□□ -1.39
NR1H3-230ENST00000527949 ERC2-IT1O76042 136 aa6.34□□□□□ -1.39
NR1H3-230ENST00000527949 AKR1D1P51857 326 aa6.34□□□□□ -1.39
NR1H3-230ENST00000527949 LINC00308Q8TCZ7 52 aa6.34□□□□□ -1.39
NR1H3-230ENST00000527949 RETNLBQ9BQ08 111 aa6.34□□□□□ -1.39
NR1H3-230ENST00000527949 C3orf79P0CE67 100 aa6.33□□□□□ -1.4
NR1H3-230ENST00000527949 HINT1P49773 126 aaPredicted RBP6.33□□□□□ -1.4
NR1H3-230ENST00000527949 GAGE2AQ6NT46 116 aa6.33□□□□□ -1.4
NR1H3-230ENST00000527949 LINC00518Q8N0U6 118 aa6.33□□□□□ -1.4
NR1H3-230ENST00000527949 SPANXDQ9BXN6 97 aa6.33□□□□□ -1.4
NR1H3-230ENST00000527949 ZNF815PA8K554 130 aa6.32□□□□□ -1.4
NR1H3-230ENST00000527949 LCE2DQ5TA82 110 aaPredicted RBP6.32□□□□□ -1.4
NR1H3-230ENST00000527949 LINC01547P58512 204 aaPredicted RBP6.31□□□□□ -1.4
NR1H3-230ENST00000527949 COPS9Q8WXC6 57 aa6.31□□□□□ -1.4
NR1H3-230ENST00000527949 C20orf202A1L168 122 aa6.3□□□□□ -1.4
NR1H3-230ENST00000527949 SPRR1BP22528 89 aa6.3□□□□□ -1.4
NR1H3-230ENST00000527949 Q6ZVH6 145 aa6.3□□□□□ -1.4
NR1H3-230ENST00000527949 DHRS4-AS1Q9P1J3 65 aa6.3□□□□□ -1.4
NR1H3-230ENST00000527949 IFITM1P13164 125 aa6.29□□□□□ -1.4
NR1H3-230ENST00000527949 NPC2P61916 151 aa6.29□□□□□ -1.4
NR1H3-230ENST00000527949 MOBPQ13875 183 aa6.29□□□□□ -1.4
NR1H3-230ENST00000527949 TRBV7-6A0A0J9YX20 115 aa6.28□□□□□ -1.4
NR1H3-230ENST00000527949 KRTDAPP60985 99 aa6.28□□□□□ -1.4
NR1H3-230ENST00000527949 SNRPEP62304 92 aaKnown RBP6.28□□□□□ -1.4
NR1H3-230ENST00000527949 KRTAP13-3Q3SY46 172 aa6.28□□□□□ -1.4
NR1H3-230ENST00000527949 SLC25A34Q6PIV7 304 aa6.28□□□□□ -1.4
NR1H3-230ENST00000527949 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
NR1H3-230ENST00000527949 IGLV9-49A0A0B4J1Y8 123 aa6.27□□□□□ -1.41
NR1H3-230ENST00000527949 SLC25A20O43772 301 aa6.27□□□□□ -1.41
NR1H3-230ENST00000527949 ELOF1P60002 83 aaKnown RBP6.27□□□□□ -1.41
NR1H3-230ENST00000527949 Q8N377 158 aa6.27□□□□□ -1.41
NR1H3-230ENST00000527949 OR13C6PQ8NH95 151 aa6.27□□□□□ -1.41
NR1H3-230ENST00000527949 TTTY13Q9BZ97 58 aa6.26□□□□□ -1.41
NR1H3-230ENST00000527949 ANKRD39Q53RE8 183 aa6.25□□□□□ -1.41
NR1H3-230ENST00000527949 SCGB1D4Q6XE38 83 aa6.25□□□□□ -1.41
NR1H3-230ENST00000527949 COX7BP24311 80 aa6.24□□□□□ -1.41
NR1H3-230ENST00000527949 ST20-AS1Q8NBB2 130 aa6.24□□□□□ -1.41
NR1H3-230ENST00000527949 A0A1B0GWB2 263 aa6.23□□□□□ -1.41
NR1H3-230ENST00000527949 S100A6P06703 90 aa6.23□□□□□ -1.41
NR1H3-230ENST00000527949 C6orf99Q4VX62 202 aa6.23□□□□□ -1.41
NR1H3-230ENST00000527949 C9orf153Q5TBE3 101 aa6.23□□□□□ -1.41
NR1H3-230ENST00000527949 ASB16-AS1Q495Z4 193 aa6.22□□□□□ -1.41
NR1H3-230ENST00000527949 LAMTOR3Q9UHA4 124 aa6.22□□□□□ -1.41
NR1H3-230ENST00000527949 A4D1N5 150 aa6.21□□□□□ -1.42
NR1H3-230ENST00000527949 CD164Q04900 197 aa6.21□□□□□ -1.42
NR1H3-230ENST00000527949 TRAV13-2A0A0B4J235 113 aa6.2□□□□□ -1.42
NR1H3-230ENST00000527949 TEX49A0A1B0GTD5 131 aa6.2□□□□□ -1.42
NR1H3-230ENST00000527949 SEC61BP60468 96 aaKnown RBP6.2□□□□□ -1.42
NR1H3-230ENST00000527949 PCP2Q8IVA1 136 aa6.2□□□□□ -1.42
NR1H3-230ENST00000527949 LIMD2Q9BT23 127 aa6.2□□□□□ -1.42
NR1H3-230ENST00000527949 IGLV5-48A0A075B6I7 105 aa6.19□□□□□ -1.42
NR1H3-230ENST00000527949 MUSTN1Q8IVN3 82 aa6.19□□□□□ -1.42
NR1H3-230ENST00000527949 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
NR1H3-230ENST00000527949 HIST3H2BBQ8N257 126 aa6.19□□□□□ -1.42
NR1H3-230ENST00000527949 MUC17Q685J3 4493 aa6.19□□□□□ -1.42
NR1H3-230ENST00000527949 S100A2P29034 98 aa6.18□□□□□ -1.42
NR1H3-230ENST00000527949 XP32Q5T750 250 aa6.18□□□□□ -1.42
NR1H3-230ENST00000527949 Q5XG85 94 aa6.18□□□□□ -1.42
NR1H3-230ENST00000527949 HIST1H2BLQ99880 126 aa6.18□□□□□ -1.42
NR1H3-230ENST00000527949 NHP2Q9NX24 153 aaKnown RBP6.18□□□□□ -1.42
NR1H3-230ENST00000527949 A6NDN8 102 aa6.17□□□□□ -1.42
NR1H3-230ENST00000527949 TAL2Q16559 108 aa6.17□□□□□ -1.42
NR1H3-230ENST00000527949 PRO1933Q9H354 126 aa6.17□□□□□ -1.42
NR1H3-230ENST00000527949 HSBP1L1C9JCN9 74 aa6.16□□□□□ -1.42
NR1H3-230ENST00000527949 SMIM29Q86T20 159 aa6.16□□□□□ -1.42
NR1H3-230ENST00000527949 FSIP2Q5CZC0 6907 aa6.16□□□□□ -1.42
NR1H3-230ENST00000527949 SMIM11BQ8TCY0 68 aa6.14□□□□□ -1.43
NR1H3-230ENST00000527949 TMA7Q9Y2S6 64 aaKnown RBP6.14□□□□□ -1.43
NR1H3-230ENST00000527949 H7C2G1 150 aa6.12□□□□□ -1.43
NR1H3-230ENST00000527949 CFC1BP0CG36 223 aa6.12□□□□□ -1.43
NR1H3-230ENST00000527949 VAMP3Q15836 100 aa6.12□□□□□ -1.43
NR1H3-230ENST00000527949 Q1RN00 199 aa6.12□□□□□ -1.43
NR1H3-230ENST00000527949 DEFB105AQ8NG35 78 aa6.12□□□□□ -1.43
NR1H3-230ENST00000527949 LINC00575Q6W349 94 aa6.1□□□□□ -1.43
NR1H3-230ENST00000527949 DLEU1O43261 78 aa6.09□□□□□ -1.43
NR1H3-230ENST00000527949 IGLV8-61A0A075B6I0 122 aa6.08□□□□□ -1.44
NR1H3-230ENST00000527949 COX8AP10176 69 aa6.08□□□□□ -1.44
NR1H3-230ENST00000527949 HRCT1Q6UXD1 115 aa6.08□□□□□ -1.44
NR1H3-230ENST00000527949 PPDPFLQ8WWR9 84 aa6.08□□□□□ -1.44
NR1H3-230ENST00000527949 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
NR1H3-230ENST00000527949 C1orf195Q5TG92 126 aa6.07□□□□□ -1.44
NR1H3-230ENST00000527949 Q6JHZ5 121 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms