RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 SCGB1D4Q6XE38 83 aa10.76□□□□□ -0.69
TSPAN4-216ENST00000526055 TTTY13Q9BZ97 58 aa10.75□□□□□ -0.69
TSPAN4-216ENST00000526055 IGLV6-57P01721 117 aa10.74□□□□□ -0.69
TSPAN4-216ENST00000526055 S100A7L2Q5SY68 101 aa10.73□□□□□ -0.69
TSPAN4-216ENST00000526055 ADAMTSL4-AS1Q5T5F5 129 aa10.73□□□□□ -0.69
TSPAN4-216ENST00000526055 SMCR5Q8TEV8 140 aa10.73□□□□□ -0.69
TSPAN4-216ENST00000526055 CBY1Q9Y3M2 126 aa10.73□□□□□ -0.69
TSPAN4-216ENST00000526055 B5MCH6 92 aa10.72□□□□□ -0.69
TSPAN4-216ENST00000526055 JOSD1Q15040 202 aaPredicted RBP10.72□□□□□ -0.69
TSPAN4-216ENST00000526055 SOSTDC1Q6X4U4 206 aa10.72□□□□□ -0.69
TSPAN4-216ENST00000526055 PCP2Q8IVA1 136 aa10.72□□□□□ -0.69
TSPAN4-216ENST00000526055 LITAFQ99732 161 aa10.72□□□□□ -0.69
TSPAN4-216ENST00000526055 COPS9Q8WXC6 57 aa10.71□□□□□ -0.69
TSPAN4-216ENST00000526055 LPAP08519 4548 aa10.71□□□□□ -0.7
TSPAN4-216ENST00000526055 SPAG11AQ6PDA7 123 aa10.7□□□□□ -0.7
TSPAN4-216ENST00000526055 Q6ZVH6 145 aa10.7□□□□□ -0.7
TSPAN4-216ENST00000526055 C3orf22Q8N5N4 141 aa10.7□□□□□ -0.7
TSPAN4-216ENST00000526055 LINC00483Q53H64 154 aa10.69□□□□□ -0.7
TSPAN4-216ENST00000526055 Q6ZRX8 168 aa10.69□□□□□ -0.7
TSPAN4-216ENST00000526055 LINC00308Q8TCZ7 52 aa10.69□□□□□ -0.7
TSPAN4-216ENST00000526055 SPANXDQ9BXN6 97 aa10.69□□□□□ -0.7
TSPAN4-216ENST00000526055 SPANXCQ9NY87 97 aa10.69□□□□□ -0.7
TSPAN4-216ENST00000526055 TRAV23DV6A0A075B6W5 121 aa10.68□□□□□ -0.7
TSPAN4-216ENST00000526055 NPC2P61916 151 aa10.68□□□□□ -0.7
TSPAN4-216ENST00000526055 EIF4EBP3O60516 100 aaPredicted RBP10.67□□□□□ -0.7
TSPAN4-216ENST00000526055 VAMP8Q9BV40 100 aa10.67□□□□□ -0.7
TSPAN4-216ENST00000526055 IFITM1P13164 125 aa10.66□□□□□ -0.7
TSPAN4-216ENST00000526055 PPDPFQ9H3Y8 114 aa10.66□□□□□ -0.7
TSPAN4-216ENST00000526055 ZNF73O43830 326 aaPredicted RBP10.65□□□□□ -0.7
TSPAN4-216ENST00000526055 Q9BRP9 147 aa10.65□□□□□ -0.7
TSPAN4-216ENST00000526055 COX8AP10176 69 aa10.64□□□□□ -0.71
TSPAN4-216ENST00000526055 HINT1P49773 126 aaPredicted RBP10.64□□□□□ -0.71
TSPAN4-216ENST00000526055 SPATA45Q537H7 98 aa10.64□□□□□ -0.71
TSPAN4-216ENST00000526055 PAM16Q9Y3D7 125 aa10.64□□□□□ -0.71
TSPAN4-216ENST00000526055 C4orf48Q5BLP8 95 aa10.63□□□□□ -0.71
TSPAN4-216ENST00000526055 DLEU1O43261 78 aa10.62□□□□□ -0.71
TSPAN4-216ENST00000526055 ERC2-IT1O76042 136 aa10.62□□□□□ -0.71
TSPAN4-216ENST00000526055 PYY3Q5JQD4 70 aa10.62□□□□□ -0.71
TSPAN4-216ENST00000526055 GAGE2AQ6NT46 116 aa10.62□□□□□ -0.71
TSPAN4-216ENST00000526055 LINC00518Q8N0U6 118 aa10.62□□□□□ -0.71
TSPAN4-216ENST00000526055 Q8NBF4 154 aa10.6□□□□□ -0.71
TSPAN4-216ENST00000526055 SSBP3-AS1Q7Z2R9 100 aa10.59□□□□□ -0.71
TSPAN4-216ENST00000526055 OR13C6PQ8NH95 151 aa10.59□□□□□ -0.71
TSPAN4-216ENST00000526055 RETNLBQ9BQ08 111 aa10.59□□□□□ -0.71
TSPAN4-216ENST00000526055 SPINK1P00995 79 aa10.58□□□□□ -0.72
TSPAN4-216ENST00000526055 TPRXLQ17RH7 258 aa10.57□□□□□ -0.72
TSPAN4-216ENST00000526055 SLC25A34Q6PIV7 304 aa10.57□□□□□ -0.72
TSPAN4-216ENST00000526055 MUSTN1Q8IVN3 82 aa10.57□□□□□ -0.72
TSPAN4-216ENST00000526055 C14orf144Q96I85 54 aa10.57□□□□□ -0.72
TSPAN4-216ENST00000526055 IGLV7-46A0A075B6I9 117 aa10.56□□□□□ -0.72
TSPAN4-216ENST00000526055 RPS29P62273 56 aaKnown RBP10.55□□□□□ -0.72
TSPAN4-216ENST00000526055 FP248Q71RG6 208 aaPredicted RBP10.55□□□□□ -0.72
TSPAN4-216ENST00000526055 DHRS4-AS1Q9P1J3 65 aa10.55□□□□□ -0.72
TSPAN4-216ENST00000526055 MOBPQ13875 183 aa10.54□□□□□ -0.72
TSPAN4-216ENST00000526055 HIGD1BQ9P298 99 aa10.54□□□□□ -0.72
TSPAN4-216ENST00000526055 IGLV9-49A0A0B4J1Y8 123 aa10.53□□□□□ -0.72
TSPAN4-216ENST00000526055 HIST1H4GQ99525 98 aa10.53□□□□□ -0.72
TSPAN4-216ENST00000526055 TRAV13-2A0A0B4J235 113 aa10.5□□□□□ -0.73
TSPAN4-216ENST00000526055 TRBV7-6A0A0J9YX20 115 aa10.5□□□□□ -0.73
TSPAN4-216ENST00000526055 ELOF1P60002 83 aaKnown RBP10.5□□□□□ -0.73
TSPAN4-216ENST00000526055 SPRR1BP22528 89 aa10.49□□□□□ -0.73
TSPAN4-216ENST00000526055 COX7BP24311 80 aa10.49□□□□□ -0.73
TSPAN4-216ENST00000526055 C6orf99Q4VX62 202 aa10.49□□□□□ -0.73
TSPAN4-216ENST00000526055 CDIP1Q9H305 208 aa10.49□□□□□ -0.73
TSPAN4-216ENST00000526055 A6NDN8 102 aa10.48□□□□□ -0.73
TSPAN4-216ENST00000526055 ST20-AS1Q8NBB2 130 aa10.48□□□□□ -0.73
TSPAN4-216ENST00000526055 A4D1N5 150 aa10.47□□□□□ -0.73
TSPAN4-216ENST00000526055 C2orf91Q6ZV80 131 aa10.47□□□□□ -0.73
TSPAN4-216ENST00000526055 TAL2Q16559 108 aa10.46□□□□□ -0.73
TSPAN4-216ENST00000526055 C9orf153Q5TBE3 101 aa10.46□□□□□ -0.73
TSPAN4-216ENST00000526055 A0A1B0GWB2 263 aa10.44□□□□□ -0.74
TSPAN4-216ENST00000526055 SMIM6P0DI80 62 aa10.44□□□□□ -0.74
TSPAN4-216ENST00000526055 UQCR10Q9UDW1 63 aa10.44□□□□□ -0.74
TSPAN4-216ENST00000526055 SLC25A20O43772 301 aa10.43□□□□□ -0.74
TSPAN4-216ENST00000526055 Q8N377 158 aa10.43□□□□□ -0.74
TSPAN4-216ENST00000526055 LAMTOR3Q9UHA4 124 aa10.43□□□□□ -0.74
TSPAN4-216ENST00000526055 A0A0U1RQV1 116 aa10.41□□□□□ -0.74
TSPAN4-216ENST00000526055 TMEM238LA0A1B0GVL6 79 aa10.4□□□□□ -0.74
TSPAN4-216ENST00000526055 A6NJY4 79 aa10.4□□□□□ -0.74
TSPAN4-216ENST00000526055 CEND1Q8N111 149 aa10.4□□□□□ -0.74
TSPAN4-216ENST00000526055 TEX49A0A1B0GTD5 131 aa10.39□□□□□ -0.75
TSPAN4-216ENST00000526055 HSD52Q0P140 79 aa10.38□□□□□ -0.75
TSPAN4-216ENST00000526055 KRTAP13-3Q3SY46 172 aa10.38□□□□□ -0.75
TSPAN4-216ENST00000526055 MUC2Q02817 5179 aa10.38□□□□□ -0.75
TSPAN4-216ENST00000526055 SMIM11BQ8TCY0 68 aa10.37□□□□□ -0.75
TSPAN4-216ENST00000526055 RAB37Q96AX2 223 aa10.37□□□□□ -0.75
TSPAN4-216ENST00000526055 C12orf57Q99622 126 aa10.37□□□□□ -0.75
TSPAN4-216ENST00000526055 NHP2Q9NX24 153 aaKnown RBP10.37□□□□□ -0.75
TSPAN4-216ENST00000526055 LOC105371267A0A1B0GV96 52 aa10.36□□□□□ -0.75
TSPAN4-216ENST00000526055 A0A0B4J2C4 111 aa10.35□□□□□ -0.75
TSPAN4-216ENST00000526055 VAMP3Q15836 100 aa10.35□□□□□ -0.75
TSPAN4-216ENST00000526055 IGLV5-48A0A075B6I7 105 aa10.34□□□□□ -0.75
TSPAN4-216ENST00000526055 CFC1BP0CG36 223 aa10.34□□□□□ -0.75
TSPAN4-216ENST00000526055 CFC1P0CG37 223 aa10.34□□□□□ -0.75
TSPAN4-216ENST00000526055 LIMD2Q9BT23 127 aa10.34□□□□□ -0.75
TSPAN4-216ENST00000526055 CD164Q04900 197 aa10.33□□□□□ -0.76
TSPAN4-216ENST00000526055 DEFB105AQ8NG35 78 aa10.33□□□□□ -0.76
TSPAN4-216ENST00000526055 PRO1933Q9H354 126 aa10.32□□□□□ -0.76
TSPAN4-216ENST00000526055 LINC01547P58512 204 aaPredicted RBP10.31□□□□□ -0.76
TSPAN4-216ENST00000526055 Q1RN00 199 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms