RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 DDTP30046 118 aa6.71□□□□□ -1.34
HIF3A-209ENST00000525854 VAMP8Q9BV40 100 aa6.71□□□□□ -1.34
HIF3A-209ENST00000525854 IGLV7-46A0A075B6I9 117 aa6.7□□□□□ -1.34
HIF3A-209ENST00000525854 A0A0U1RQV1 116 aa6.7□□□□□ -1.34
HIF3A-209ENST00000525854 LOC105371267A0A1B0GV96 52 aa6.69□□□□□ -1.34
HIF3A-209ENST00000525854 B5MCH6 92 aa6.69□□□□□ -1.34
HIF3A-209ENST00000525854 NDUFC2O95298 119 aa6.69□□□□□ -1.34
HIF3A-209ENST00000525854 TPRXLQ17RH7 258 aa6.69□□□□□ -1.34
HIF3A-209ENST00000525854 S100A7L2Q5SY68 101 aa6.69□□□□□ -1.34
HIF3A-209ENST00000525854 E9PLD3 99 aa6.68□□□□□ -1.34
HIF3A-209ENST00000525854 LINC00483Q53H64 154 aa6.68□□□□□ -1.34
HIF3A-209ENST00000525854 CDIP1Q9H305 208 aa6.68□□□□□ -1.34
HIF3A-209ENST00000525854 PPDPFQ9H3Y8 114 aa6.68□□□□□ -1.34
HIF3A-209ENST00000525854 A0A0J9YXY3 114 aa6.67□□□□□ -1.34
HIF3A-209ENST00000525854 IGLV6-57P01721 117 aa6.67□□□□□ -1.34
HIF3A-209ENST00000525854 GAGE2AQ6NT46 116 aa6.67□□□□□ -1.34
HIF3A-209ENST00000525854 Q6ZRX8 168 aa6.67□□□□□ -1.34
HIF3A-209ENST00000525854 Q8NBF4 154 aa6.67□□□□□ -1.34
HIF3A-209ENST00000525854 SPINK1P00995 79 aa6.66□□□□□ -1.34
HIF3A-209ENST00000525854 FP248Q71RG6 208 aaPredicted RBP6.66□□□□□ -1.34
HIF3A-209ENST00000525854 CBY1Q9Y3M2 126 aa6.66□□□□□ -1.34
HIF3A-209ENST00000525854 MUC2Q02817 5179 aa6.66□□□□□ -1.34
HIF3A-209ENST00000525854 TRAV23DV6A0A075B6W5 121 aa6.65□□□□□ -1.34
HIF3A-209ENST00000525854 TSTD3H0UI37 97 aa6.65□□□□□ -1.34
HIF3A-209ENST00000525854 PYY3Q5JQD4 70 aa6.65□□□□□ -1.34
HIF3A-209ENST00000525854 ERC2-IT1O76042 136 aa6.64□□□□□ -1.35
HIF3A-209ENST00000525854 NPC2P61916 151 aa6.64□□□□□ -1.35
HIF3A-209ENST00000525854 ADAMTSL4-AS1Q5T5F5 129 aa6.64□□□□□ -1.35
HIF3A-209ENST00000525854 C12orf57Q99622 126 aa6.64□□□□□ -1.35
HIF3A-209ENST00000525854 Q9BRP9 147 aa6.64□□□□□ -1.35
HIF3A-209ENST00000525854 ZNF73O43830 326 aaPredicted RBP6.63□□□□□ -1.35
HIF3A-209ENST00000525854 HINT1P49773 126 aaPredicted RBP6.63□□□□□ -1.35
HIF3A-209ENST00000525854 MOBPQ13875 183 aa6.63□□□□□ -1.35
HIF3A-209ENST00000525854 SPATA45Q537H7 98 aa6.63□□□□□ -1.35
HIF3A-209ENST00000525854 SOSTDC1Q6X4U4 206 aa6.63□□□□□ -1.35
HIF3A-209ENST00000525854 SSBP3-AS1Q7Z2R9 100 aa6.63□□□□□ -1.35
HIF3A-209ENST00000525854 COPS9Q8WXC6 57 aa6.63□□□□□ -1.35
HIF3A-209ENST00000525854 IGLV9-49A0A0B4J1Y8 123 aa6.62□□□□□ -1.35
HIF3A-209ENST00000525854 EIF4EBP3O60516 100 aaPredicted RBP6.62□□□□□ -1.35
HIF3A-209ENST00000525854 TIMM17BO60830 172 aa6.62□□□□□ -1.35
HIF3A-209ENST00000525854 ATOH7Q8N100 152 aa6.62□□□□□ -1.35
HIF3A-209ENST00000525854 SPANXCQ9NY87 97 aa6.62□□□□□ -1.35
HIF3A-209ENST00000525854 PAM16Q9Y3D7 125 aa6.62□□□□□ -1.35
HIF3A-209ENST00000525854 RPS29P62273 56 aaKnown RBP6.61□□□□□ -1.35
HIF3A-209ENST00000525854 LINC00308Q8TCZ7 52 aa6.61□□□□□ -1.35
HIF3A-209ENST00000525854 LITAFQ99732 161 aa6.61□□□□□ -1.35
HIF3A-209ENST00000525854 ZNF815PA8K554 130 aa6.6□□□□□ -1.35
HIF3A-209ENST00000525854 SLC25A34Q6PIV7 304 aa6.6□□□□□ -1.35
HIF3A-209ENST00000525854 LINC00518Q8N0U6 118 aa6.6□□□□□ -1.35
HIF3A-209ENST00000525854 UQCR10Q9UDW1 63 aa6.6□□□□□ -1.35
HIF3A-209ENST00000525854 SCGB1D4Q6XE38 83 aa6.59□□□□□ -1.35
HIF3A-209ENST00000525854 OR13C6PQ8NH95 151 aa6.59□□□□□ -1.35
HIF3A-209ENST00000525854 SPANXDQ9BXN6 97 aa6.59□□□□□ -1.35
HIF3A-209ENST00000525854 DLEU1O43261 78 aa6.58□□□□□ -1.36
HIF3A-209ENST00000525854 SLC25A20O43772 301 aa6.57□□□□□ -1.36
HIF3A-209ENST00000525854 COX8AP10176 69 aa6.57□□□□□ -1.36
HIF3A-209ENST00000525854 KRTAP13-3Q3SY46 172 aa6.57□□□□□ -1.36
HIF3A-209ENST00000525854 C9orf153Q5TBE3 101 aa6.57□□□□□ -1.36
HIF3A-209ENST00000525854 DHRS4-AS1Q9P1J3 65 aa6.57□□□□□ -1.36
HIF3A-209ENST00000525854 Q6ZVH6 145 aa6.56□□□□□ -1.36
HIF3A-209ENST00000525854 Q8N377 158 aa6.56□□□□□ -1.36
HIF3A-209ENST00000525854 ST20-AS1Q8NBB2 130 aa6.56□□□□□ -1.36
HIF3A-209ENST00000525854 TTTY13Q9BZ97 58 aa6.55□□□□□ -1.36
HIF3A-209ENST00000525854 ANKRD39Q53RE8 183 aa6.54□□□□□ -1.36
HIF3A-209ENST00000525854 MUC17Q685J3 4493 aa6.53□□□□□ -1.36
HIF3A-209ENST00000525854 SPRR1BP22528 89 aa6.53□□□□□ -1.36
HIF3A-209ENST00000525854 COX7BP24311 80 aa6.53□□□□□ -1.36
HIF3A-209ENST00000525854 C14orf144Q96I85 54 aa6.53□□□□□ -1.36
HIF3A-209ENST00000525854 TMEM238LA0A1B0GVL6 79 aa6.52□□□□□ -1.37
HIF3A-209ENST00000525854 A6NJY4 79 aa6.52□□□□□ -1.37
HIF3A-209ENST00000525854 IFITM1P13164 125 aa6.52□□□□□ -1.37
HIF3A-209ENST00000525854 ELOF1P60002 83 aaKnown RBP6.52□□□□□ -1.37
HIF3A-209ENST00000525854 C6orf99Q4VX62 202 aa6.52□□□□□ -1.37
HIF3A-209ENST00000525854 HIGD1BQ9P298 99 aa6.52□□□□□ -1.37
HIF3A-209ENST00000525854 LAMTOR3Q9UHA4 124 aa6.52□□□□□ -1.37
HIF3A-209ENST00000525854 M0R143 59 aa6.51□□□□□ -1.37
HIF3A-209ENST00000525854 TAL2Q16559 108 aa6.51□□□□□ -1.37
HIF3A-209ENST00000525854 ASB16-AS1Q495Z4 193 aa6.51□□□□□ -1.37
HIF3A-209ENST00000525854 FAT4Q6V0I7 4981 aa6.51□□□□□ -1.37
HIF3A-209ENST00000525854 TRBV7-6A0A0J9YX20 115 aa6.5□□□□□ -1.37
HIF3A-209ENST00000525854 SEC61BP60468 96 aaKnown RBP6.5□□□□□ -1.37
HIF3A-209ENST00000525854 HIST1H4GQ99525 98 aa6.5□□□□□ -1.37
HIF3A-209ENST00000525854 PCP2Q8IVA1 136 aa6.49□□□□□ -1.37
HIF3A-209ENST00000525854 LIMD2Q9BT23 127 aa6.49□□□□□ -1.37
HIF3A-209ENST00000525854 PRO1933Q9H354 126 aa6.49□□□□□ -1.37
HIF3A-209ENST00000525854 A0A1B0GWB2 263 aa6.48□□□□□ -1.37
HIF3A-209ENST00000525854 A6NDN8 102 aa6.48□□□□□ -1.37
HIF3A-209ENST00000525854 HSD52Q0P140 79 aa6.48□□□□□ -1.37
HIF3A-209ENST00000525854 LCE2AQ5TA79 106 aaPredicted RBP6.48□□□□□ -1.37
HIF3A-209ENST00000525854 TEX49A0A1B0GTD5 131 aa6.47□□□□□ -1.37
HIF3A-209ENST00000525854 DEFB105AQ8NG35 78 aa6.47□□□□□ -1.37
HIF3A-209ENST00000525854 A4D1N5 150 aa6.46□□□□□ -1.38
HIF3A-209ENST00000525854 MUSTN1Q8IVN3 82 aa6.46□□□□□ -1.38
HIF3A-209ENST00000525854 TRAV13-2A0A0B4J235 113 aa6.45□□□□□ -1.38
HIF3A-209ENST00000525854 CD164Q04900 197 aa6.45□□□□□ -1.38
HIF3A-209ENST00000525854 Q1RN00 199 aa6.45□□□□□ -1.38
HIF3A-209ENST00000525854 HRCT1Q6UXD1 115 aa6.45□□□□□ -1.38
HIF3A-209ENST00000525854 PCP4L1A6NKN8 68 aa6.44□□□□□ -1.38
HIF3A-209ENST00000525854 XP32Q5T750 250 aa6.44□□□□□ -1.38
HIF3A-209ENST00000525854 NHP2Q9NX24 153 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms