RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 LOC107984156A0A0G2JMH3 177 aa3.44□□□□□ -1.86
CCDC90B-204ENST00000525504 SPRR1AP35321 89 aa3.44□□□□□ -1.86
CCDC90B-204ENST00000525504 LINC00158P58513 81 aa3.44□□□□□ -1.86
CCDC90B-204ENST00000525504 C5orf47Q569G3 176 aa3.44□□□□□ -1.86
CCDC90B-204ENST00000525504 ARL17AQ8IVW1 177 aa3.44□□□□□ -1.86
CCDC90B-204ENST00000525504 MAP1LC3CQ9BXW4 147 aa3.44□□□□□ -1.86
CCDC90B-204ENST00000525504 FAT4Q6V0I7 4981 aa3.44□□□□□ -1.86
CCDC90B-204ENST00000525504 IGKV2D-26A0A0A0MRZ7 120 aa3.43□□□□□ -1.86
CCDC90B-204ENST00000525504 LINC00587B1AMM8 73 aa3.43□□□□□ -1.86
CCDC90B-204ENST00000525504 KRTAP4-16G5E9R7 235 aaPredicted RBP3.43□□□□□ -1.86
CCDC90B-204ENST00000525504 SEC61BP60468 96 aaKnown RBP3.43□□□□□ -1.86
CCDC90B-204ENST00000525504 PRLHP81277 87 aa3.43□□□□□ -1.86
CCDC90B-204ENST00000525504 FAM19A1Q7Z5A9 133 aa3.43□□□□□ -1.86
CCDC90B-204ENST00000525504 CBLN2Q8IUK8 224 aa3.43□□□□□ -1.86
CCDC90B-204ENST00000525504 LINC00304Q8N9R0 145 aa3.43□□□□□ -1.86
CCDC90B-204ENST00000525504 KCNQ1DNQ9H478 68 aa3.43□□□□□ -1.86
CCDC90B-204ENST00000525504 SMIM13P0DJ93 91 aa3.42□□□□□ -1.86
CCDC90B-204ENST00000525504 BOD1L2Q8IYS8 172 aa3.42□□□□□ -1.86
CCDC90B-204ENST00000525504 LINC00518Q8N0U6 118 aa3.42□□□□□ -1.86
CCDC90B-204ENST00000525504 FAM19A2Q8N3H0 131 aa3.42□□□□□ -1.86
CCDC90B-204ENST00000525504 LINC00337Q8N6G1 96 aa3.42□□□□□ -1.86
CCDC90B-204ENST00000525504 SPRR4Q96PI1 79 aa3.42□□□□□ -1.86
CCDC90B-204ENST00000525504 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
CCDC90B-204ENST00000525504 MYMXA0A1B0GTQ4 84 aa3.41□□□□□ -1.86
CCDC90B-204ENST00000525504 HSBP1O75506 76 aa3.41□□□□□ -1.86
CCDC90B-204ENST00000525504 TRGC2P03986 189 aa3.41□□□□□ -1.86
CCDC90B-204ENST00000525504 SPAG11AQ6PDA7 123 aa3.41□□□□□ -1.86
CCDC90B-204ENST00000525504 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
CCDC90B-204ENST00000525504 MIR7-3HGQ8N6C7 128 aa3.41□□□□□ -1.86
CCDC90B-204ENST00000525504 NDUFA12Q9UI09 145 aa3.41□□□□□ -1.86
CCDC90B-204ENST00000525504 PAM16Q9Y3D7 125 aa3.41□□□□□ -1.86
CCDC90B-204ENST00000525504 TRBV10-2A0A0K0K1G8 114 aa3.4□□□□□ -1.87
CCDC90B-204ENST00000525504 COLCA2A8K830 154 aa3.4□□□□□ -1.87
CCDC90B-204ENST00000525504 LEPROTO15243 131 aa3.4□□□□□ -1.87
CCDC90B-204ENST00000525504 TSPEAR-AS2P59090 65 aa3.4□□□□□ -1.87
CCDC90B-204ENST00000525504 TPRXLQ17RH7 258 aa3.4□□□□□ -1.87
CCDC90B-204ENST00000525504 LINC00483Q53H64 154 aa3.4□□□□□ -1.87
CCDC90B-204ENST00000525504 C3orf22Q8N5N4 141 aa3.4□□□□□ -1.87
CCDC90B-204ENST00000525504 IGLV7-46A0A075B6I9 117 aa3.39□□□□□ -1.87
CCDC90B-204ENST00000525504 TRBV10-3A0A0K0K1G6 114 aa3.39□□□□□ -1.87
CCDC90B-204ENST00000525504 SERF1AO75920 110 aa3.39□□□□□ -1.87
CCDC90B-204ENST00000525504 LEPROTL1O95214 131 aa3.39□□□□□ -1.87
CCDC90B-204ENST00000525504 PLNP26678 52 aa3.39□□□□□ -1.87
CCDC90B-204ENST00000525504 SMCR5Q8TEV8 140 aa3.39□□□□□ -1.87
CCDC90B-204ENST00000525504 HIGD2AQ9BW72 106 aa3.39□□□□□ -1.87
CCDC90B-204ENST00000525504 HSPB8Q9UJY1 196 aa3.39□□□□□ -1.87
CCDC90B-204ENST00000525504 ZNF706Q9Y5V0 76 aaPredicted RBP3.39□□□□□ -1.87
CCDC90B-204ENST00000525504 J3QQQ9 107 aa3.38□□□□□ -1.87
CCDC90B-204ENST00000525504 NDUFC2O95298 119 aa3.38□□□□□ -1.87
CCDC90B-204ENST00000525504 IGLV6-57P01721 117 aa3.38□□□□□ -1.87
CCDC90B-204ENST00000525504 NMUP48645 174 aa3.38□□□□□ -1.87
CCDC90B-204ENST00000525504 MEIG1Q5JSS6 88 aa3.38□□□□□ -1.87
CCDC90B-204ENST00000525504 FP248Q71RG6 208 aaPredicted RBP3.38□□□□□ -1.87
CCDC90B-204ENST00000525504 ERC2-IT1O76042 136 aa3.37□□□□□ -1.87
CCDC90B-204ENST00000525504 DPM2O94777 84 aa3.37□□□□□ -1.87
CCDC90B-204ENST00000525504 SPINK1P00995 79 aa3.37□□□□□ -1.87
CCDC90B-204ENST00000525504 SSBP3-AS1Q7Z2R9 100 aa3.37□□□□□ -1.87
CCDC90B-204ENST00000525504 RETNLBQ9BQ08 111 aa3.37□□□□□ -1.87
CCDC90B-204ENST00000525504 PPDPFQ9H3Y8 114 aa3.37□□□□□ -1.87
CCDC90B-204ENST00000525504 V9GYY9 64 aa3.37□□□□□ -1.87
CCDC90B-204ENST00000525504 A0A0U1RQV1 116 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 LOC105371267A0A1B0GV96 52 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 ETDCA0A1B0GVM5 59 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 E9PLD3 99 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 NCR3O14931 201 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 IGKCP01834 107 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 FABP4P15090 132 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 DDTP30046 118 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 HERVK_113P61574 105 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 RPS29P62273 56 aaKnown RBP3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 ADAMTSL4-AS1Q5T5F5 129 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 SOSTDC1Q6X4U4 206 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 DAND5Q8N907 189 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 Q8NBF4 154 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 Q9BRP9 147 aa3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 SPANXB1Q9NS25 103 aaPredicted RBP3.36□□□□□ -1.87
CCDC90B-204ENST00000525504 A0A0J9YXY3 114 aa3.35□□□□□ -1.87
CCDC90B-204ENST00000525504 S100A12P80511 92 aa3.35□□□□□ -1.87
CCDC90B-204ENST00000525504 KRTAP13-3Q3SY46 172 aa3.35□□□□□ -1.87
CCDC90B-204ENST00000525504 Q6ZRX8 168 aa3.35□□□□□ -1.87
CCDC90B-204ENST00000525504 PMCHL2Q9BQD1 86 aa3.35□□□□□ -1.87
CCDC90B-204ENST00000525504 IGKV2D-30A0A075B6S6 120 aa3.34□□□□□ -1.87
CCDC90B-204ENST00000525504 SYS1-DBNDD2H3BUS1 97 aa3.34□□□□□ -1.87
CCDC90B-204ENST00000525504 TIMM17BO60830 172 aa3.34□□□□□ -1.87
CCDC90B-204ENST00000525504 LGALS3P17931 250 aaKnown RBP3.34□□□□□ -1.87
CCDC90B-204ENST00000525504 LITAFQ99732 161 aa3.34□□□□□ -1.87
CCDC90B-204ENST00000525504 ZNF73O43830 326 aaPredicted RBP3.33□□□□□ -1.88
CCDC90B-204ENST00000525504 MT3P25713 68 aa3.33□□□□□ -1.88
CCDC90B-204ENST00000525504 ASB16-AS1Q495Z4 193 aa3.33□□□□□ -1.88
CCDC90B-204ENST00000525504 COA6Q5JTJ3 125 aaKnown RBP3.33□□□□□ -1.88
CCDC90B-204ENST00000525504 S100A7L2Q5SY68 101 aa3.33□□□□□ -1.88
CCDC90B-204ENST00000525504 LINC01545Q5VT33 79 aa3.33□□□□□ -1.88
CCDC90B-204ENST00000525504 Q6ZVQ6 151 aa3.33□□□□□ -1.88
CCDC90B-204ENST00000525504 MIEN1Q9BRT3 115 aa3.33□□□□□ -1.88
CCDC90B-204ENST00000525504 TRAV23DV6A0A075B6W5 121 aa3.32□□□□□ -1.88
CCDC90B-204ENST00000525504 SLC25A20O43772 301 aa3.32□□□□□ -1.88
CCDC90B-204ENST00000525504 HIST1H2BKO60814 126 aa3.32□□□□□ -1.88
CCDC90B-204ENST00000525504 HIST1H2BJP06899 126 aa3.32□□□□□ -1.88
CCDC90B-204ENST00000525504 SPRR1BP22528 89 aa3.32□□□□□ -1.88
CCDC90B-204ENST00000525504 HIST1H2BOP23527 126 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms