RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 SPANXB1Q9NS25 103 aaPredicted RBP3.96□□□□□ -1.78
CD44-214ENST00000525211 SRRM2Q9UQ35 2752 aaKnown RBP3.96□□□□□ -1.78
CD44-214ENST00000525211 MYCBP2O75592 4640 aa3.95□□□□□ -1.78
CD44-214ENST00000525211 A4D1N5 150 aa3.95□□□□□ -1.78
CD44-214ENST00000525211 LINC00587B1AMM8 73 aa3.95□□□□□ -1.78
CD44-214ENST00000525211 SMIM6P0DI80 62 aa3.95□□□□□ -1.78
CD44-214ENST00000525211 FXYD2P54710 66 aa3.95□□□□□ -1.78
CD44-214ENST00000525211 UBE2BP63146 152 aa3.95□□□□□ -1.78
CD44-214ENST00000525211 SRSF9Q13242 221 aaKnown RBP eCLIP3.95□□□□□ -1.78
CD44-214ENST00000525211 LINC00518Q8N0U6 118 aa3.95□□□□□ -1.78
CD44-214ENST00000525211 NKAPP1Q8N9T2 125 aa3.95□□□□□ -1.78
CD44-214ENST00000525211 PKIGQ9Y2B9 76 aa3.95□□□□□ -1.78
CD44-214ENST00000525211 KRTAP4-16G5E9R7 235 aaPredicted RBP3.94□□□□□ -1.78
CD44-214ENST00000525211 NDUFC2O95298 119 aa3.94□□□□□ -1.78
CD44-214ENST00000525211 IGLV6-57P01721 117 aa3.94□□□□□ -1.78
CD44-214ENST00000525211 RPL24P83731 157 aaKnown RBP3.94□□□□□ -1.78
CD44-214ENST00000525211 C1orf137Q5JT78 98 aa3.94□□□□□ -1.78
CD44-214ENST00000525211 KRTAP13-1Q8IUC0 172 aa3.94□□□□□ -1.78
CD44-214ENST00000525211 HIGD1BQ9P298 99 aa3.94□□□□□ -1.78
CD44-214ENST00000525211 IGLV7-43P04211 117 aa3.93□□□□□ -1.78
CD44-214ENST00000525211 CFC1BP0CG36 223 aa3.93□□□□□ -1.78
CD44-214ENST00000525211 CFC1P0CG37 223 aa3.93□□□□□ -1.78
CD44-214ENST00000525211 IFITM1P13164 125 aa3.93□□□□□ -1.78
CD44-214ENST00000525211 LBHQ53QV2 105 aaPredicted RBP3.93□□□□□ -1.78
CD44-214ENST00000525211 HIST1H4GQ99525 98 aa3.93□□□□□ -1.78
CD44-214ENST00000525211 TMEM126AQ9H061 195 aa3.93□□□□□ -1.78
CD44-214ENST00000525211 TNXBP22105 4242 aa3.92□□□□□ -1.78
CD44-214ENST00000525211 TRBV10-2A0A0K0K1G8 114 aa3.92□□□□□ -1.78
CD44-214ENST00000525211 ERC2-IT1O76042 136 aa3.92□□□□□ -1.78
CD44-214ENST00000525211 DDTP30046 118 aa3.92□□□□□ -1.78
CD44-214ENST00000525211 SPRR1AP35321 89 aa3.92□□□□□ -1.78
CD44-214ENST00000525211 S100A12P80511 92 aa3.92□□□□□ -1.78
CD44-214ENST00000525211 PRLHP81277 87 aa3.92□□□□□ -1.78
CD44-214ENST00000525211 CEND1Q8N111 149 aa3.92□□□□□ -1.78
CD44-214ENST00000525211 MIEN1Q9BRT3 115 aa3.92□□□□□ -1.78
CD44-214ENST00000525211 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
CD44-214ENST00000525211 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
CD44-214ENST00000525211 KCNQ1DNQ9H478 68 aa3.92□□□□□ -1.78
CD44-214ENST00000525211 UQCR10Q9UDW1 63 aa3.92□□□□□ -1.78
CD44-214ENST00000525211 K7ERJ3 54 aa3.91□□□□□ -1.78
CD44-214ENST00000525211 BCE1O60756 84 aa3.91□□□□□ -1.78
CD44-214ENST00000525211 CTAG1AP78358 180 aa3.91□□□□□ -1.78
CD44-214ENST00000525211 REG3GQ6UW15 175 aa3.91□□□□□ -1.78
CD44-214ENST00000525211 Q6ZVH6 145 aa3.91□□□□□ -1.78
CD44-214ENST00000525211 OR13C6PQ8NH95 151 aa3.91□□□□□ -1.78
CD44-214ENST00000525211 PPDPFQ9H3Y8 114 aa3.91□□□□□ -1.78
CD44-214ENST00000525211 ANAPC11Q9NYG5 84 aa3.91□□□□□ -1.78
CD44-214ENST00000525211 INAFM2P0DMQ5 153 aa3.9□□□□□ -1.79
CD44-214ENST00000525211 BVES-AS1Q5T3Y7 98 aa3.9□□□□□ -1.79
CD44-214ENST00000525211 FAM19A1Q7Z5A9 133 aa3.9□□□□□ -1.79
CD44-214ENST00000525211 SMIM11BQ8TCY0 68 aa3.9□□□□□ -1.79
CD44-214ENST00000525211 SMCR5Q8TEV8 140 aa3.9□□□□□ -1.79
CD44-214ENST00000525211 Q9BRP9 147 aa3.9□□□□□ -1.79
CD44-214ENST00000525211 TRAV23DV6A0A075B6W5 121 aa3.89□□□□□ -1.79
CD44-214ENST00000525211 A6NDN8 102 aa3.89□□□□□ -1.79
CD44-214ENST00000525211 ZNF861PO60384 105 aa3.89□□□□□ -1.79
CD44-214ENST00000525211 KRTAP1-4P0C5Y4 121 aa3.89□□□□□ -1.79
CD44-214ENST00000525211 RPL13AP40429 203 aaKnown RBP3.89□□□□□ -1.79
CD44-214ENST00000525211 HINT1P49773 126 aaPredicted RBP3.89□□□□□ -1.79
CD44-214ENST00000525211 HSD52Q0P140 79 aa3.89□□□□□ -1.79
CD44-214ENST00000525211 TAL2Q16559 108 aa3.89□□□□□ -1.79
CD44-214ENST00000525211 S100A7L2Q5SY68 101 aa3.89□□□□□ -1.79
CD44-214ENST00000525211 H7C2G1 150 aa3.88□□□□□ -1.79
CD44-214ENST00000525211 MT1HL1P0DM35 61 aa3.88□□□□□ -1.79
CD44-214ENST00000525211 C6orf99Q4VX62 202 aa3.88□□□□□ -1.79
CD44-214ENST00000525211 A0A0B4J2C4 111 aa3.87□□□□□ -1.79
CD44-214ENST00000525211 A0A1B0GWB2 263 aa3.87□□□□□ -1.79
CD44-214ENST00000525211 H0Y9J4 135 aa3.87□□□□□ -1.79
CD44-214ENST00000525211 ZNF73O43830 326 aaPredicted RBP3.87□□□□□ -1.79
CD44-214ENST00000525211 UBE2AP49459 152 aa3.87□□□□□ -1.79
CD44-214ENST00000525211 ST20-AS1Q8NBB2 130 aa3.87□□□□□ -1.79
CD44-214ENST00000525211 NHP2Q9NX24 153 aaKnown RBP3.87□□□□□ -1.79
CD44-214ENST00000525211 TRAV13-2A0A0B4J235 113 aa3.86□□□□□ -1.79
CD44-214ENST00000525211 ETDCA0A1B0GVM5 59 aa3.86□□□□□ -1.79
CD44-214ENST00000525211 SPINK6Q6UWN8 80 aa3.86□□□□□ -1.79
CD44-214ENST00000525211 FAM218AQ96MZ4 157 aa3.86□□□□□ -1.79
CD44-214ENST00000525211 NAA38Q9BRA0 125 aaKnown RBP3.86□□□□□ -1.79
CD44-214ENST00000525211 HIGD2AQ9BW72 106 aa3.86□□□□□ -1.79
CD44-214ENST00000525211 A0A087X002 238 aa3.85□□□□□ -1.79
CD44-214ENST00000525211 TSPAN13O95857 204 aa3.85□□□□□ -1.79
CD44-214ENST00000525211 RPL28P46779 137 aaKnown RBP3.85□□□□□ -1.79
CD44-214ENST00000525211 ELOF1P60002 83 aaKnown RBP3.85□□□□□ -1.79
CD44-214ENST00000525211 KRTAP13-2Q52LG2 175 aa3.85□□□□□ -1.79
CD44-214ENST00000525211 Q6ZRX8 168 aa3.85□□□□□ -1.79
CD44-214ENST00000525211 PRR26Q8N8Z3 221 aa3.85□□□□□ -1.79
CD44-214ENST00000525211 DIRC1Q969H9 104 aa3.85□□□□□ -1.79
CD44-214ENST00000525211 KRTAP9-3Q9BYQ3 159 aa3.85□□□□□ -1.79
CD44-214ENST00000525211 TSTD3H0UI37 97 aa3.84□□□□□ -1.79
CD44-214ENST00000525211 COX7BP24311 80 aa3.84□□□□□ -1.79
CD44-214ENST00000525211 LINC01547P58512 204 aaPredicted RBP3.84□□□□□ -1.79
CD44-214ENST00000525211 COPS9Q8WXC6 57 aa3.84□□□□□ -1.79
CD44-214ENST00000525211 RAB37Q96AX2 223 aa3.84□□□□□ -1.79
CD44-214ENST00000525211 PRO1854Q9UHT4 67 aa3.84□□□□□ -1.79
CD44-214ENST00000525211 A0A0A0MQY5 61 aa3.83□□□□□ -1.8
CD44-214ENST00000525211 PCP4L1A6NKN8 68 aa3.83□□□□□ -1.8
CD44-214ENST00000525211 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
CD44-214ENST00000525211 BATFQ16520 125 aa3.83□□□□□ -1.8
CD44-214ENST00000525211 C3orf22Q8N5N4 141 aa3.83□□□□□ -1.8
CD44-214ENST00000525211 LINC01600Q96MT4 127 aa3.83□□□□□ -1.8
CD44-214ENST00000525211 SPRR4Q96PI1 79 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms