RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 SPRR1AP35321 89 aa3.25□□□□□ -1.89
HMGB1P40-201ENST00000525121 KRTAP13-1Q8IUC0 172 aa3.25□□□□□ -1.89
HMGB1P40-201ENST00000525121 PRR26Q8N8Z3 221 aa3.25□□□□□ -1.89
HMGB1P40-201ENST00000525121 PPDPFQ9H3Y8 114 aa3.25□□□□□ -1.89
HMGB1P40-201ENST00000525121 PCLOQ9Y6V0 5065 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 TRAV13-2A0A0B4J235 113 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 EIF4EBP3O60516 100 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 KRTAP1-4P0C5Y4 121 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 COX8AP10176 69 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 KRTAP10-8P60410 259 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 FAM229BQ4G0N7 80 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 SPATA45Q537H7 98 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 Q6ZRX8 168 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 MUSTN1Q8IVN3 82 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 TYMSOSQ8TAI1 123 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 HIST1H4GQ99525 98 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 KRTAP3-3Q9BYR6 98 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 KRTAP3-2Q9BYR7 98 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 PAM16Q9Y3D7 125 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 VPS13BQ7Z7G8 4022 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 ABCA13Q86UQ4 5058 aa3.24□□□□□ -1.89
HMGB1P40-201ENST00000525121 B5MCH6 92 aa3.23□□□□□ -1.89
HMGB1P40-201ENST00000525121 DLEU1O43261 78 aa3.23□□□□□ -1.89
HMGB1P40-201ENST00000525121 SLC25A34Q6PIV7 304 aa3.23□□□□□ -1.89
HMGB1P40-201ENST00000525121 KRTAP4-16G5E9R7 235 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P40-201ENST00000525121 COX7BP24311 80 aa3.22□□□□□ -1.89
HMGB1P40-201ENST00000525121 SMCR5Q8TEV8 140 aa3.22□□□□□ -1.89
HMGB1P40-201ENST00000525121 C14orf144Q96I85 54 aa3.22□□□□□ -1.89
HMGB1P40-201ENST00000525121 SPRR4Q96PI1 79 aa3.22□□□□□ -1.89
HMGB1P40-201ENST00000525121 DHRS4-AS1Q9P1J3 65 aa3.22□□□□□ -1.89
HMGB1P40-201ENST00000525121 A0A087X002 238 aa3.21□□□□□ -1.9
HMGB1P40-201ENST00000525121 A0A1B0GWB2 263 aa3.21□□□□□ -1.9
HMGB1P40-201ENST00000525121 VAMP3Q15836 100 aa3.21□□□□□ -1.9
HMGB1P40-201ENST00000525121 C6orf99Q4VX62 202 aa3.21□□□□□ -1.9
HMGB1P40-201ENST00000525121 GAGE2AQ6NT46 116 aa3.21□□□□□ -1.9
HMGB1P40-201ENST00000525121 NHP2Q9NX24 153 aaKnown RBP3.21□□□□□ -1.9
HMGB1P40-201ENST00000525121 ANAPC11Q9NYG5 84 aa3.21□□□□□ -1.9
HMGB1P40-201ENST00000525121 TRBV7-6A0A0J9YX20 115 aa3.2□□□□□ -1.9
HMGB1P40-201ENST00000525121 A4D1N5 150 aa3.2□□□□□ -1.9
HMGB1P40-201ENST00000525121 SLC25A20O43772 301 aa3.2□□□□□ -1.9
HMGB1P40-201ENST00000525121 ELOF1P60002 83 aaKnown RBP3.2□□□□□ -1.9
HMGB1P40-201ENST00000525121 PYY3Q5JQD4 70 aa3.2□□□□□ -1.9
HMGB1P40-201ENST00000525121 LINC00304Q8N9R0 145 aa3.2□□□□□ -1.9
HMGB1P40-201ENST00000525121 RAB37Q96AX2 223 aa3.2□□□□□ -1.9
HMGB1P40-201ENST00000525121 Q9BRP9 147 aa3.2□□□□□ -1.9
HMGB1P40-201ENST00000525121 HIGD1BQ9P298 99 aa3.2□□□□□ -1.9
HMGB1P40-201ENST00000525121 MYCBP2O75592 4640 aa3.2□□□□□ -1.9
HMGB1P40-201ENST00000525121 SNCGO76070 127 aa3.19□□□□□ -1.9
HMGB1P40-201ENST00000525121 TAL2Q16559 108 aa3.19□□□□□ -1.9
HMGB1P40-201ENST00000525121 LINC00483Q53H64 154 aa3.19□□□□□ -1.9
HMGB1P40-201ENST00000525121 SMIM11BQ8TCY0 68 aa3.19□□□□□ -1.9
HMGB1P40-201ENST00000525121 C12orf57Q99622 126 aa3.19□□□□□ -1.9
HMGB1P40-201ENST00000525121 IGLV9-49A0A0B4J1Y8 123 aa3.18□□□□□ -1.9
HMGB1P40-201ENST00000525121 ERC2-IT1O76042 136 aa3.18□□□□□ -1.9
HMGB1P40-201ENST00000525121 TSPAN13O95857 204 aa3.18□□□□□ -1.9
HMGB1P40-201ENST00000525121 Q1RN00 199 aa3.18□□□□□ -1.9
HMGB1P40-201ENST00000525121 KRTAP13-2Q52LG2 175 aa3.18□□□□□ -1.9
HMGB1P40-201ENST00000525121 BVES-AS1Q5T3Y7 98 aa3.18□□□□□ -1.9
HMGB1P40-201ENST00000525121 C9orf153Q5TBE3 101 aa3.18□□□□□ -1.9
HMGB1P40-201ENST00000525121 SPAG11AQ6PDA7 123 aa3.18□□□□□ -1.9
HMGB1P40-201ENST00000525121 UQCR10Q9UDW1 63 aa3.18□□□□□ -1.9
HMGB1P40-201ENST00000525121 LAMTOR3Q9UHA4 124 aa3.18□□□□□ -1.9
HMGB1P40-201ENST00000525121 A0A0B4J2C4 111 aa3.17□□□□□ -1.9
HMGB1P40-201ENST00000525121 LOC105371267A0A1B0GV96 52 aa3.17□□□□□ -1.9
HMGB1P40-201ENST00000525121 H7C2G1 150 aa3.17□□□□□ -1.9
HMGB1P40-201ENST00000525121 HSD52Q0P140 79 aa3.17□□□□□ -1.9
HMGB1P40-201ENST00000525121 MOBPQ13875 183 aa3.17□□□□□ -1.9
HMGB1P40-201ENST00000525121 C2orf91Q6ZV80 131 aa3.17□□□□□ -1.9
HMGB1P40-201ENST00000525121 CEND1Q8N111 149 aa3.17□□□□□ -1.9
HMGB1P40-201ENST00000525121 C3orf22Q8N5N4 141 aa3.17□□□□□ -1.9
HMGB1P40-201ENST00000525121 ST20-AS1Q8NBB2 130 aa3.17□□□□□ -1.9
HMGB1P40-201ENST00000525121 Q8NBF4 154 aa3.17□□□□□ -1.9
HMGB1P40-201ENST00000525121 DEFB105AQ8NG35 78 aa3.17□□□□□ -1.9
HMGB1P40-201ENST00000525121 TEX49A0A1B0GTD5 131 aa3.16□□□□□ -1.9
HMGB1P40-201ENST00000525121 F8WEM9 126 aa3.16□□□□□ -1.9
HMGB1P40-201ENST00000525121 PRR4Q16378 134 aa3.16□□□□□ -1.9
HMGB1P40-201ENST00000525121 SSBP3-AS1Q7Z2R9 100 aa3.16□□□□□ -1.9
HMGB1P40-201ENST00000525121 PKHD1L1Q86WI1 4243 aa3.16□□□□□ -1.9
HMGB1P40-201ENST00000525121 hADV29S1A0JD25 119 aa3.15□□□□□ -1.91
HMGB1P40-201ENST00000525121 SPINK1P00995 79 aa3.15□□□□□ -1.91
HMGB1P40-201ENST00000525121 CFC1BP0CG36 223 aa3.15□□□□□ -1.91
HMGB1P40-201ENST00000525121 CFC1P0CG37 223 aa3.15□□□□□ -1.91
HMGB1P40-201ENST00000525121 SMIM6P0DI80 62 aa3.15□□□□□ -1.91
HMGB1P40-201ENST00000525121 SPRR1BP22528 89 aa3.15□□□□□ -1.91
HMGB1P40-201ENST00000525121 PRO1854Q9UHT4 67 aa3.15□□□□□ -1.91
HMGB1P40-201ENST00000525121 H0YGX0 51 aa3.14□□□□□ -1.91
HMGB1P40-201ENST00000525121 GHRHP01286 108 aa3.14□□□□□ -1.91
HMGB1P40-201ENST00000525121 LINC00575Q6W349 94 aa3.14□□□□□ -1.91
HMGB1P40-201ENST00000525121 LRP1Q07954 4544 aaKnown RBP3.14□□□□□ -1.91
HMGB1P40-201ENST00000525121 IGLV5-48A0A075B6I7 105 aa3.13□□□□□ -1.91
HMGB1P40-201ENST00000525121 M0R143 59 aa3.13□□□□□ -1.91
HMGB1P40-201ENST00000525121 COX6CP09669 75 aa3.13□□□□□ -1.91
HMGB1P40-201ENST00000525121 PSMB2P49721 201 aa3.13□□□□□ -1.91
HMGB1P40-201ENST00000525121 FXYD2P54710 66 aa3.13□□□□□ -1.91
HMGB1P40-201ENST00000525121 RPS29P62273 56 aaKnown RBP3.13□□□□□ -1.91
HMGB1P40-201ENST00000525121 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P40-201ENST00000525121 Q6ZQY7 126 aa3.13□□□□□ -1.91
HMGB1P40-201ENST00000525121 LIMD2Q9BT23 127 aa3.13□□□□□ -1.91
HMGB1P40-201ENST00000525121 PRO1933Q9H354 126 aa3.13□□□□□ -1.91
HMGB1P40-201ENST00000525121 TSTD3H0UI37 97 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms