RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 H0Y9P7 68 aa2.07□□□□□ -2.08
USP47-204ENST00000525078 WT1-ASQ06250 92 aa2.07□□□□□ -2.08
USP47-204ENST00000525078 ATXN8Q156A1 80 aa2.07□□□□□ -2.08
USP47-204ENST00000525078 DEFB133Q30KQ1 61 aa2.07□□□□□ -2.08
USP47-204ENST00000525078 HIVEP2P31629 2446 aa2.07□□□□□ -2.08
USP47-204ENST00000525078 K7EIL1 84 aa2.06□□□□□ -2.08
USP47-204ENST00000525078 CRIP1P50238 77 aa2.06□□□□□ -2.08
USP47-204ENST00000525078 KLK9Q2XQG4 91 aa2.06□□□□□ -2.08
USP47-204ENST00000525078 SMIM2Q9BVW6 85 aa2.06□□□□□ -2.08
USP47-204ENST00000525078 ZDBF2Q9HCK1 2354 aa2.06□□□□□ -2.08
USP47-204ENST00000525078 HTTP42858 3142 aa2.05□□□□□ -2.08
USP47-204ENST00000525078 GOLGB1Q14789 3259 aaKnown RBP2.05□□□□□ -2.08
USP47-204ENST00000525078 DEFB108AA8MXU0 73 aa2.05□□□□□ -2.08
USP47-204ENST00000525078 I3L2K1 104 aa2.05□□□□□ -2.08
USP47-204ENST00000525078 U3KQA8 63 aa2.05□□□□□ -2.08
USP47-204ENST00000525078 FBN1P35555 2871 aaKnown RBP2.04□□□□□ -2.08
USP47-204ENST00000525078 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
USP47-204ENST00000525078 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
USP47-204ENST00000525078 CNTRLQ7Z7A1 2325 aa2.04□□□□□ -2.08
USP47-204ENST00000525078 UBE2DNLQ8IWF7 75 aa2.04□□□□□ -2.08
USP47-204ENST00000525078 SORL1Q92673 2214 aa2.04□□□□□ -2.08
USP47-204ENST00000525078 GAFA1Q96PS6 74 aa2.04□□□□□ -2.08
USP47-204ENST00000525078 KAAG1Q9UBP8 84 aa2.04□□□□□ -2.08
USP47-204ENST00000525078 TNCP24821 2201 aa2.03□□□□□ -2.08
USP47-204ENST00000525078 K7EIM0 57 aa2.03□□□□□ -2.08
USP47-204ENST00000525078 UBE2D4Q9Y2X8 147 aa2.03□□□□□ -2.08
USP47-204ENST00000525078 CACNA1EQ15878 2313 aa2.03□□□□□ -2.08
USP47-204ENST00000525078 CEP350Q5VT06 3117 aa2.03□□□□□ -2.08
USP47-204ENST00000525078 ZFHX3Q15911 3703 aa2.02□□□□□ -2.09
USP47-204ENST00000525078 IGIPA6NJ69 53 aa2.02□□□□□ -2.09
USP47-204ENST00000525078 NDUFA3O95167 84 aa2.02□□□□□ -2.09
USP47-204ENST00000525078 ATP5EP2Q5VTU8 51 aa2.02□□□□□ -2.09
USP47-204ENST00000525078 SPATA8Q6RVD6 105 aa2.02□□□□□ -2.09
USP47-204ENST00000525078 TIMM8BQ9Y5J9 83 aaPredicted RBP2.02□□□□□ -2.09
USP47-204ENST00000525078 NAV3Q8IVL0 2385 aa2.02□□□□□ -2.09
USP47-204ENST00000525078 PDE4DIPQ5VU43 2346 aa2.02□□□□□ -2.09
USP47-204ENST00000525078 DNAJC13O75165 2243 aa2.02□□□□□ -2.09
USP47-204ENST00000525078 KNTC1P50748 2209 aa2.02□□□□□ -2.09
USP47-204ENST00000525078 ASXL3Q9C0F0 2248 aa2.01□□□□□ -2.09
USP47-204ENST00000525078 H3BVH4 76 aa2.01□□□□□ -2.09
USP47-204ENST00000525078 POLR2KP53803 58 aaKnown RBP2.01□□□□□ -2.09
USP47-204ENST00000525078 SPINK7P58062 85 aa2.01□□□□□ -2.09
USP47-204ENST00000525078 TRANK1O15050 2925 aa2.01□□□□□ -2.09
USP47-204ENST00000525078 RP1L1Q8IWN7 2480 aaPredicted RBP2□□□□□ -2.09
USP47-204ENST00000525078 TRAV21A0A0B4J279 112 aa2□□□□□ -2.09
USP47-204ENST00000525078 LEAP2Q969E1 77 aa2□□□□□ -2.09
USP47-204ENST00000525078 PLAC8Q9NZF1 115 aa1.99□□□□□ -2.09
USP47-204ENST00000525078 M0R1W7 72 aa1.98□□□□□ -2.09
USP47-204ENST00000525078 NDUFA1O15239 70 aa1.98□□□□□ -2.09
USP47-204ENST00000525078 SSBP3-AS1Q7Z2R9 100 aa1.98□□□□□ -2.09
USP47-204ENST00000525078 CHD9Q3L8U1 2897 aa1.98□□□□□ -2.09
USP47-204ENST00000525078 CHD7Q9P2D1 2997 aa1.98□□□□□ -2.09
USP47-204ENST00000525078 A0A1B0GU69 56 aa1.97□□□□□ -2.09
USP47-204ENST00000525078 I3L3M4 83 aa1.97□□□□□ -2.09
USP47-204ENST00000525078 MINOS1Q5TGZ0 78 aa1.97□□□□□ -2.09
USP47-204ENST00000525078 H0YGX0 51 aa1.96□□□□□ -2.1
USP47-204ENST00000525078 H3BUA1 57 aa1.96□□□□□ -2.1
USP47-204ENST00000525078 KRTAP21-3Q3LHN1 58 aa1.96□□□□□ -2.1
USP47-204ENST00000525078 RPL39LQ96EH5 51 aaKnown RBP1.96□□□□□ -2.1
USP47-204ENST00000525078 UNC80Q8N2C7 3258 aa1.95□□□□□ -2.1
USP47-204ENST00000525078 M0QY20 66 aa1.95□□□□□ -2.1
USP47-204ENST00000525078 NDUFA4O00483 81 aa1.95□□□□□ -2.1
USP47-204ENST00000525078 RPL39P62891 51 aaKnown RBP1.95□□□□□ -2.1
USP47-204ENST00000525078 DEFB108BQ8NET1 73 aa1.95□□□□□ -2.1
USP47-204ENST00000525078 CADP27708 2225 aa1.95□□□□□ -2.1
USP47-204ENST00000525078 BRCA2P51587 3418 aa1.94□□□□□ -2.1
USP47-204ENST00000525078 KNL1Q8NG31 2342 aa1.94□□□□□ -2.1
USP47-204ENST00000525078 A8MTW9 85 aa1.94□□□□□ -2.1
USP47-204ENST00000525078 LINC00308Q8TCZ7 52 aa1.94□□□□□ -2.1
USP47-204ENST00000525078 UTRNP46939 3433 aa1.94□□□□□ -2.1
USP47-204ENST00000525078 USMG5Q96IX5 58 aa1.93□□□□□ -2.1
USP47-204ENST00000525078 APELAP0DMC3 54 aa1.92□□□□□ -2.1
USP47-204ENST00000525078 PLCE1Q9P212 2302 aa1.91□□□□□ -2.1
USP47-204ENST00000525078 RANBP2P49792 3224 aaKnown RBP1.91□□□□□ -2.1
USP47-204ENST00000525078 DEFB114Q30KQ6 69 aa1.91□□□□□ -2.1
USP47-204ENST00000525078 DEFB112Q30KQ8 113 aa1.91□□□□□ -2.1
USP47-204ENST00000525078 UBL5Q9BZL1 73 aa1.91□□□□□ -2.1
USP47-204ENST00000525078 ROS1P08922 2347 aa1.9□□□□□ -2.1
USP47-204ENST00000525078 TRBV7-4A0A0J9YYF1 115 aa1.9□□□□□ -2.11
USP47-204ENST00000525078 CDKN2A-AS1Q9UH64 79 aa1.9□□□□□ -2.11
USP47-204ENST00000525078 COL6A6A6NMZ7 2263 aa1.9□□□□□ -2.11
USP47-204ENST00000525078 C5orf42Q9H799 3197 aa1.9□□□□□ -2.11
USP47-204ENST00000525078 KMT2BQ9UMN6 2715 aaPredicted RBP1.89□□□□□ -2.11
USP47-204ENST00000525078 NDUFB1O75438 58 aa1.89□□□□□ -2.11
USP47-204ENST00000525078 WDR87Q6ZQQ6 2873 aa1.89□□□□□ -2.11
USP47-204ENST00000525078 REV3LO60673 3130 aa1.89□□□□□ -2.11
USP47-204ENST00000525078 MKI67P46013 3256 aaKnown RBP1.88□□□□□ -2.11
USP47-204ENST00000525078 LCE6AA0A183 80 aa1.88□□□□□ -2.11
USP47-204ENST00000525078 WFDC9Q8NEX5 89 aa1.88□□□□□ -2.11
USP47-204ENST00000525078 RHPN1-AS1Q9BWJ2 59 aa1.88□□□□□ -2.11
USP47-204ENST00000525078 SZT2Q5T011 3432 aa1.88□□□□□ -2.11
USP47-204ENST00000525078 FAM186AA6NE01 2351 aa1.88□□□□□ -2.11
USP47-204ENST00000525078 Q8IZM0 81 aa1.87□□□□□ -2.11
USP47-204ENST00000525078 DNAH14Q0VDD8 3507 aa1.87□□□□□ -2.11
USP47-204ENST00000525078 LINC00959A0A1B0GUT2 108 aa1.86□□□□□ -2.11
USP47-204ENST00000525078 COX6A2Q02221 97 aa1.86□□□□□ -2.11
USP47-204ENST00000525078 ENHOQ6UWT2 76 aa1.86□□□□□ -2.11
USP47-204ENST00000525078 URB1O60287 2271 aaKnown RBP1.86□□□□□ -2.11
USP47-204ENST00000525078 AHCTF1Q8WYP5 2266 aa1.86□□□□□ -2.11
USP47-204ENST00000525078 JMJD1CQ15652 2540 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms