RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 TRAV23DV6A0A075B6W5 121 aa10.65□□□□□ -0.7
CAPN1-203ENST00000525013 LINC00483Q53H64 154 aa10.65□□□□□ -0.7
CAPN1-203ENST00000525013 Q9BRP9 147 aa10.65□□□□□ -0.7
CAPN1-203ENST00000525013 C3orf79P0CE67 100 aa10.64□□□□□ -0.71
CAPN1-203ENST00000525013 ZNF815PA8K554 130 aa10.63□□□□□ -0.71
CAPN1-203ENST00000525013 ZNF73O43830 326 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-203ENST00000525013 KRTDAPP60985 99 aa10.63□□□□□ -0.71
CAPN1-203ENST00000525013 JOSD1Q15040 202 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-203ENST00000525013 CDIP1Q9H305 208 aa10.63□□□□□ -0.71
CAPN1-203ENST00000525013 IGLV9-49A0A0B4J1Y8 123 aa10.62□□□□□ -0.71
CAPN1-203ENST00000525013 LINC00308Q8TCZ7 52 aa10.62□□□□□ -0.71
CAPN1-203ENST00000525013 LITAFQ99732 161 aa10.62□□□□□ -0.71
CAPN1-203ENST00000525013 TIMM17BO60830 172 aa10.61□□□□□ -0.71
CAPN1-203ENST00000525013 OR13C6PQ8NH95 151 aa10.61□□□□□ -0.71
CAPN1-203ENST00000525013 TTTY13Q9BZ97 58 aa10.61□□□□□ -0.71
CAPN1-203ENST00000525013 MOBPQ13875 183 aa10.6□□□□□ -0.71
CAPN1-203ENST00000525013 TPRXLQ17RH7 258 aa10.6□□□□□ -0.71
CAPN1-203ENST00000525013 COA6Q5JTJ3 125 aaKnown RBP10.6□□□□□ -0.71
CAPN1-203ENST00000525013 SPANXCQ9NY87 97 aa10.6□□□□□ -0.71
CAPN1-203ENST00000525013 CBY1Q9Y3M2 126 aa10.6□□□□□ -0.71
CAPN1-203ENST00000525013 HINT1P49773 126 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-203ENST00000525013 SPINK1P00995 79 aa10.58□□□□□ -0.72
CAPN1-203ENST00000525013 MUC2Q02817 5179 aa10.58□□□□□ -0.72
CAPN1-203ENST00000525013 C20orf202A1L168 122 aa10.57□□□□□ -0.72
CAPN1-203ENST00000525013 SCGB1D4Q6XE38 83 aa10.55□□□□□ -0.72
CAPN1-203ENST00000525013 SSBP3-AS1Q7Z2R9 100 aa10.55□□□□□ -0.72
CAPN1-203ENST00000525013 FP248Q71RG6 208 aaPredicted RBP10.54□□□□□ -0.72
CAPN1-203ENST00000525013 ST20-AS1Q8NBB2 130 aa10.54□□□□□ -0.72
CAPN1-203ENST00000525013 C9orf153Q5TBE3 101 aa10.53□□□□□ -0.72
CAPN1-203ENST00000525013 ATOH7Q8N100 152 aa10.53□□□□□ -0.72
CAPN1-203ENST00000525013 SPANXDQ9BXN6 97 aa10.53□□□□□ -0.72
CAPN1-203ENST00000525013 A0A0U1RQV1 116 aa10.52□□□□□ -0.73
CAPN1-203ENST00000525013 LINC00518Q8N0U6 118 aa10.52□□□□□ -0.73
CAPN1-203ENST00000525013 ANKRD39Q53RE8 183 aa10.51□□□□□ -0.73
CAPN1-203ENST00000525013 C5orf52A6NGY3 159 aa10.49□□□□□ -0.73
CAPN1-203ENST00000525013 DHRS4-AS1Q9P1J3 65 aa10.49□□□□□ -0.73
CAPN1-203ENST00000525013 COX7BP24311 80 aa10.47□□□□□ -0.73
CAPN1-203ENST00000525013 C6orf99Q4VX62 202 aa10.47□□□□□ -0.73
CAPN1-203ENST00000525013 COPS9Q8WXC6 57 aa10.47□□□□□ -0.73
CAPN1-203ENST00000525013 AKR1D1P51857 326 aa10.46□□□□□ -0.73
CAPN1-203ENST00000525013 RPS29P62273 56 aaKnown RBP10.46□□□□□ -0.73
CAPN1-203ENST00000525013 PCP2Q8IVA1 136 aa10.46□□□□□ -0.73
CAPN1-203ENST00000525013 Q8N377 158 aa10.46□□□□□ -0.73
CAPN1-203ENST00000525013 SLC25A20O43772 301 aa10.45□□□□□ -0.74
CAPN1-203ENST00000525013 IFITM1P13164 125 aa10.45□□□□□ -0.74
CAPN1-203ENST00000525013 ELOF1P60002 83 aaKnown RBP10.44□□□□□ -0.74
CAPN1-203ENST00000525013 KRTAP13-3Q3SY46 172 aa10.44□□□□□ -0.74
CAPN1-203ENST00000525013 SLC25A34Q6PIV7 304 aa10.44□□□□□ -0.74
CAPN1-203ENST00000525013 A6NDN8 102 aa10.43□□□□□ -0.74
CAPN1-203ENST00000525013 Q6ZVH6 145 aa10.43□□□□□ -0.74
CAPN1-203ENST00000525013 SPRR1BP22528 89 aa10.42□□□□□ -0.74
CAPN1-203ENST00000525013 MUSTN1Q8IVN3 82 aa10.42□□□□□ -0.74
CAPN1-203ENST00000525013 S100A2P29034 98 aa10.41□□□□□ -0.74
CAPN1-203ENST00000525013 TAL2Q16559 108 aa10.41□□□□□ -0.74
CAPN1-203ENST00000525013 DEFB105AQ8NG35 78 aa10.41□□□□□ -0.74
CAPN1-203ENST00000525013 LAMTOR3Q9UHA4 124 aa10.41□□□□□ -0.74
CAPN1-203ENST00000525013 SNRPEP62304 92 aaKnown RBP10.4□□□□□ -0.74
CAPN1-203ENST00000525013 MUC17Q685J3 4493 aa10.39□□□□□ -0.75
CAPN1-203ENST00000525013 TRBV7-6A0A0J9YX20 115 aa10.39□□□□□ -0.75
CAPN1-203ENST00000525013 HIST3H2BBQ8N257 126 aa10.39□□□□□ -0.75
CAPN1-203ENST00000525013 HRCT1Q6UXD1 115 aa10.38□□□□□ -0.75
CAPN1-203ENST00000525013 HIST1H2BLQ99880 126 aa10.38□□□□□ -0.75
CAPN1-203ENST00000525013 A0A1B0GWB2 263 aa10.37□□□□□ -0.75
CAPN1-203ENST00000525013 Q1RN00 199 aa10.37□□□□□ -0.75
CAPN1-203ENST00000525013 TEX49A0A1B0GTD5 131 aa10.35□□□□□ -0.75
CAPN1-203ENST00000525013 HSBP1L1C9JCN9 74 aa10.35□□□□□ -0.75
CAPN1-203ENST00000525013 S100A1P23297 94 aa10.35□□□□□ -0.75
CAPN1-203ENST00000525013 TRAV13-2A0A0B4J235 113 aa10.34□□□□□ -0.75
CAPN1-203ENST00000525013 S100A6P06703 90 aa10.34□□□□□ -0.75
CAPN1-203ENST00000525013 LIMD2Q9BT23 127 aa10.33□□□□□ -0.76
CAPN1-203ENST00000525013 ASB16-AS1Q495Z4 193 aa10.32□□□□□ -0.76
CAPN1-203ENST00000525013 FAT4Q6V0I7 4981 aa10.32□□□□□ -0.76
CAPN1-203ENST00000525013 A4D1N5 150 aa10.31□□□□□ -0.76
CAPN1-203ENST00000525013 SMIM11BQ8TCY0 68 aa10.31□□□□□ -0.76
CAPN1-203ENST00000525013 SEC61BP60468 96 aaKnown RBP10.3□□□□□ -0.76
CAPN1-203ENST00000525013 PRO1933Q9H354 126 aa10.3□□□□□ -0.76
CAPN1-203ENST00000525013 NHP2Q9NX24 153 aaKnown RBP10.28□□□□□ -0.76
CAPN1-203ENST00000525013 IGLV5-48A0A075B6I7 105 aa10.27□□□□□ -0.77
CAPN1-203ENST00000525013 CD164Q04900 197 aa10.27□□□□□ -0.77
CAPN1-203ENST00000525013 SMIM29Q86T20 159 aa10.27□□□□□ -0.77
CAPN1-203ENST00000525013 H7C2G1 150 aa10.26□□□□□ -0.77
CAPN1-203ENST00000525013 SCGB1D1O95968 90 aa10.26□□□□□ -0.77
CAPN1-203ENST00000525013 LINC01547P58512 204 aaPredicted RBP10.26□□□□□ -0.77
CAPN1-203ENST00000525013 VAMP3Q15836 100 aa10.26□□□□□ -0.77
CAPN1-203ENST00000525013 XP32Q5T750 250 aa10.24□□□□□ -0.77
CAPN1-203ENST00000525013 LCE2AQ5TA79 106 aaPredicted RBP10.24□□□□□ -0.77
CAPN1-203ENST00000525013 A0A0G2JQZ4 141 aa10.22□□□□□ -0.77
CAPN1-203ENST00000525013 C9orf92A6NGG3 77 aa10.2□□□□□ -0.78
CAPN1-203ENST00000525013 HIST1H4GQ99525 98 aa10.2□□□□□ -0.78
CAPN1-203ENST00000525013 LINC00575Q6W349 94 aa10.19□□□□□ -0.78
CAPN1-203ENST00000525013 C12orf57Q99622 126 aa10.19□□□□□ -0.78
CAPN1-203ENST00000525013 KRTAP4-1Q9BYQ7 146 aa10.19□□□□□ -0.78
CAPN1-203ENST00000525013 F8WEM9 126 aa10.17□□□□□ -0.78
CAPN1-203ENST00000525013 hADV29S1A0JD25 119 aa10.16□□□□□ -0.78
CAPN1-203ENST00000525013 COX8AP10176 69 aa10.16□□□□□ -0.78
CAPN1-203ENST00000525013 Q5XG85 94 aa10.15□□□□□ -0.78
CAPN1-203ENST00000525013 Q6ZQY7 126 aa10.15□□□□□ -0.78
CAPN1-203ENST00000525013 C1orf195Q5TG92 126 aa10.14□□□□□ -0.79
CAPN1-203ENST00000525013 DLEU1O43261 78 aa10.11□□□□□ -0.79
CAPN1-203ENST00000525013 TCL1BO95988 128 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms