RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 KRTAP13-1Q8IUC0 172 aa2.76□□□□□ -1.97
CHMP4A-202ENST00000524955 PPDPFQ9H3Y8 114 aa2.76□□□□□ -1.97
CHMP4A-202ENST00000524955 KRTAP29-1A8MX34 341 aaPredicted RBP2.75□□□□□ -1.97
CHMP4A-202ENST00000524955 B5MCH6 92 aa2.75□□□□□ -1.97
CHMP4A-202ENST00000524955 KRTAP4-16G5E9R7 235 aaPredicted RBP2.75□□□□□ -1.97
CHMP4A-202ENST00000524955 H7C2G1 150 aa2.75□□□□□ -1.97
CHMP4A-202ENST00000524955 DLEU1O43261 78 aa2.75□□□□□ -1.97
CHMP4A-202ENST00000524955 ZNF73O43830 326 aaPredicted RBP2.75□□□□□ -1.97
CHMP4A-202ENST00000524955 SPRR1AP35321 89 aa2.75□□□□□ -1.97
CHMP4A-202ENST00000524955 S100A12P80511 92 aa2.75□□□□□ -1.97
CHMP4A-202ENST00000524955 C6orf99Q4VX62 202 aa2.75□□□□□ -1.97
CHMP4A-202ENST00000524955 SMCR5Q8TEV8 140 aa2.75□□□□□ -1.97
CHMP4A-202ENST00000524955 LINC01600Q96MT4 127 aa2.75□□□□□ -1.97
CHMP4A-202ENST00000524955 Q9BRP9 147 aa2.75□□□□□ -1.97
CHMP4A-202ENST00000524955 VPS13BQ7Z7G8 4022 aa2.74□□□□□ -1.97
CHMP4A-202ENST00000524955 A0A087X002 238 aa2.74□□□□□ -1.97
CHMP4A-202ENST00000524955 OXTP01178 125 aa2.74□□□□□ -1.97
CHMP4A-202ENST00000524955 RPL13AP40429 203 aaKnown RBP2.74□□□□□ -1.97
CHMP4A-202ENST00000524955 FXYD2P54710 66 aa2.74□□□□□ -1.97
CHMP4A-202ENST00000524955 Q6ZVH6 145 aa2.74□□□□□ -1.97
CHMP4A-202ENST00000524955 LINC00518Q8N0U6 118 aa2.74□□□□□ -1.97
CHMP4A-202ENST00000524955 ST20-AS1Q8NBB2 130 aa2.74□□□□□ -1.97
CHMP4A-202ENST00000524955 SMIM11BQ8TCY0 68 aa2.74□□□□□ -1.97
CHMP4A-202ENST00000524955 FLG2Q5D862 2391 aaPredicted RBP2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 K7ERJ3 54 aa2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 CFC1BP0CG36 223 aa2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 CFC1P0CG37 223 aa2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 COX7BP24311 80 aa2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 KRTAP10-8P60410 259 aa2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 KRTAP13-2Q52LG2 175 aa2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 GAGE2AQ6NT46 116 aa2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 Q6ZRX8 168 aa2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 CEND1Q8N111 149 aa2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 C3orf22Q8N5N4 141 aa2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 DEFB105AQ8NG35 78 aa2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 COPS9Q8WXC6 57 aa2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 HIGD1BQ9P298 99 aa2.73□□□□□ -1.97
CHMP4A-202ENST00000524955 TRAV13-2A0A0B4J235 113 aa2.72□□□□□ -1.97
CHMP4A-202ENST00000524955 TSPAN13O95857 204 aa2.72□□□□□ -1.97
CHMP4A-202ENST00000524955 HINT1P49773 126 aaPredicted RBP2.72□□□□□ -1.97
CHMP4A-202ENST00000524955 CTAG1AP78358 180 aa2.72□□□□□ -1.97
CHMP4A-202ENST00000524955 TYMSOSQ8TAI1 123 aa2.72□□□□□ -1.97
CHMP4A-202ENST00000524955 RAB37Q96AX2 223 aa2.72□□□□□ -1.97
CHMP4A-202ENST00000524955 SPRR4Q96PI1 79 aa2.72□□□□□ -1.97
CHMP4A-202ENST00000524955 NHP2Q9NX24 153 aaKnown RBP2.72□□□□□ -1.97
CHMP4A-202ENST00000524955 UQCR10Q9UDW1 63 aa2.72□□□□□ -1.97
CHMP4A-202ENST00000524955 PKHD1L1Q86WI1 4243 aa2.72□□□□□ -1.97
CHMP4A-202ENST00000524955 MYCBP2O75592 4640 aa2.72□□□□□ -1.97
CHMP4A-202ENST00000524955 LRP1Q07954 4544 aaKnown RBP2.71□□□□□ -1.98
CHMP4A-202ENST00000524955 IGLV9-49A0A0B4J1Y8 123 aa2.71□□□□□ -1.98
CHMP4A-202ENST00000524955 SMIM6P0DI80 62 aa2.71□□□□□ -1.98
CHMP4A-202ENST00000524955 CRYGAP11844 174 aa2.71□□□□□ -1.98
CHMP4A-202ENST00000524955 ELOF1P60002 83 aaKnown RBP2.71□□□□□ -1.98
CHMP4A-202ENST00000524955 HSD52Q0P140 79 aa2.71□□□□□ -1.98
CHMP4A-202ENST00000524955 Q1RN00 199 aa2.71□□□□□ -1.98
CHMP4A-202ENST00000524955 A0A0B4J2C4 111 aa2.7□□□□□ -1.98
CHMP4A-202ENST00000524955 A0A0G2JQZ4 141 aa2.7□□□□□ -1.98
CHMP4A-202ENST00000524955 TAL2Q16559 108 aa2.7□□□□□ -1.98
CHMP4A-202ENST00000524955 BVES-AS1Q5T3Y7 98 aa2.7□□□□□ -1.98
CHMP4A-202ENST00000524955 NAA38Q9BRA0 125 aaKnown RBP2.7□□□□□ -1.98
CHMP4A-202ENST00000524955 TMEM238LA0A1B0GVL6 79 aa2.69□□□□□ -1.98
CHMP4A-202ENST00000524955 A0A1B0GWB2 263 aa2.69□□□□□ -1.98
CHMP4A-202ENST00000524955 A6NJY4 79 aa2.69□□□□□ -1.98
CHMP4A-202ENST00000524955 MOBPQ13875 183 aa2.69□□□□□ -1.98
CHMP4A-202ENST00000524955 BATFQ16520 125 aa2.69□□□□□ -1.98
CHMP4A-202ENST00000524955 LINC00575Q6W349 94 aa2.69□□□□□ -1.98
CHMP4A-202ENST00000524955 CLEC2BQ92478 149 aa2.69□□□□□ -1.98
CHMP4A-202ENST00000524955 FAM218AQ96MZ4 157 aa2.69□□□□□ -1.98
CHMP4A-202ENST00000524955 DHRS4-AS1Q9P1J3 65 aa2.69□□□□□ -1.98
CHMP4A-202ENST00000524955 PRO1854Q9UHT4 67 aa2.69□□□□□ -1.98
CHMP4A-202ENST00000524955 CBY1Q9Y3M2 126 aa2.69□□□□□ -1.98
CHMP4A-202ENST00000524955 ZNF706Q9Y5V0 76 aaPredicted RBP2.69□□□□□ -1.98
CHMP4A-202ENST00000524955 hADV29S1A0JD25 119 aa2.68□□□□□ -1.98
CHMP4A-202ENST00000524955 TRIAP1O43715 76 aa2.68□□□□□ -1.98
CHMP4A-202ENST00000524955 PSMB2P49721 201 aa2.68□□□□□ -1.98
CHMP4A-202ENST00000524955 LINC01547P58512 204 aaPredicted RBP2.68□□□□□ -1.98
CHMP4A-202ENST00000524955 VAMP3Q15836 100 aa2.68□□□□□ -1.98
CHMP4A-202ENST00000524955 LINC00483Q53H64 154 aa2.68□□□□□ -1.98
CHMP4A-202ENST00000524955 C9orf153Q5TBE3 101 aa2.68□□□□□ -1.98
CHMP4A-202ENST00000524955 HRCT1Q6UXD1 115 aa2.68□□□□□ -1.98
CHMP4A-202ENST00000524955 Q6ZQY7 126 aa2.68□□□□□ -1.98
CHMP4A-202ENST00000524955 Q8NBF4 154 aa2.68□□□□□ -1.98
CHMP4A-202ENST00000524955 RETNLBQ9BQ08 111 aa2.68□□□□□ -1.98
CHMP4A-202ENST00000524955 FAT3Q8TDW7 4589 aa2.68□□□□□ -1.98
CHMP4A-202ENST00000524955 TRBV7-6A0A0J9YX20 115 aa2.67□□□□□ -1.98
CHMP4A-202ENST00000524955 A0A1B0GV72 72 aa2.67□□□□□ -1.98
CHMP4A-202ENST00000524955 TSTD3H0UI37 97 aa2.67□□□□□ -1.98
CHMP4A-202ENST00000524955 SLC25A20O43772 301 aa2.67□□□□□ -1.98
CHMP4A-202ENST00000524955 FAM229BQ4G0N7 80 aa2.67□□□□□ -1.98
CHMP4A-202ENST00000524955 Q8N377 158 aa2.67□□□□□ -1.98
CHMP4A-202ENST00000524955 LINC00304Q8N9R0 145 aa2.67□□□□□ -1.98
CHMP4A-202ENST00000524955 TEX49A0A1B0GTD5 131 aa2.66□□□□□ -1.98
CHMP4A-202ENST00000524955 PCP4L1A6NKN8 68 aa2.66□□□□□ -1.98
CHMP4A-202ENST00000524955 PRR4Q16378 134 aa2.66□□□□□ -1.98
CHMP4A-202ENST00000524955 SMIM29Q86T20 159 aa2.66□□□□□ -1.98
CHMP4A-202ENST00000524955 HERC1Q15751 4861 aa2.65□□□□□ -1.98
CHMP4A-202ENST00000524955 IGLV5-48A0A075B6I7 105 aa2.65□□□□□ -1.99
CHMP4A-202ENST00000524955 M0R143 59 aa2.65□□□□□ -1.99
CHMP4A-202ENST00000524955 SCGB1C2P0DMR2 95 aa2.65□□□□□ -1.99
CHMP4A-202ENST00000524955 SPRR1BP22528 89 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms