RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 MT-ATP8P03928 68 aa4.21□□□□□ -1.74
NUP98-213ENST00000524563 Q6Q795 121 aa4.21□□□□□ -1.74
NUP98-213ENST00000524563 MIR7-3HGQ8N6C7 128 aa4.21□□□□□ -1.74
NUP98-213ENST00000524563 DPH3Q96FX2 82 aa4.21□□□□□ -1.74
NUP98-213ENST00000524563 PFN2P35080 140 aa4.2□□□□□ -1.74
NUP98-213ENST00000524563 SOSTDC1Q6X4U4 206 aa4.2□□□□□ -1.74
NUP98-213ENST00000524563 TRAV13-2A0A0B4J235 113 aa4.19□□□□□ -1.74
NUP98-213ENST00000524563 SLPIP03973 132 aa4.19□□□□□ -1.74
NUP98-213ENST00000524563 SPAG11BQ08648 103 aa4.19□□□□□ -1.74
NUP98-213ENST00000524563 C7orf33Q8WU49 177 aa4.19□□□□□ -1.74
NUP98-213ENST00000524563 GVQW2A0A096LPI5 108 aaPredicted RBP4.18□□□□□ -1.74
NUP98-213ENST00000524563 TRACP01848 142 aa4.18□□□□□ -1.74
NUP98-213ENST00000524563 CNBPP62633 177 aaKnown RBP4.18□□□□□ -1.74
NUP98-213ENST00000524563 HIGD2BQ4VC39 106 aa4.18□□□□□ -1.74
NUP98-213ENST00000524563 C2orf82Q6UX34 121 aa4.18□□□□□ -1.74
NUP98-213ENST00000524563 C9orf163Q8N9P6 203 aa4.18□□□□□ -1.74
NUP98-213ENST00000524563 SND1-IT1Q9HBX3 110 aa4.18□□□□□ -1.74
NUP98-213ENST00000524563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.18□□□□□ -1.74
NUP98-213ENST00000524563 TEX49A0A1B0GTD5 131 aa4.17□□□□□ -1.74
NUP98-213ENST00000524563 KRTAP10-4P60372 401 aaPredicted RBP4.17□□□□□ -1.74
NUP98-213ENST00000524563 COX17Q14061 63 aa4.17□□□□□ -1.74
NUP98-213ENST00000524563 SDIM1Q6ZPB5 146 aa4.17□□□□□ -1.74
NUP98-213ENST00000524563 CLEC2BQ92478 149 aa4.17□□□□□ -1.74
NUP98-213ENST00000524563 LINC00526Q96FQ7 95 aa4.17□□□□□ -1.74
NUP98-213ENST00000524563 FAT3Q8TDW7 4589 aa4.16□□□□□ -1.74
NUP98-213ENST00000524563 PANO1I0J062 215 aa4.16□□□□□ -1.74
NUP98-213ENST00000524563 CHTF8P0CG12 524 aa4.16□□□□□ -1.74
NUP98-213ENST00000524563 RPL28P46779 137 aaKnown RBP4.16□□□□□ -1.74
NUP98-213ENST00000524563 KIAA0087Q14695 138 aa4.16□□□□□ -1.74
NUP98-213ENST00000524563 OR13C6PQ8NH95 151 aa4.16□□□□□ -1.74
NUP98-213ENST00000524563 C22orf24Q9Y442 160 aa4.16□□□□□ -1.74
NUP98-213ENST00000524563 IGKV2-24A0A0C4DH68 120 aa4.15□□□□□ -1.75
NUP98-213ENST00000524563 TRBV7-7A0A0K0K1E9 115 aa4.15□□□□□ -1.75
NUP98-213ENST00000524563 ACYP1P07311 99 aa4.15□□□□□ -1.75
NUP98-213ENST00000524563 Q6ZRU5 148 aa4.15□□□□□ -1.75
NUP98-213ENST00000524563 IGKV2-28A0A075B6P5 120 aa4.14□□□□□ -1.75
NUP98-213ENST00000524563 SNCGO76070 127 aa4.14□□□□□ -1.75
NUP98-213ENST00000524563 IGKV2D-28P01615 120 aa4.14□□□□□ -1.75
NUP98-213ENST00000524563 LCE2AQ5TA79 106 aaPredicted RBP4.14□□□□□ -1.75
NUP98-213ENST00000524563 CAMK2N2Q96S95 79 aa4.14□□□□□ -1.75
NUP98-213ENST00000524563 PKIGQ9Y2B9 76 aa4.14□□□□□ -1.75
NUP98-213ENST00000524563 LRP1Q07954 4544 aaKnown RBP4.14□□□□□ -1.75
NUP98-213ENST00000524563 HMCN2Q8NDA2 5059 aa4.14□□□□□ -1.75
NUP98-213ENST00000524563 A0A087WYN8 130 aa4.13□□□□□ -1.75
NUP98-213ENST00000524563 NDUFC2O95298 119 aa4.13□□□□□ -1.75
NUP98-213ENST00000524563 UNQ6190/PRO20217Q6UXQ8 127 aa4.13□□□□□ -1.75
NUP98-213ENST00000524563 LINC00337Q8N6G1 96 aa4.13□□□□□ -1.75
NUP98-213ENST00000524563 SPACA4Q8TDM5 124 aa4.13□□□□□ -1.75
NUP98-213ENST00000524563 OBSCN-AS1Q96MR7 158 aa4.13□□□□□ -1.75
NUP98-213ENST00000524563 FAM218AQ96MZ4 157 aa4.13□□□□□ -1.75
NUP98-213ENST00000524563 IMUPQ9GZP8 106 aa4.13□□□□□ -1.75
NUP98-213ENST00000524563 A0A096LNI7 61 aa4.12□□□□□ -1.75
NUP98-213ENST00000524563 F8WDY8 70 aa4.12□□□□□ -1.75
NUP98-213ENST00000524563 H0YGX0 51 aa4.12□□□□□ -1.75
NUP98-213ENST00000524563 DNAL4O96015 105 aa4.12□□□□□ -1.75
NUP98-213ENST00000524563 NDUFV3P56181 108 aaKnown RBP4.12□□□□□ -1.75
NUP98-213ENST00000524563 SYCNQ0VAF6 134 aa4.12□□□□□ -1.75
NUP98-213ENST00000524563 GAGE2BQ13066 116 aa4.12□□□□□ -1.75
NUP98-213ENST00000524563 GAGE2EQ4V326 116 aa4.12□□□□□ -1.75
NUP98-213ENST00000524563 C9orf116Q5BN46 136 aaPredicted RBP4.12□□□□□ -1.75
NUP98-213ENST00000524563 S100A7L2Q5SY68 101 aa4.12□□□□□ -1.75
NUP98-213ENST00000524563 C2orf48Q96LS8 159 aa4.12□□□□□ -1.75
NUP98-213ENST00000524563 GAGE2DQ9UEU5 116 aa4.12□□□□□ -1.75
NUP98-213ENST00000524563 NCR3O14931 201 aa4.11□□□□□ -1.75
NUP98-213ENST00000524563 MT1HL1P0DM35 61 aa4.11□□□□□ -1.75
NUP98-213ENST00000524563 PRR3P79522 188 aaKnown RBP4.11□□□□□ -1.75
NUP98-213ENST00000524563 C10orf25Q5T742 122 aa4.11□□□□□ -1.75
NUP98-213ENST00000524563 REG3GQ6UW15 175 aa4.11□□□□□ -1.75
NUP98-213ENST00000524563 SMIM11BQ8TCY0 68 aa4.11□□□□□ -1.75
NUP98-213ENST00000524563 LINC00167Q96N53 147 aa4.11□□□□□ -1.75
NUP98-213ENST00000524563 ANAPC13Q9BS18 74 aa4.11□□□□□ -1.75
NUP98-213ENST00000524563 TMEM126AQ9H061 195 aa4.11□□□□□ -1.75
NUP98-213ENST00000524563 C6orf48Q9UBA6 75 aa4.11□□□□□ -1.75
NUP98-213ENST00000524563 UBR4Q5T4S7 5183 aa4.1□□□□□ -1.75
NUP98-213ENST00000524563 A0A1B0GX51 115 aa4.1□□□□□ -1.75
NUP98-213ENST00000524563 LINC00643Q86TS7 51 aa4.1□□□□□ -1.75
NUP98-213ENST00000524563 LOC107984640A0A0U1RRK4 108 aa4.09□□□□□ -1.75
NUP98-213ENST00000524563 BAALC-AS2P0C853 105 aa4.09□□□□□ -1.75
NUP98-213ENST00000524563 LORP23490 312 aaPredicted RBP4.09□□□□□ -1.75
NUP98-213ENST00000524563 RPL18AQ02543 176 aaKnown RBP4.09□□□□□ -1.75
NUP98-213ENST00000524563 SMCR5Q8TEV8 140 aa4.09□□□□□ -1.75
NUP98-213ENST00000524563 PLAC8Q9NZF1 115 aa4.09□□□□□ -1.75
NUP98-213ENST00000524563 LINC00474Q9P2X8 69 aa4.09□□□□□ -1.75
NUP98-213ENST00000524563 TNXBP22105 4242 aa4.08□□□□□ -1.76
NUP98-213ENST00000524563 NDUFC2-KCTD14E9PQ53 114 aa4.07□□□□□ -1.76
NUP98-213ENST00000524563 TLX1NBP0CAT3 122 aa4.07□□□□□ -1.76
NUP98-213ENST00000524563 HIST1H4AP62805 103 aaKnown RBP4.07□□□□□ -1.76
NUP98-213ENST00000524563 Q6ZRP5 223 aa4.07□□□□□ -1.76
NUP98-213ENST00000524563 XAGE1AQ9HD64 81 aa4.07□□□□□ -1.76
NUP98-213ENST00000524563 A0A1W2PNN7 141 aa4.06□□□□□ -1.76
NUP98-213ENST00000524563 C6orf99Q4VX62 202 aa4.06□□□□□ -1.76
NUP98-213ENST00000524563 TRAV23DV6A0A075B6W5 121 aa4.05□□□□□ -1.76
NUP98-213ENST00000524563 FAM168BA1KXE4 195 aa4.05□□□□□ -1.76
NUP98-213ENST00000524563 CCDC179H3BU77 68 aa4.05□□□□□ -1.76
NUP98-213ENST00000524563 M0R378 163 aa4.05□□□□□ -1.76
NUP98-213ENST00000524563 SPINK6Q6UWN8 80 aa4.05□□□□□ -1.76
NUP98-213ENST00000524563 NKAPP1Q8N9T2 125 aa4.05□□□□□ -1.76
NUP98-213ENST00000524563 DIRC1Q969H9 104 aa4.05□□□□□ -1.76
NUP98-213ENST00000524563 ORMDL1Q9P0S3 153 aa4.05□□□□□ -1.76
NUP98-213ENST00000524563 TRBV10-3A0A0K0K1G6 114 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms