RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 DEFB131AP59861 70 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 C9orf153Q5TBE3 101 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 Q6AWC8 147 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 XAF1Q6GPH4 301 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 C2orf82Q6UX34 121 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 ATP11AUNQ6ZP68 121 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 Q6ZSA8 131 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 C6orf201Q7Z4U5 140 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 SNX29P2Q8IUI4 249 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 ATP6V0E2Q8NHE4 81 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 TMEM254Q8TBM7 123 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 ZNF431Q8TF32 576 aaPredicted RBP1.16□□□□□ -2.22
CSMD1-214ENST00000524177 ZC2HC1AQ96GY0 325 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 HYLS1Q96M11 299 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 SMIM7Q9BQ49 75 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 AGPAT4-IT1Q9H0P7 198 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 BET1LQ9NYM9 111 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 PKHD1L1Q86WI1 4243 aa1.16□□□□□ -2.22
CSMD1-214ENST00000524177 UBR4Q5T4S7 5183 aa1.15□□□□□ -2.22
CSMD1-214ENST00000524177 IGKV3-7A0A075B6H7 116 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 TRBV6-7A0A0A0MS04 114 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 LOC100130705A0A1B0GUX0 176 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 IGKV2-29A2NJV5 120 aaPredicted RBP1.15□□□□□ -2.23
CSMD1-214ENST00000524177 TMEM14DPA8MWL7 114 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 CCDC179H3BU77 68 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 K7EIM0 57 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 SNCGO76070 127 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 CD3DP04234 171 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 SLC25A4P12235 298 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 NPC2P61916 151 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 SNRPGP62308 76 aaKnown RBP1.15□□□□□ -2.23
CSMD1-214ENST00000524177 CATR1Q13166 79 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 CASC2Q6XLA1 102 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 LSM10Q969L4 123 aaKnown RBP1.15□□□□□ -2.23
CSMD1-214ENST00000524177 LINC00526Q96FQ7 95 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 RHPN1-AS1Q9BWJ2 59 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 SNHG12Q9BXW3 62 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 TMEM242Q9NWH2 141 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 FKBP11Q9NYL4 201 aa1.15□□□□□ -2.23
CSMD1-214ENST00000524177 LSM2Q9Y333 95 aaKnown RBP1.15□□□□□ -2.23
CSMD1-214ENST00000524177 SRRM2Q9UQ35 2752 aaKnown RBP1.15□□□□□ -2.23
CSMD1-214ENST00000524177 A8MTW9 85 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 TMEM262E9PQX1 116 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 SSSCA1O60232 199 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 NDUFB6O95139 128 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 HTN3P15516 51 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 CCL18P55774 89 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 WT1-ASQ06250 92 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 SPANXN1Q5VSR9 72 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 FOXI2Q6ZQN5 318 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 C9orf62Q8N4C0 152 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 C5orf17Q8NAS9 161 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 DEFB104AQ8WTQ1 72 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 TSKUQ8WUA8 353 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 ARHGAP5-AS1Q96IT6 56 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 ATG5Q9H1Y0 275 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 RABAC1Q9UI14 185 aa1.14□□□□□ -2.23
CSMD1-214ENST00000524177 TNXBP22105 4242 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 A0A087WTM6 91 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 LOC110117498A0A087WWA1 95 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 H3BNG1 76 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 H3BQ15 152 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 I3L2K1 104 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 ERC2-IT1O76042 136 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 SMR3BP02814 79 aaPredicted RBP1.13□□□□□ -2.23
CSMD1-214ENST00000524177 IL5P05113 134 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 TRAPPC2P0DI81 140 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 TRAPPC2BP0DI82 140 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 KRTAP10-4P60372 401 aaPredicted RBP1.13□□□□□ -2.23
CSMD1-214ENST00000524177 IQCJQ1A5X6 159 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 PSMG4Q5JS54 123 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 MIC13Q5XKP0 118 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 RPL7L1Q6DKI1 246 aaKnown RBP1.13□□□□□ -2.23
CSMD1-214ENST00000524177 Q8N814 137 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 VAMP8Q9BV40 100 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 NDUFA4L2Q9NRX3 87 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 SNURFQ9Y675 71 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 HMCN2Q8NDA2 5059 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 FAT1Q14517 4588 aa1.13□□□□□ -2.23
CSMD1-214ENST00000524177 A0A087WSZ3 146 aa1.12□□□□□ -2.23
CSMD1-214ENST00000524177 IGKV2D-26A0A0A0MRZ7 120 aa1.12□□□□□ -2.23
CSMD1-214ENST00000524177 LOC107984156A0A0G2JMH3 177 aa1.12□□□□□ -2.23
CSMD1-214ENST00000524177 UBE2L5PA0A1B0GUS4 154 aa1.12□□□□□ -2.23
CSMD1-214ENST00000524177 MPC2O95563 127 aa1.12□□□□□ -2.23
CSMD1-214ENST00000524177 PPYP01298 95 aa1.12□□□□□ -2.23
CSMD1-214ENST00000524177 ADCYAP1P18509 176 aa1.12□□□□□ -2.23
CSMD1-214ENST00000524177 KRTDAPP60985 99 aa1.12□□□□□ -2.23
CSMD1-214ENST00000524177 UBE2L3P68036 154 aaKnown RBP1.12□□□□□ -2.23
CSMD1-214ENST00000524177 HAMPP81172 84 aa1.12□□□□□ -2.23
CSMD1-214ENST00000524177 PRCDQ00LT1 54 aa1.12□□□□□ -2.23
CSMD1-214ENST00000524177 INSL4Q14641 139 aa1.12□□□□□ -2.23
CSMD1-214ENST00000524177 GDF5OSQ5U4N7 250 aa1.12□□□□□ -2.23
CSMD1-214ENST00000524177 ARL17AQ8IVW1 177 aa1.12□□□□□ -2.23
CSMD1-214ENST00000524177 TMEM263Q8WUH6 116 aaKnown RBP1.12□□□□□ -2.23
CSMD1-214ENST00000524177 FAT3Q8TDW7 4589 aa1.11□□□□□ -2.23
CSMD1-214ENST00000524177 DNAH8Q96JB1 4490 aa1.11□□□□□ -2.23
CSMD1-214ENST00000524177 IGKV2-40A0A087WW87 121 aaPredicted RBP1.11□□□□□ -2.23
CSMD1-214ENST00000524177 A0A096LPF7 62 aa1.11□□□□□ -2.23
CSMD1-214ENST00000524177 A6NN06 94 aa1.11□□□□□ -2.23
CSMD1-214ENST00000524177 IGKV2D-40P01614 121 aaPredicted RBP1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms