RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 TRAV23DV6A0A075B6W5 121 aa8.78□□□□□ -1
PVT1-220ENST00000524165 LOC107984156A0A0G2JMH3 177 aa8.78□□□□□ -1
PVT1-220ENST00000524165 LINC00587B1AMM8 73 aa8.78□□□□□ -1
PVT1-220ENST00000524165 ARL17AQ8IVW1 177 aa8.78□□□□□ -1
PVT1-220ENST00000524165 HERV-K104P63124 156 aa8.77□□□□□ -1.01
PVT1-220ENST00000524165 ZNF73O43830 326 aaPredicted RBP8.76□□□□□ -1.01
PVT1-220ENST00000524165 SPANXB1Q9NS25 103 aaPredicted RBP8.76□□□□□ -1.01
PVT1-220ENST00000524165 S100A7L2Q5SY68 101 aa8.75□□□□□ -1.01
PVT1-220ENST00000524165 MAP1LC3CQ9BXW4 147 aa8.75□□□□□ -1.01
PVT1-220ENST00000524165 Q1RN00 199 aa8.74□□□□□ -1.01
PVT1-220ENST00000524165 ANAPC16Q96DE5 110 aa8.74□□□□□ -1.01
PVT1-220ENST00000524165 TMEM223A0PJW6 202 aa8.73□□□□□ -1.01
PVT1-220ENST00000524165 AKR1D1P51857 326 aa8.73□□□□□ -1.01
PVT1-220ENST00000524165 SMCO4Q9NRQ5 59 aa8.72□□□□□ -1.01
PVT1-220ENST00000524165 MT-ND4LP03901 98 aa8.71□□□□□ -1.02
PVT1-220ENST00000524165 HINT1P49773 126 aaPredicted RBP8.71□□□□□ -1.02
PVT1-220ENST00000524165 BAGE3Q86Y29 109 aa8.71□□□□□ -1.02
PVT1-220ENST00000524165 C20orf166-AS1Q96NR2 134 aa8.7□□□□□ -1.02
PVT1-220ENST00000524165 A0A096LNJ9 63 aa8.69□□□□□ -1.02
PVT1-220ENST00000524165 NDUFC2O95298 119 aa8.69□□□□□ -1.02
PVT1-220ENST00000524165 TCL1BO95988 128 aa8.69□□□□□ -1.02
PVT1-220ENST00000524165 DHRS4-AS1Q9P1J3 65 aa8.69□□□□□ -1.02
PVT1-220ENST00000524165 LGALS3P17931 250 aaKnown RBP8.68□□□□□ -1.02
PVT1-220ENST00000524165 C6orf99Q4VX62 202 aa8.68□□□□□ -1.02
PVT1-220ENST00000524165 OBSCN-AS1Q96MR7 158 aa8.67□□□□□ -1.02
PVT1-220ENST00000524165 HBDP02042 147 aa8.66□□□□□ -1.02
PVT1-220ENST00000524165 CBY1Q9Y3M2 126 aa8.66□□□□□ -1.02
PVT1-220ENST00000524165 MYMXA0A1B0GTQ4 84 aa8.65□□□□□ -1.02
PVT1-220ENST00000524165 PCP2Q8IVA1 136 aa8.65□□□□□ -1.02
PVT1-220ENST00000524165 TAL2Q16559 108 aa8.64□□□□□ -1.03
PVT1-220ENST00000524165 MIEN1Q9BRT3 115 aa8.64□□□□□ -1.03
PVT1-220ENST00000524165 A0A0G2JQZ4 141 aa8.63□□□□□ -1.03
PVT1-220ENST00000524165 FAM236DA0A1B0GTK5 79 aa8.63□□□□□ -1.03
PVT1-220ENST00000524165 FAM236CP0DP71 79 aa8.63□□□□□ -1.03
PVT1-220ENST00000524165 COMMD7Q86VX2 200 aa8.63□□□□□ -1.03
PVT1-220ENST00000524165 TEX49A0A1B0GTD5 131 aa8.62□□□□□ -1.03
PVT1-220ENST00000524165 DEFB105AQ8NG35 78 aa8.61□□□□□ -1.03
PVT1-220ENST00000524165 IFITM2Q01629 132 aa8.56□□□□□ -1.04
PVT1-220ENST00000524165 PMCHL1Q16048 86 aa8.56□□□□□ -1.04
PVT1-220ENST00000524165 URB1-AS1Q96HZ7 61 aa8.56□□□□□ -1.04
PVT1-220ENST00000524165 LINC00614P0C842 121 aa8.55□□□□□ -1.04
PVT1-220ENST00000524165 Q96NJ1 140 aa8.55□□□□□ -1.04
PVT1-220ENST00000524165 TRAV12-1A0A0B4J245 112 aa8.54□□□□□ -1.04
PVT1-220ENST00000524165 ELOF1P60002 83 aaKnown RBP8.54□□□□□ -1.04
PVT1-220ENST00000524165 RPS10P5Q9NQ39 176 aa8.52□□□□□ -1.05
PVT1-220ENST00000524165 RBM12B-AS1Q9P1G2 102 aa8.52□□□□□ -1.05
PVT1-220ENST00000524165 A8MUU9 505 aa8.51□□□□□ -1.05
PVT1-220ENST00000524165 COX7BP24311 80 aa8.51□□□□□ -1.05
PVT1-220ENST00000524165 TSPEAR-AS2P59090 65 aa8.51□□□□□ -1.05
PVT1-220ENST00000524165 RHEBQ15382 184 aa8.51□□□□□ -1.05
PVT1-220ENST00000524165 SOSTDC1Q6X4U4 206 aa8.51□□□□□ -1.05
PVT1-220ENST00000524165 MPLKIPQ8TAP9 179 aa8.51□□□□□ -1.05
PVT1-220ENST00000524165 IGLV5-48A0A075B6I7 105 aa8.5□□□□□ -1.05
PVT1-220ENST00000524165 IGFL1Q6UW32 110 aa8.5□□□□□ -1.05
PVT1-220ENST00000524165 EIF4EBP3O60516 100 aaPredicted RBP8.49□□□□□ -1.05
PVT1-220ENST00000524165 FABP9Q0Z7S8 132 aa8.49□□□□□ -1.05
PVT1-220ENST00000524165 COX19Q49B96 90 aa8.48□□□□□ -1.05
PVT1-220ENST00000524165 LEPROTO15243 131 aa8.47□□□□□ -1.05
PVT1-220ENST00000524165 OR13C6PQ8NH95 151 aa8.47□□□□□ -1.05
PVT1-220ENST00000524165 C18orf32Q8TCD1 76 aa8.47□□□□□ -1.05
PVT1-220ENST00000524165 NPC2P61916 151 aa8.46□□□□□ -1.06
PVT1-220ENST00000524165 SEC11CQ9BY50 192 aa8.46□□□□□ -1.06
PVT1-220ENST00000524165 KRTAP2-3P0C7H8 128 aa8.44□□□□□ -1.06
PVT1-220ENST00000524165 NMUP48645 174 aa8.44□□□□□ -1.06
PVT1-220ENST00000524165 IFI27L1Q96BM0 104 aa8.44□□□□□ -1.06
PVT1-220ENST00000524165 KRTAP2-4Q9BYR9 128 aa8.44□□□□□ -1.06
PVT1-220ENST00000524165 HRES1P13985 223 aa8.43□□□□□ -1.06
PVT1-220ENST00000524165 MDN1Q9NU22 5596 aa8.43□□□□□ -1.06
PVT1-220ENST00000524165 J3QQQ9 107 aa8.42□□□□□ -1.06
PVT1-220ENST00000524165 SPANXDQ9BXN6 97 aa8.42□□□□□ -1.06
PVT1-220ENST00000524165 SPANXCQ9NY87 97 aa8.42□□□□□ -1.06
PVT1-220ENST00000524165 TRBV7-7A0A0K0K1E9 115 aa8.41□□□□□ -1.06
PVT1-220ENST00000524165 S100PP25815 95 aa8.41□□□□□ -1.06
PVT1-220ENST00000524165 ADAMTSL4-AS1Q5T5F5 129 aa8.41□□□□□ -1.06
PVT1-220ENST00000524165 Q6ZVH6 145 aa8.41□□□□□ -1.06
PVT1-220ENST00000524165 TRBV7-6A0A0J9YX20 115 aa8.4□□□□□ -1.06
PVT1-220ENST00000524165 KRTAP5-9P26371 169 aa8.4□□□□□ -1.06
PVT1-220ENST00000524165 Q8N9P0 234 aaPredicted RBP8.4□□□□□ -1.06
PVT1-220ENST00000524165 KRTAP16-1A8MUX0 517 aa8.39□□□□□ -1.07
PVT1-220ENST00000524165 KMT2DO14686 5537 aa8.38□□□□□ -1.07
PVT1-220ENST00000524165 A8MWP4 228 aa8.38□□□□□ -1.07
PVT1-220ENST00000524165 A0A1B0GWB2 263 aa8.35□□□□□ -1.07
PVT1-220ENST00000524165 F8WEM9 126 aa8.35□□□□□ -1.07
PVT1-220ENST00000524165 A0A0J9YXY3 114 aa8.34□□□□□ -1.07
PVT1-220ENST00000524165 LST1O00453 97 aa8.34□□□□□ -1.07
PVT1-220ENST00000524165 Q6JHZ5 121 aa8.34□□□□□ -1.07
PVT1-220ENST00000524165 LINC00308Q8TCZ7 52 aa8.34□□□□□ -1.07
PVT1-220ENST00000524165 CLEC2BQ92478 149 aa8.34□□□□□ -1.07
PVT1-220ENST00000524165 MTURNQ8N3F0 131 aa8.33□□□□□ -1.08
PVT1-220ENST00000524165 NOTCH2NLQ7Z3S9 236 aa8.32□□□□□ -1.08
PVT1-220ENST00000524165 HERVK_113P61574 105 aa8.31□□□□□ -1.08
PVT1-220ENST00000524165 LINC00518Q8N0U6 118 aa8.3□□□□□ -1.08
PVT1-220ENST00000524165 TRAPPC1Q9Y5R8 145 aa8.3□□□□□ -1.08
PVT1-220ENST00000524165 PLNP26678 52 aa8.29□□□□□ -1.08
PVT1-220ENST00000524165 A6NN06 94 aa8.28□□□□□ -1.08
PVT1-220ENST00000524165 CHCHD1Q96BP2 118 aaKnown RBP8.28□□□□□ -1.08
PVT1-220ENST00000524165 hCG_2014768A0A024R1R8 64 aa8.27□□□□□ -1.09
PVT1-220ENST00000524165 ZNF815PA8K554 130 aa8.27□□□□□ -1.09
PVT1-220ENST00000524165 H0Y8G0 127 aa8.27□□□□□ -1.09
PVT1-220ENST00000524165 NHP2Q9NX24 153 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms