RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 TRAV23DV6A0A075B6W5 121 aa6.85□□□□□ -1.31
NKX3-1-202ENST00000523261 TCTE3Q8IZS6 198 aa6.85□□□□□ -1.31
NKX3-1-202ENST00000523261 LOC107984156A0A0G2JMH3 177 aa6.84□□□□□ -1.31
NKX3-1-202ENST00000523261 ZNF73O43830 326 aaPredicted RBP6.84□□□□□ -1.31
NKX3-1-202ENST00000523261 ARL17AQ8IVW1 177 aa6.84□□□□□ -1.31
NKX3-1-202ENST00000523261 OBSCN-AS1Q96MR7 158 aa6.84□□□□□ -1.31
NKX3-1-202ENST00000523261 A0A0G2JQZ4 141 aa6.83□□□□□ -1.32
NKX3-1-202ENST00000523261 SPANXB1Q9NS25 103 aaPredicted RBP6.83□□□□□ -1.32
NKX3-1-202ENST00000523261 AKR1D1P51857 326 aa6.82□□□□□ -1.32
NKX3-1-202ENST00000523261 C6orf99Q4VX62 202 aa6.82□□□□□ -1.32
NKX3-1-202ENST00000523261 S100A7L2Q5SY68 101 aa6.82□□□□□ -1.32
NKX3-1-202ENST00000523261 FAM236DA0A1B0GTK5 79 aa6.81□□□□□ -1.32
NKX3-1-202ENST00000523261 FAM236CP0DP71 79 aa6.81□□□□□ -1.32
NKX3-1-202ENST00000523261 HERV-K104P63124 156 aa6.81□□□□□ -1.32
NKX3-1-202ENST00000523261 TMEM223A0PJW6 202 aa6.8□□□□□ -1.32
NKX3-1-202ENST00000523261 LINC00587B1AMM8 73 aa6.8□□□□□ -1.32
NKX3-1-202ENST00000523261 PCP2Q8IVA1 136 aa6.8□□□□□ -1.32
NKX3-1-202ENST00000523261 A0A096LNJ9 63 aa6.79□□□□□ -1.32
NKX3-1-202ENST00000523261 TCL1BO95988 128 aa6.79□□□□□ -1.32
NKX3-1-202ENST00000523261 BAGE3Q86Y29 109 aa6.79□□□□□ -1.32
NKX3-1-202ENST00000523261 MAP1LC3CQ9BXW4 147 aa6.79□□□□□ -1.32
NKX3-1-202ENST00000523261 PEA15Q15121 130 aa6.78□□□□□ -1.32
NKX3-1-202ENST00000523261 KRTAP2-3P0C7H8 128 aa6.77□□□□□ -1.33
NKX3-1-202ENST00000523261 HINT1P49773 126 aaPredicted RBP6.77□□□□□ -1.33
NKX3-1-202ENST00000523261 KRTAP2-4Q9BYR9 128 aa6.77□□□□□ -1.33
NKX3-1-202ENST00000523261 DHRS4-AS1Q9P1J3 65 aa6.77□□□□□ -1.33
NKX3-1-202ENST00000523261 NDUFC2O95298 119 aa6.76□□□□□ -1.33
NKX3-1-202ENST00000523261 SMCO4Q9NRQ5 59 aa6.76□□□□□ -1.33
NKX3-1-202ENST00000523261 TAL2Q16559 108 aa6.75□□□□□ -1.33
NKX3-1-202ENST00000523261 DEFB105AQ8NG35 78 aa6.75□□□□□ -1.33
NKX3-1-202ENST00000523261 ANAPC16Q96DE5 110 aa6.74□□□□□ -1.33
NKX3-1-202ENST00000523261 MDN1Q9NU22 5596 aa6.73□□□□□ -1.33
NKX3-1-202ENST00000523261 TEX49A0A1B0GTD5 131 aa6.73□□□□□ -1.33
NKX3-1-202ENST00000523261 HBDP02042 147 aa6.73□□□□□ -1.33
NKX3-1-202ENST00000523261 MPLKIPQ8TAP9 179 aa6.73□□□□□ -1.33
NKX3-1-202ENST00000523261 MYMXA0A1B0GTQ4 84 aa6.72□□□□□ -1.33
NKX3-1-202ENST00000523261 MT-ND4LP03901 98 aa6.72□□□□□ -1.33
NKX3-1-202ENST00000523261 KRTAP5-9P26371 169 aa6.72□□□□□ -1.33
NKX3-1-202ENST00000523261 Q96NJ1 140 aa6.72□□□□□ -1.33
NKX3-1-202ENST00000523261 MIEN1Q9BRT3 115 aa6.71□□□□□ -1.34
NKX3-1-202ENST00000523261 A8MUU9 505 aa6.7□□□□□ -1.34
NKX3-1-202ENST00000523261 COMMD7Q86VX2 200 aa6.7□□□□□ -1.34
NKX3-1-202ENST00000523261 KMT2DO14686 5537 aa6.69□□□□□ -1.34
NKX3-1-202ENST00000523261 Q8N9P0 234 aaPredicted RBP6.69□□□□□ -1.34
NKX3-1-202ENST00000523261 CBY1Q9Y3M2 126 aa6.69□□□□□ -1.34
NKX3-1-202ENST00000523261 EIF4EBP3O60516 100 aaPredicted RBP6.68□□□□□ -1.34
NKX3-1-202ENST00000523261 HRES1P13985 223 aa6.68□□□□□ -1.34
NKX3-1-202ENST00000523261 IGFL1Q6UW32 110 aa6.68□□□□□ -1.34
NKX3-1-202ENST00000523261 SOSTDC1Q6X4U4 206 aa6.68□□□□□ -1.34
NKX3-1-202ENST00000523261 RBM12B-AS1Q9P1G2 102 aa6.68□□□□□ -1.34
NKX3-1-202ENST00000523261 ELOF1P60002 83 aaKnown RBP6.67□□□□□ -1.34
NKX3-1-202ENST00000523261 PMCHL1Q16048 86 aa6.67□□□□□ -1.34
NKX3-1-202ENST00000523261 URB1-AS1Q96HZ7 61 aa6.67□□□□□ -1.34
NKX3-1-202ENST00000523261 RPS10P5Q9NQ39 176 aa6.67□□□□□ -1.34
NKX3-1-202ENST00000523261 KRTAP16-1A8MUX0 517 aa6.66□□□□□ -1.34
NKX3-1-202ENST00000523261 TSPEAR-AS2P59090 65 aa6.66□□□□□ -1.34
NKX3-1-202ENST00000523261 IGLV5-48A0A075B6I7 105 aa6.64□□□□□ -1.35
NKX3-1-202ENST00000523261 COX7BP24311 80 aa6.64□□□□□ -1.35
NKX3-1-202ENST00000523261 NPC2P61916 151 aa6.63□□□□□ -1.35
NKX3-1-202ENST00000523261 Q6ZVH6 145 aa6.63□□□□□ -1.35
NKX3-1-202ENST00000523261 TRAV12-1A0A0B4J245 112 aa6.62□□□□□ -1.35
NKX3-1-202ENST00000523261 LINC00614P0C842 121 aa6.62□□□□□ -1.35
NKX3-1-202ENST00000523261 RHEBQ15382 184 aa6.62□□□□□ -1.35
NKX3-1-202ENST00000523261 IFITM2Q01629 132 aa6.61□□□□□ -1.35
NKX3-1-202ENST00000523261 OR13C6PQ8NH95 151 aa6.61□□□□□ -1.35
NKX3-1-202ENST00000523261 KRTAP3-3Q9BYR6 98 aa6.61□□□□□ -1.35
NKX3-1-202ENST00000523261 KRTAP3-2Q9BYR7 98 aa6.61□□□□□ -1.35
NKX3-1-202ENST00000523261 A8MWP4 228 aa6.6□□□□□ -1.35
NKX3-1-202ENST00000523261 TRBV7-7A0A0K0K1E9 115 aa6.59□□□□□ -1.35
NKX3-1-202ENST00000523261 FABP9Q0Z7S8 132 aa6.59□□□□□ -1.35
NKX3-1-202ENST00000523261 A6NN06 94 aa6.58□□□□□ -1.36
NKX3-1-202ENST00000523261 LEPROTO15243 131 aa6.58□□□□□ -1.36
NKX3-1-202ENST00000523261 ADAMTSL4-AS1Q5T5F5 129 aa6.58□□□□□ -1.36
NKX3-1-202ENST00000523261 C18orf32Q8TCD1 76 aa6.58□□□□□ -1.36
NKX3-1-202ENST00000523261 NOTCH2NLQ7Z3S9 236 aa6.57□□□□□ -1.36
NKX3-1-202ENST00000523261 J3QQQ9 107 aa6.55□□□□□ -1.36
NKX3-1-202ENST00000523261 IFI27L1Q96BM0 104 aa6.55□□□□□ -1.36
NKX3-1-202ENST00000523261 SEC11CQ9BY50 192 aa6.55□□□□□ -1.36
NKX3-1-202ENST00000523261 NMUP48645 174 aa6.54□□□□□ -1.36
NKX3-1-202ENST00000523261 SPANXDQ9BXN6 97 aa6.54□□□□□ -1.36
NKX3-1-202ENST00000523261 SPANXCQ9NY87 97 aa6.54□□□□□ -1.36
NKX3-1-202ENST00000523261 TRBV7-6A0A0J9YX20 115 aa6.53□□□□□ -1.36
NKX3-1-202ENST00000523261 LST1O00453 97 aa6.52□□□□□ -1.37
NKX3-1-202ENST00000523261 COX19Q49B96 90 aa6.52□□□□□ -1.37
NKX3-1-202ENST00000523261 CLEC2BQ92478 149 aa6.51□□□□□ -1.37
NKX3-1-202ENST00000523261 A0A0J9YXY3 114 aa6.5□□□□□ -1.37
NKX3-1-202ENST00000523261 F8WEM9 126 aa6.5□□□□□ -1.37
NKX3-1-202ENST00000523261 MTURNQ8N3F0 131 aa6.5□□□□□ -1.37
NKX3-1-202ENST00000523261 KRTAP2-2Q9BYT5 123 aa6.5□□□□□ -1.37
NKX3-1-202ENST00000523261 KRTAP2-1Q9BYU5 128 aa6.5□□□□□ -1.37
NKX3-1-202ENST00000523261 A0A1B0GWB2 263 aa6.49□□□□□ -1.37
NKX3-1-202ENST00000523261 Q6JHZ5 121 aa6.49□□□□□ -1.37
NKX3-1-202ENST00000523261 LINC00308Q8TCZ7 52 aa6.48□□□□□ -1.37
NKX3-1-202ENST00000523261 S100PP25815 95 aa6.47□□□□□ -1.37
NKX3-1-202ENST00000523261 DSCR10P59022 87 aa6.47□□□□□ -1.37
NKX3-1-202ENST00000523261 LINC00518Q8N0U6 118 aa6.45□□□□□ -1.38
NKX3-1-202ENST00000523261 LITAFQ99732 161 aa6.45□□□□□ -1.38
NKX3-1-202ENST00000523261 H0Y8G0 127 aa6.43□□□□□ -1.38
NKX3-1-202ENST00000523261 HERVK_113P61574 105 aa6.43□□□□□ -1.38
NKX3-1-202ENST00000523261 ZNF815PA8K554 130 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms