RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 GAGE2AQ6NT46 116 aa7.04□□□□□ -1.28
VEGFA-223ENST00000523125 S100A7L2Q5SY68 101 aa7.03□□□□□ -1.28
VEGFA-223ENST00000523125 TRAV23DV6A0A075B6W5 121 aa7.02□□□□□ -1.29
VEGFA-223ENST00000523125 C4orf48Q5BLP8 95 aa7.02□□□□□ -1.29
VEGFA-223ENST00000523125 CDIP1Q9H305 208 aa7.02□□□□□ -1.29
VEGFA-223ENST00000523125 SPINK1P00995 79 aa7.01□□□□□ -1.29
VEGFA-223ENST00000523125 PET117Q6UWS5 81 aa7.01□□□□□ -1.29
VEGFA-223ENST00000523125 ZNF73O43830 326 aaPredicted RBP7□□□□□ -1.29
VEGFA-223ENST00000523125 TIMM17BO60830 172 aa7□□□□□ -1.29
VEGFA-223ENST00000523125 C3orf79P0CE67 100 aa7□□□□□ -1.29
VEGFA-223ENST00000523125 MOBPQ13875 183 aa7□□□□□ -1.29
VEGFA-223ENST00000523125 FP248Q71RG6 208 aaPredicted RBP7□□□□□ -1.29
VEGFA-223ENST00000523125 LINC00308Q8TCZ7 52 aa7□□□□□ -1.29
VEGFA-223ENST00000523125 TTTY13Q9BZ97 58 aa7□□□□□ -1.29
VEGFA-223ENST00000523125 IGLV9-49A0A0B4J1Y8 123 aa6.99□□□□□ -1.29
VEGFA-223ENST00000523125 COA6Q5JTJ3 125 aaKnown RBP6.99□□□□□ -1.29
VEGFA-223ENST00000523125 SSBP3-AS1Q7Z2R9 100 aa6.99□□□□□ -1.29
VEGFA-223ENST00000523125 MUC17Q685J3 4493 aa6.99□□□□□ -1.29
VEGFA-223ENST00000523125 ZNF815PA8K554 130 aa6.98□□□□□ -1.29
VEGFA-223ENST00000523125 JOSD1Q15040 202 aaPredicted RBP6.98□□□□□ -1.29
VEGFA-223ENST00000523125 SPANXCQ9NY87 97 aa6.98□□□□□ -1.29
VEGFA-223ENST00000523125 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
VEGFA-223ENST00000523125 ST20-AS1Q8NBB2 130 aa6.97□□□□□ -1.29
VEGFA-223ENST00000523125 A0A0U1RQV1 116 aa6.96□□□□□ -1.3
VEGFA-223ENST00000523125 RPS29P62273 56 aaKnown RBP6.96□□□□□ -1.3
VEGFA-223ENST00000523125 Q8N377 158 aa6.96□□□□□ -1.3
VEGFA-223ENST00000523125 FAT4Q6V0I7 4981 aa6.96□□□□□ -1.3
VEGFA-223ENST00000523125 KRTDAPP60985 99 aa6.95□□□□□ -1.3
VEGFA-223ENST00000523125 OR13C6PQ8NH95 151 aa6.95□□□□□ -1.3
VEGFA-223ENST00000523125 CBY1Q9Y3M2 126 aa6.95□□□□□ -1.3
VEGFA-223ENST00000523125 C5orf52A6NGY3 159 aa6.94□□□□□ -1.3
VEGFA-223ENST00000523125 LCE2AQ5TA79 106 aaPredicted RBP6.94□□□□□ -1.3
VEGFA-223ENST00000523125 ANKRD39Q53RE8 183 aa6.93□□□□□ -1.3
VEGFA-223ENST00000523125 SPANXDQ9BXN6 97 aa6.93□□□□□ -1.3
VEGFA-223ENST00000523125 SPRR1BP22528 89 aa6.92□□□□□ -1.3
VEGFA-223ENST00000523125 HINT1P49773 126 aaPredicted RBP6.92□□□□□ -1.3
VEGFA-223ENST00000523125 ELOF1P60002 83 aaKnown RBP6.91□□□□□ -1.3
VEGFA-223ENST00000523125 C9orf153Q5TBE3 101 aa6.91□□□□□ -1.3
VEGFA-223ENST00000523125 LINC00518Q8N0U6 118 aa6.91□□□□□ -1.3
VEGFA-223ENST00000523125 SLC25A20O43772 301 aa6.9□□□□□ -1.3
VEGFA-223ENST00000523125 C6orf99Q4VX62 202 aa6.9□□□□□ -1.3
VEGFA-223ENST00000523125 ATOH7Q8N100 152 aa6.9□□□□□ -1.3
VEGFA-223ENST00000523125 DHRS4-AS1Q9P1J3 65 aa6.9□□□□□ -1.3
VEGFA-223ENST00000523125 ASB16-AS1Q495Z4 193 aa6.89□□□□□ -1.31
VEGFA-223ENST00000523125 SCGB1D4Q6XE38 83 aa6.89□□□□□ -1.31
VEGFA-223ENST00000523125 C20orf202A1L168 122 aa6.88□□□□□ -1.31
VEGFA-223ENST00000523125 COX7BP24311 80 aa6.88□□□□□ -1.31
VEGFA-223ENST00000523125 PCP2Q8IVA1 136 aa6.88□□□□□ -1.31
VEGFA-223ENST00000523125 IFITM1P13164 125 aa6.87□□□□□ -1.31
VEGFA-223ENST00000523125 TRBV7-6A0A0J9YX20 115 aa6.86□□□□□ -1.31
VEGFA-223ENST00000523125 MUSTN1Q8IVN3 82 aa6.86□□□□□ -1.31
VEGFA-223ENST00000523125 KRTAP4-1Q9BYQ7 146 aa6.86□□□□□ -1.31
VEGFA-223ENST00000523125 SLC25A34Q6PIV7 304 aa6.85□□□□□ -1.31
VEGFA-223ENST00000523125 Q6ZVH6 145 aa6.85□□□□□ -1.31
VEGFA-223ENST00000523125 COPS9Q8WXC6 57 aa6.84□□□□□ -1.31
VEGFA-223ENST00000523125 LAMTOR3Q9UHA4 124 aa6.84□□□□□ -1.31
VEGFA-223ENST00000523125 AKR1D1P51857 326 aa6.83□□□□□ -1.32
VEGFA-223ENST00000523125 LINC01547P58512 204 aaPredicted RBP6.83□□□□□ -1.32
VEGFA-223ENST00000523125 TAL2Q16559 108 aa6.83□□□□□ -1.32
VEGFA-223ENST00000523125 Q1RN00 199 aa6.83□□□□□ -1.32
VEGFA-223ENST00000523125 XP32Q5T750 250 aa6.83□□□□□ -1.32
VEGFA-223ENST00000523125 HRCT1Q6UXD1 115 aa6.83□□□□□ -1.32
VEGFA-223ENST00000523125 SMIM29Q86T20 159 aa6.83□□□□□ -1.32
VEGFA-223ENST00000523125 HIST3H2BBQ8N257 126 aa6.83□□□□□ -1.32
VEGFA-223ENST00000523125 DEFB105AQ8NG35 78 aa6.83□□□□□ -1.32
VEGFA-223ENST00000523125 TEX49A0A1B0GTD5 131 aa6.82□□□□□ -1.32
VEGFA-223ENST00000523125 A0A1B0GWB2 263 aa6.82□□□□□ -1.32
VEGFA-223ENST00000523125 A6NDN8 102 aa6.82□□□□□ -1.32
VEGFA-223ENST00000523125 SEC61BP60468 96 aaKnown RBP6.82□□□□□ -1.32
VEGFA-223ENST00000523125 SNRPEP62304 92 aaKnown RBP6.82□□□□□ -1.32
VEGFA-223ENST00000523125 HIST1H2BLQ99880 126 aa6.82□□□□□ -1.32
VEGFA-223ENST00000523125 IGLV5-48A0A075B6I7 105 aa6.81□□□□□ -1.32
VEGFA-223ENST00000523125 CD164Q04900 197 aa6.8□□□□□ -1.32
VEGFA-223ENST00000523125 SMIM11BQ8TCY0 68 aa6.8□□□□□ -1.32
VEGFA-223ENST00000523125 LIMD2Q9BT23 127 aa6.8□□□□□ -1.32
VEGFA-223ENST00000523125 KRTAP9-2Q9BYQ4 174 aa6.79□□□□□ -1.32
VEGFA-223ENST00000523125 PRO1933Q9H354 126 aa6.79□□□□□ -1.32
VEGFA-223ENST00000523125 TRAV13-2A0A0B4J235 113 aa6.78□□□□□ -1.32
VEGFA-223ENST00000523125 A4D1N5 150 aa6.78□□□□□ -1.32
VEGFA-223ENST00000523125 A0A0G2JQZ4 141 aa6.77□□□□□ -1.33
VEGFA-223ENST00000523125 S100A2P29034 98 aa6.76□□□□□ -1.33
VEGFA-223ENST00000523125 H7C2G1 150 aa6.75□□□□□ -1.33
VEGFA-223ENST00000523125 Q5XG85 94 aa6.75□□□□□ -1.33
VEGFA-223ENST00000523125 S100A1P23297 94 aa6.74□□□□□ -1.33
VEGFA-223ENST00000523125 NHP2Q9NX24 153 aaKnown RBP6.74□□□□□ -1.33
VEGFA-223ENST00000523125 C9orf92A6NGG3 77 aa6.73□□□□□ -1.33
VEGFA-223ENST00000523125 HSBP1L1C9JCN9 74 aa6.73□□□□□ -1.33
VEGFA-223ENST00000523125 C1orf195Q5TG92 126 aa6.73□□□□□ -1.33
VEGFA-223ENST00000523125 LINC00575Q6W349 94 aa6.73□□□□□ -1.33
VEGFA-223ENST00000523125 S100A6P06703 90 aa6.71□□□□□ -1.34
VEGFA-223ENST00000523125 VAMP3Q15836 100 aa6.7□□□□□ -1.34
VEGFA-223ENST00000523125 PCOTHQ58A44 107 aa6.7□□□□□ -1.34
VEGFA-223ENST00000523125 LCE2CQ5TA81 110 aa6.7□□□□□ -1.34
VEGFA-223ENST00000523125 KRTAP19-2Q3LHN2 52 aa6.69□□□□□ -1.34
VEGFA-223ENST00000523125 hADV29S1A0JD25 119 aa6.68□□□□□ -1.34
VEGFA-223ENST00000523125 SCGB1D1O95968 90 aa6.68□□□□□ -1.34
VEGFA-223ENST00000523125 Q6ZQY7 126 aa6.68□□□□□ -1.34
VEGFA-223ENST00000523125 COX8AP10176 69 aa6.67□□□□□ -1.34
VEGFA-223ENST00000523125 C12orf57Q99622 126 aa6.67□□□□□ -1.34
VEGFA-223ENST00000523125 IGLV8-61A0A075B6I0 122 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms